MmuINT0032379 @ mm9
Intron Retention
Gene
ENSMUSG00000016493 | Cd46
Description
CD46 antigen, complement regulatory protein [Source:MGI Symbol;Acc:MGI:1203290]
Coordinates
chr1:196868094-196888607:-
Coord C1 exon
chr1:196888547-196888607
Coord A exon
chr1:196868208-196888546
Coord C2 exon
chr1:196868094-196868207
Length
20339 bp
Sequences
Splice sites
5' ss Seq
AACGTAAGT
5' ss Score
10.74
3' ss Seq
AAATGTTCTTTTAACTACAGAAA
3' ss Score
5.84
Exon sequences
Seq C1 exon
TTGTTGGAGTTTTTATACTTTGTCTCATTGTGCTCAGGTGTTTTGAGCACAGGAAGAAAAC
Seq A exon
GTAAGTATTTTAAGTTGTTATTCATGCAACTGATTTGTCCTTTGCCTTGAGCACCCTCCCTTTCCAAGTAAGCCTGTAGTTATGTGCCCTACAAATTGCATTTCTTTGCTAAAGTGTGGTCAACTATTTTGACATCATTGCAGCATAAGGATCTGTGTGAAGTTGCTTTTCTAGCAGCTATTATCAGTAAAAGAAAGTTTTCTATAGGATTTGAAGTTTAAGCTGCTTAGTGAAACAAGATCATTATGAAGCGTTCCCTATTTTCTAAGTTCAAAAGTGGCCAAAATTAAACTTGAAATATTTCACTGATATTTTTATGTTGTAGTCACTGTGATTCTTATGAGAAAAGCTTACATTTGTCTAACTTGACTGGTGGTAAGAAGCTATGTAGGGGTCTGTGGGTTTTTTTTTTTTTATAATTTAGAGTTATTTATTAATGTTAACCGGCGTGATTAAGACTATCACAATTTGATTTCTTTCATGTTCTCCTAAATTTTTTGACTACTAACTCATTCATTAATTAGTATTAGAAGTACCTGAAAGGCTAAAATTAGAATAAAGTGACTTTATTTTTAAAGTAAATAAATTTATTTTTAAAATAAATAAATTTAAATAAATAAACAATGACTAATATATTAATAAATACATTTCATATAAATAAATAGGTTGAGTTTTTTATAAGTGAAAAATATACTTCTATCATATAGCCCAAACTTGATTAATTTAAAAGGAAACAGGAAACAGGGCACTCTATTATCTTTTATCTGTGTTCTACCTATATAAAGACTAAAACAAAGGGAGATTAAAAGAGAAAAAATTCAAAATACATATACTTCAAAAGAAATGGGGCTTTACCAGACATCCGGGCACCTTCCCGGCCAGAGGATAGGTGTCCGCCCGGCCCGGGAGGTCTTTGCCTGAGCATCAGCAGCAGACATTTTGGTTCAAGGACTCTGCCGAGAGTAGTCTGCACAGGTGAGAGTCTGGACTACAGAAGCTAACAGCTTCTGTGACAGGCAGAAGCAACACAGCTTCTGGACAGGTCCTGTTTTGGGCCTTCATCTTTGGCCTGGAGGAGGTCTGAACGCCAGATATCTGTGCACCTTCCCTGTAAGAGGAGAGCTTGCCTGTAGAGAGTGCTCTGACCACTGAAACTCAGAGGAGAGAGCTAGTCTCCCAAGTCTGCTGATAGAGGCTAACAGAATCACGAGAGGAACAATCTCTAACCAGAGACAACTAAATCAACTAACTCCAGAGATTACCAGATGGCGAAAAGGTAAACTTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAGAACCCAGCACTCCCACCTCGCCCAGTCCAGGGCACCTCAACACACCCGAAAAGCTAGACCCGGATTTAAAAGCATATCTCATGATGATGGTAGAGGACATCAAGAAGGACTTTAATAACTCACTCAAAGAAATACAGGAGAACACTGCTAAACAGGTAGAAGACCTTAAAAAGGAAGCACAAAAATCCCTTAAAGAATTGCAGGAAAACACGACCAAACAGATGATGGAATTGAATAAAACCATCCAAGACCTAAAAATGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCAACGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGCTAGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAACATTCCATAGAGAACATCAGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAACTCAAAACATCCAGGATATCCAGGAAAACAATGAGAAGACCAAACCTACGGATAATAGGAGTAAATGAGAATGAAGATGTTCAACTCAAAGGGCCAGCAAATATCTTCAACAAAATTATAGAAGAAAACTTCCCAAGCCTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACAACAAATGCACTAAATAAAGATAGAATATTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAGGCCTATCAGAATTACACCAGACTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACAGACACTATGAGAGCACAAATGCCAACCCAGGCTACTATACCCAGCCAAACTTTCAATTACCTTAGATGGAGAAACAAAAGTATTCCACGACAGAACCAAATTCACACATTATCTTTCCATGAATCCAGCCCTTCAAAGGATAATAACAGAAAAAAACCAATACAAGGATGGAAATCACATCCTAGAAAAAGCAAGAAGGTAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAACTTTAACAACAAAAATAATAGGAAGCAACAATTACTTTTCATTAATATCTCTTAATATCAATGGACTCAACTