MmuEX6054648 @ mm9

Exon Skipping

Gene

ENSMUSG00000054967 | Zfp647

Description

zinc finger protein 647 [Source:MGI Symbol;Acc:MGI:3052806]

Coordinates

chr15:76741281-76748191:-

Coord C1 exon

chr15:76748065-76748191

Coord A exon

chr15:76747720-76747833

Coord C2 exon

chr15:76741281-76742605

Length

114 bp

Sequences

Splice sites

3' ss Seq

GCTTCCCTTCTCATGAGCAGGAC

3' ss Score

5.64

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GCCAAAGTGACCTTTGAGGATGTGGCTGTTCTGCTGTCTCAGGAGGAGTGGGCCCGCCTGGGCCCTGCTCAGCGGGGCCTCTACCGACACGTCATGATGGAGACCTACGGGAATGTAGTCTCACTGG

Seq A exon

GACTTCCAGGATCTAAGCCTGTTGTGATCTCCCAGCTGGAGCGAGGAGAAGACCCGTGGGTCCTGGATGGACAGGGAACCGAGCTGAGCCAGAGCCTGGGAAGTGACCACTCAG

Seq C2 exon

AATGCAAAGCCAAGGAAGAGAACCAAAACACAGACTTGAATGTGCCACCATTAATCTCAGACGAAGCATCAGCGACGCTGACGGAAACACCGCTGAGGAAGGTTGCTGAAGAACGTTACAAAACAGAACCGAAGGTCTGCCCCAGTCCAAAGCCCATTGGCCCCCAGAATGCCCACGGGTTGAACCCTAGTGTACCCGTTGCCCGACCCCAGACGGCTCCCAGTGTTGAGAGACCCTATATCTGCATTGAGTGTGGAAAGTGCTTTGGTCGGAGCTCCCATCTCCTTCAGCATCAGCGAATACACACTGGCGAGAAGCCCTACGTATGCCATGTATGCGGAAAGGCTTTCAGCCAGAGTTCCGTCCTGAGCAAGCACAGGCGGATCCACACGGGCGAGAAGCCCTACGAGTGTAACGAATGTGGGAAAGCCTTTCGCGTGAGTTCCGACCTTGCCCAGCACCACAAGATCCACACCGGAGAGAAGCCTCACGAGTGTCTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000054967-'1-3,'1-1,2-3=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.667 C2=0.211

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF097235=Zn-ribbon_8=WD(100=10.0),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9)

Main Inclusion Isoform:

ENSMUSP00000041575