MmuEX0053456 @ mm9

Exon Skipping

Gene

ENSMUSG00000078768 | Zfp566

Description

zinc finger protein 566 [Source:MGI Symbol;Acc:MGI:1919806]

Coordinates

chr7:30862356-30872178:-

Coord C1 exon

chr7:30872119-30872178

Coord A exon

chr7:30866110-30866236

Coord C2 exon

chr7:30862356-30863637

Length

127 bp

Sequences

Splice sites

3' ss Seq

ATATGTGGGTATTGTTCCAGGTG

3' ss Score

7.22

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

TTCTCCCCCGTTCCAGAAGAGCAGCACAGAGGACCTGTCACCATCAAAGCCATGGCTCAG

Seq A exon

GTGTCAGTGCTGTTCCACGATGTGTACATAGACTTCTCTCAGGAGGAGTGGGAGTGCCTGACTGAGGAGCAGAGAGATCTGTACAGAGATGTGATGTTGGAGAATTACAGCAACCTGCTCTCAATGG

Seq C2 exon

TCCTGGAGTCAAGATGTGAGGCCCAGAAGTTATTCCTGAAGAAGGAGCTGTATGAGATAGAGACAGCGCAGTGGGAGATAATGAGGAAGCTCACGAGACAGGACCTTCAGTGCTCCAGTCTCAGCAGTGCCCGGGAATGGCATGGCCACCGTGAGAGACAGCGCGGATCTCAGGAGAGACAGTTCAGCGAACTGATCATCAACCGTGACGACGTGCCCACTCTCAGTCAGTGCCCATCCTTCAGGCTGCAGCAGATTATCAAGAATAAAGAGAAATATTGTGCAAGTAAAGAAAACAGGGAACACTATAAGCATGGCTCCCGGTTTGCTACCCATCAGATCGTTCGCACCACTGAGAAGCCGTATGAGTGTAAGGACTGTGGCAAGACCTTTAGACACCCCTCAGGGCTCACTCACCATCACAAAATTCACACCGGAAAGAAACCCTTTGAGTGTAAGGAATGTGGGAAAACATTCATTTGTGGCTCAGACCTGACACGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000078768-'2-6,'2-2,4-6

Average complexity

C1*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.155

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=7.6),PF0013017=C1_1=WD(100=14.0),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF097235=Zn-ribbon_8=WD(100=12.0),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6)

Main Inclusion Isoform:

ENSMUSP00000086164