MmuEX6006854 @ mm9

Exon Skipping

Gene

ENSMUSG00000008845 | Cd163

Description

CD163 antigen [Source:MGI Symbol;Acc:MGI:2135946]

Coordinates

chr6:124261405-124267634:+

Coord C1 exon

chr6:124261405-124261725

Coord A exon

chr6:124262439-124262759

Coord C2 exon

chr6:124267320-124267634

Length

321 bp

Sequences

Splice sites

3' ss Seq

TGTTCATGTTTCCACTGCAGATG

3' ss Score

10.88

5' ss Seq

CAGGTGATA

5' ss Score

4.58

Exon sequences

Seq C1 exon

AGGGAGCAGATCTGAGCCTGAGACTAGTGGATGGAGTGTCCAGATGTTCAGGAAGATTGGAAGTGAGATTCCAAGGAGAATGGGGGACCGTGTGTGATGATAACTGGGATCTCCGGGATGCTTCTGTGGTGTGCAAGCAACTGGGATGTCCAACTGCCATCAGTGCCATTGGTCGAGTTAATGCCAGTGAGGGATCTGGACAGATTTGGCTTGACAACATTTCATGCGAAGGACATGAGGCAACTCTTTGGGAGTGTAAACACCAAGAGTGGGGAAAGCATTACTGTCATCATAGAGAAGACGCTGGTGTGACATGTTCTG

Seq A exon

ATGGAGCAGATCTGGAACTTAGACTTGTAGGTGGAGGCAGTCGCTGTGCTGGCATTGTGGAGGTGGAGATTCAGAAGCTGACTGGGAAGATGTGTAGCCGAGGCTGGACACTGGCAGATGCGGATGTGGTTTGCAGACAGCTTGGATGTGGATCTGCGCTTCAAACCCAGGCTAAGATCTACTCTAAAACTGGGGCAACAAATACGTGGCTCTTTCCTGGATCTTGTAATGGAAATGAAACTACTTTTTGGCAATGCAAAAACTGGCAGTGGGGCGGCCTTTCCTGTGATAATTTCGAAGAAGCCAAAGTTACCTGCTCAG

Seq C2 exon

GCCACAGGGAACCCAGACTGGTTGGAGGAGAAATCCCATGCTCTGGTCGTGTGGAAGTGAAACACGGAGACGTGTGGGGCTCCGTCTGTGATTTTGACTTGTCTCTGGAAGCTGCCAGTGTGGTGTGCAGGGAATTACAATGTGGAACAGTCGTCTCTATCCTAGGGGGAGCACATTTTGGAGAAGGAAGTGGACAGATCTGGGGTGAAGAATTCCAGTGTAGTGGGGATGAGTCCCATCTTTCACTATGCTCAGTGGCGCCCCCGCTAGACAGAACTTGTACCCACAGCAGGGATGTCAGCGTAGTCTGCTCAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000008845-'4-5,'4-4,5-5=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features