MmuEX6015038 @ mm9

Exon Skipping

Gene

ENSMUSG00000025461 | Cd163l1

Description

CD163 molecule-like 1 [Source:MGI Symbol;Acc:MGI:2443796]

Coordinates

chr7:147408056-147410095:+

Coord C1 exon

chr7:147408056-147408349

Coord A exon

chr7:147409115-147409423

Coord C2 exon

chr7:147409790-147410095

Length

309 bp

Sequences

Splice sites

3' ss Seq

AGGGATGTCTACCCTCACAGGAC

3' ss Score

5.71

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

ATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCCTGTGCAGGACTCCCTGAGATCATGAATGTGAATGGGGTGGACCGCCTCTGTGGCCTGCATGTGGAGGAGGCCACAGTGTTTTGCCGTGAGCTGCAGTGTGGCCATGCACTCCAGGCCCCCCGTCAAGATGTGGGCGTCAGTAAGTACATGACCTGCAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAGTCATCTGCTCAG

Seq A exon

GACACGTGGAGGCCCGGCTAGTGGGTGGAGAACATTCCTGTGCTGGACGCCTGGAGGTTCTTCGGGGACTGACCTGGGGTACCATCTGCCATGCTGATCTGGACTTGCCCACAGCCCATGTGGTGTGCCGGGAGTTAGGGTGTGGTATAGCTGTGTCTACACTTGGGGGTGCTCAGTTTGGCCAGGGCTCAGGACCTGTGTGGCTAGAAGCCTTCCGCTGTGTGGGGAATGAATCGCTGCTATTCCACTGCCCCCGGGAGCCCGGTCACCACTGTGGCCACGAGCAGGATGCTGCACTCACCTGCTCAG

Seq C2 exon

AGTTCCGGCTGGTCAATGGCAGCAGTGACTGTGAAGGCCGTGTGGAACTCCAAGTGCAAGGGACCTGGGCACCTGTCTGTGCTGCCAACTGGGACCTAGCAGATGCCATGGTTCTCTGTCACCAACTCAACTGTGGCAATGCAGTATCTGTACCTCCAGGAGGACATTTTGGTGATGGGGATGATCTCATCTGGCCAGACATATTTCATTGTGTGGGGACAGAGCCTCATTTGCTTCACTGTGCAGCAAGCACCCTGGGGGCCCATGGTTGTGTCCTGGGGAATACAGCTTCTACCATCTGTTCAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000025461-'2-3,'2-2,3-3=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features