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAACAGGACTCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGGAAAAAGATAGACACTACCTCAGAATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTCTGAAGAAACAAGCTGGAATAGCCATTCTAATATCTAATAAAATTCACTTCCAACCCAAAGTCATCAAAAAAGACAAGGAGGACCACTTCATACTCATTAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTATGCTCCAAATACAAGGGCAGCCACATTCATTAAAGAAACTTTAGTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACATACCACTTTCACCAATGGACAGATCGTGGAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGATCTAACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTCTTCTCAGCACCTCATGGCATCTTCTCCAAAACTGAGCACATAATTGGTCACAAAACAAGCCTCAACATATACAAAAATATTGAAATTGTCCCATGAATCCTATCAGATCACCATGGACTAAGGCTGATCTTCAATAACAAATTAAATAATAGAAAGCCAACATTCACGTGGAAACTGAACAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAGGACTTTTTGGAGTTTATTGAAAATGAAGCCACAACATACCCAAACTTATGGGACACAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCCGAGTGCCTCCAAAAAGAAACTAGAGAGAGCACACGTTAGCAGCTTGACAACATACCTAAAAGCTCTAGAACAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGCGAAATCAACCAAGTGGAAACAATAAGAACTATTCAAAGAATCAACCAAACGAGGAGCTGTTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCCAGATTCACTAGAGGGCACAGGGAAAGCATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAAGAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGAAGAACCTGGATGAAATAGACTAGTTTCTAGACAGATACCAGGTACCAAAGTTAAATCAAGATCAGGTTAATGATCTAAACAGTCTTATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAAACAAACAAACAAACAAACAAAAAGCCCAGGACCAGATGGGTTTGGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTATTCCCAGTTCTTCACAAACTATTCCACAAAATAGAAACAGAAGGTACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCTAAACCACAAAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAGTACTCCATAAAATTCTTGCTAACCGAATCCAGTAACACATTAAAACAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGGAAATCCATCAACGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCATAGAAAGCATTTGACAAAATCAACACCCATTCATGATAAAAGTCTTGGAAAGATCAGGAATTCAAAGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGTCAACATCAAAGTAAATTGTGAAAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGAGAAGGCTGCCCACTTTCTCCCTACCTATTTAACATTGTATTTAAAGTCCTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGACACAAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAGCCTGATAAACAGCTTCAATGAAGTAGCTGGATATAAAATTAACACAAACAAGTCAATGGCCTTTCTGTACACAAAAGATAAACAGGCTGAGAAAGATATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTTTGAAGAAAGAAATTAAAGAAGATCTGAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATATTATAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGTAATCCCCATCAAAATTCCAACTCAATTCTTCATCGAATTAGAAAAAGGCAATCTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCAGCATGCCTGACCTAAAGCTGTACTACAGAGCAATTGTGATAAAAAACTGCATGGTACTGGTATAGCGACAGACAAGTAGACAAACGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCAAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATTTGATCCATTCCTATCTCCTTGTACTAAAGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAACCCTCGAAGATATCAGTACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTTGCTGTAAGATCGAGAATTGACAAATGGGACCTCATAAAATTGCAAAGCTTCTCCAAGCAAAAGGCACCGTCAATAAGACAAAAAGGCCACCAACAAATTAGGAAAGGATATTTACCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCCAATAACCCCATTAAGAAATGGGGCTCAGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTAAGACCTCTGGTGAGTGGACCACAGTGCCTGCCCCAATCCAATCGCGTGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGACCTTAAGACCTCTGGTGAGTGGACCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCTTCCGCTCGACTCGTGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACACCCGCAAGGGTCCACACAGGACTCCCCACGGGACCCTAAGACCTCTGGTGAGTGGATCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTCGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACACCCGCAAGGGTCCACACGGGACTCCCCACGGGACCCTAAGACCTCTGGTGAGTGGATCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGACAGCAGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTAAGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGCGTGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCTTGATCTGGGGCACAAACCCCTTCCACTCCACTCGAGCCCCGGCTACCTTGCCAGCTGAGTCGCCTGACACCCGCAAGGGCCCACACAGGATTCCACACGTGATCCTAAGACCTCTAGTGAGTGGAACACAACTTCTGCCAGGAGTCTGGTTCGAACACCAGATATCTGGGTACCTGCCTTGCAAGAAGAGAGCTTGCCTGCAGAGAATACTCTGCCCACTGAAACTAAGGAGAGTGCTACCCTCCAGGTCTGCTCATAGAGGCTAACAGAGTCACCTGAAGAACAAGCTCTTAAAAGTGACAACTAAAACAGCTAGCTTCAGAGATTACCAGATGGCGAAAGGCAAACGTAAGAATCCTACTAACAGAAATCAAGACCACTCACCATCATCAGAACGCAGCACTCCCACCCCACCTAGTCCTGGGCACCCCAACACAACCGAAAATCTAGACCCAGATTTAAAAACATTTCTCATGATGATGATAGAGGACATCAAGAAGGACTTTCATAAGTCACTTAAAGATTTACAGGAGAGCACTGCTAAAGAGTTACAGGCTCTTAAAGAAAAGCAGGAAAACACAGCCAAACAGGTGATGGAAATGAACAAAACCATACTAGAACTAAAAGGGGAAGTAGACACAATAAAGAAAACCCAAAGCGAGGCAACGCTGGAGATAGAAACCCTAGGAAAGAGATCTGGAACCATAGATGCGAGCATCAGCAACAGAATACAAGAAATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAACATCGACACAACAGTCAAAGAAAATACAAAATGCAAAAGGATCCTAACTCAAAACATCCAGGTAATCCAGGACACAATGAGAAGACCAAACCTACGGATAATAGGAATTGATGAGAATGAAGATTTTCAACTTAAAGGGCCAGCTAATATCTTCAACAAAATAATAGAAGAAAACTTCCCAAACATAAAAAAAGAGATGCCCATGATCATACAAGAAGCATACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACAACAAATGCACTAAATAAAGATAGAATATTAAAAGCAGTAAGGGAGAAAGGTCAAGTAACATATAAAGGAAGGCCTATCAGAATTACACCAGACTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACAGACACTAAGAGAACACAAATGCCAGCCCAGGCTACTATACCCGGCCAAACTCTCAATTACCATAGATGGAGAAACCAAAGTATTCCACGACAAAACCAAGTTCACACAATATCTTTCCACGAATCCAGCCCTTCAAAGGATAATAACAGAAAAGAAGCAATACAAGGACGGAAATCACGCCCTAGAACAACCAAGAAAGTAATCATTCAACAAACCAAAAAGAAGACAGCCACAAGAACAGAATGCCAACTCTAACAACAAAAATAAAAGGGAGCAACAATTACTTTTCCTTAATATCTCTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGGAAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGACTGAAGAAACAAGCTGGAGTAGCCATTTTAATATCGGATAAAATCGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGGACACTTCATACTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTACGCACCAAATGCAAGGGCAGCCACATTCATTAGAGACACTTTAGTAAAGCTCAAAGCATACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCTTCAAAGGACAGATCGTGGAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGACCTGACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTCTTCTCAGCACCTCACGGGACCTTCTCCAAAATTGACCATATAATTGGTCACAAAACAGGCCTCAATAGATACAAAAATATTGAAATTGTCCCATGTATCCTATCAGACCACCATGGCCTAAGACTGATCTTCAATAACAACATAAATAATGGAAAGCCAACATTCACGTGGAAACTGAATAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTTTAGAGTTTGATGAAAATGAAGCCACAACGTACCCAAACCTATGGGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCGCTGAGTGCCTCCAAGAAGAAACGGGAGACAGCACATACTAGCAGCTTGACAACACATCTAAAAGCCCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACAAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAATAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGATCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACCACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTAAGGAGGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTGGAAGGAGCAATTTGCAAATTTGTCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACTTCTGGCGGAATCACCATGCCAGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGATCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAGGAGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACGGAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATAGCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTATTGAAAGGACGCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCCAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAGCTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGGAAAAAAAAAAAAAAAAAGAAATGGGGCTCAGAGCTAAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGTAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACTGATAAAAAGGACACATGCTCCACTATGTTCATACCAGCCTTATTTATAAAAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAAGAATGGATACAGAAAATATGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGATATTCCTAGCAAAAGGATGGACCTGGAGGGCATCATCCTGAGTTAGGTAACCCAATCAAAAAAGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATATAAGATACAATTTGCTAAATGCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTCCCATCTTCTTAGCATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAATTTGGAGCTGAGGCGAAAAGATGGACCATCTAGAGCCTGCCATATCCGGGGATCCATCCCATAATCAGCTTCTAAATGCTGACACCATTGTACACACTAGCAAGATTTTGCTGAAAGGACCCAAATATGGTTGTCTCTTGTGAGATTATGCCGGGGCCTGGGAAACACCGAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAAGGTCCCCAATTGAGGAGCTAGAGAAAGTAAGCAAGGACCTGAAGGGATCTGCAATCCTATAGGTGGAACAACAATATGAACTAACCAATATCCCCCAGGACCTCGTGTCTCTAGCTGCATATGAATCAGAAGATGGCCTAGTTGGCCATCAGTGGAAAGAGAGGTCCATTGGTCGTGCAAAATTTATATGCCTCAGTAACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGGGGAGTGGGTGGGGGAGCGTGTGGGGGACTTTTGGGATAGCATTGGAAATGTAATAGAAATAAACAACGCAGAAAAAAAAAAAAGAAATGGGGCTTTAAAGGAGAAGGGGTATTTAGTCCCTAGGTAAAAACAGGGATTTACACTATTAAAATTAAATGTAGCAAATTTACATATAATGGAAGATTTGGAATAAATCTTAGGACACAGATTACATTAGTGCTTTGAAGTTTCTGATAGGATTTAGGTAATTTCATTTTTTCTTGTCACTTTAAAATCATCCCTAATAAATATAAGACCCATGTTTCATGTTTCCTTTTAAATTAATCAATCATTGGGTCTGAGCTATATGATAGAAATATATTCTTCACGTGTAAAAGGCTCAATCTTTTATTTATTTTTAAAATAAAGTCACTTTATTCTAACTAACTTAAAAACATCAGATAGCTAGATTGTTGGCCTTTGTTTGTTTGGTTTGTTTTGTTTTGGTCTACTTTATTGGGTTCTTATATCTACCATCCTTCCAACCCTTATTCCACTCTAATCCCTTTCAAACCCCCAACACTAAATAGGAGAGAAAAAAGGTTAGAGGGGAAAGGGGGCATAGATCTCTTTAGACTACTTCCTGCTGATTAAGGGCTTGAGTTCCTTGCGGCAAATCCAGTCTATGCTGGCAGGAACTCTAATTTCTTCTCCTCTTTGCTCATGACTACCTGAGAAACTGCAGCAGCAGGAACCAGCAGCAGCCTCATTAAAGCACCCCACCCACTTCAGGGAATATACCCTCTTGAAAGTTCCCAGAATTCCAAATATCACACACTTGAAGAAACTATCAGCAGCTGGCAAAACCATCCCCTGCTAGTGCAGGAGGCAAATCATAGTCACACCTGCTGCAAAGCAGCCTCTTATCCCACACCTGGGATTGAAACAAGACAATTCACATAACTAGAATTTTAAAGAAACCAAAATTCTCACCAGATTGAGGAAGCCACTCAAACACTTGTCCAGACTTGCCAGTCCCAATCTCTATACATTTTAGTGATCTTCTACACTATTAGTAAAACCATACTAAAGCAATAGAGCTTTGTTGAGGTTTTGCATTTTCTCTGTCAATCACATTTTTACTCACCCACCACCAAAAAAGGGGGAGACCTCTATGACAAAGTTAAAACTGGAAAAAGCAAATAAATTTGGAAGCTTTTAAATATTACTTTATCTGTTTTAAATATCTGTAATTCTTTAATTTGTATCTAAAATTTTATATTTATAGAACTTGATCTATTGGTTATGTTTTTAAACCACAAGTATAAACAATGTCAATAAGTAATACTATCAGTAGTTTTATTAATTAAAAGGCCTGTTTAGAAATAACTTCCAAAGAAAGTAAAACAAAGTAGCTTTTCACTGCCCTTTGTTGTTGTTGTTTATAACATCACTCGATGAAAATTCATGATAGATCCCTAAAAATATTAATATACTATACAGACTGTATAGCTACCAGTTAATGGGTCTTTTCAAGCTAAACAATTATCTGGTCATTGTCCTCACAAATGGTTCAACAGTGACTTGAAAGTCTAAAAATAATCTGTTTTGTAATTCTTCATGCTCATGTGTAACACCACAGTGGTCTAACAGAAAATTAAATATCTAAAAATGTTTTGGAAGAGAATTTGTCTTCAAACAGTGTAATGCAGTCACTATACAGAGTATTACGACTTGAGATAAAGTGCCCAAGAATGGTGTGGGAAGTAGTTAGTTGCCTCTTAATTGCCACTGAGCTAAAATATAAATTGTATTGATAGTCTTTTAGAATATAATTTGCACCTTTTAATGACAAGATTCCAATATACCATATGATGGTTAGATTAAAAGTTAGGTTTCCCCATAACTTATCATACATAAAGCATTGGGTCAATCTCCAGCACACAGAAAAAGTAATTTAATTTTCAGAATGCTTGCCTTCAGAACCCTGAAGTCCACATACAGATGTTGTTTGGGTATTTCTGTTGCTTGTATCAGGGAATATCTCCCTATGTAGCTCTGGCTAGCCTTGAGCTTGTGATTATTCTCCCAACTTGCCTCCCTAGTAGTAATATTCTTAAATTCCAAAGAGTGAGATGCATTTCTTCAACATCCTGAGCAATAAGGCTTATGAATCACCTGGAGATCTTCTGATCCTTTGGTCTGGCATAGGTCTGAGACCTACTTTTAAATGCATTCCCAAGGGTGCTGTTTGCTCTACTGTATAAAATTATCCACACTGTTGAAAATTTAAAAATTGCTGTCATGCTGTCTTTTTCTTTTCTGATATTTAAGCTCGTTAAGTCTTTCTTCTTATTATTCCTGTTTTTCTTATTCTTTTCTTTTTCTGTTCCTTTCTTTTTTTGAGATAGGGTTTTACTATGTAGCTCTGAGTACTTTTGAACTCACTTTGTAGACAAGGCTGACCTCAAACTCAAGAGATCCATCTGCCTCTGCCTCCCAAGTTCTGGGATTAAAGGACACACCACTACATCCAGCCATTACACACACACACACACACACACACACACACACACACACATACACACACACACACACACACGTAGAAGTGTTTTCTCTACATGTATGTAAATGTACATGCTTGGTGCATGAGGCTAGAGTAGGGCACCAGATACCCTGCAACTGGAATTACAGTCAGTTGTGAGCCACCACATGGTTTGAGGAACCAGACCTAGATCCTCTACAAGAATAAGTGCCTTTTACCATTCAGCTATCTCTCCCACCCCACCATTCCTCATCTATGTATAACTTTTTCAAGAGTGGGTTAGCGGTAGTTTTTATCTTTTTAAGATATTTAAAAGATAAATATTTTCTATCTTTTATGTGTTATTTTCTTTTTAAGATTTATTTATTTTATATATGTGAGTACACTGTCTCCATCGTCATACAAACCAGAAGAGGATATTGGGTTCCATTACAGATGGTTGTGAGCCACCATGTGATTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACTGATGAGCCATCTCTCCAGCCCTTGTACTATTTTCTTAATCATGTTTAATCTCTATAATCTTTTCCCTCAATGTGGCTTTCATTTCCGCTAAGCTATCAGGAATAATAAATTCATTTTATCCTCTAATCTCACTTGACAACAGAGAAAACTGCTGTGAGAAAATATGTAGATTTTCCACACACAGAAATCAATCAGATCTGCACTAGACAACAAGTGGTGCCTTTTATTTACTTCAATTCAGATCTCAACAAGTCTCACTTTGAGATGTCAGTCCCAAGCTCAGTTATTTTACCTGTGCTTCTGACCCACCAACTATAAGGTACATTTACCACAATTAATTTGCTAGAGCCACAGAACTCAAACTGGTTTGAACTGCAGAGGAAAATTGTACGTCAGTGAAGAAGAAAGAAAGACTCCTTGCTTTCAAGGGAACTACCCCTAGAAACCTTTTGTCCACCTGTCTGGAGTCTCCAAACCAGTCTTTTCTGCCCCTCCTTTAAATAATCATGATTAATTAGGTCATTTAGGCTTCAGTTCTCCTTTTCAGAGGCAGTATGGGTGAGTTTCAACCCTTGAGTACTTTCTAGCTCTTTTCTGAAGCTTCTAAGATGTTCCAGCCATGAATCAGTTCATTAACACACAAAAAGACATCTTGAAGAGTCTAAGGATATCAAGAGTTGTTGGCTACAGAACAATAATAAAGACCAAATATATATTTCACAATACCACACTGCTGGCTAACTTCTTATACAAAACAATATAAAATGTATATTTTTTTCTATTTTGGGGAATAACTGGAAAAAAGCATAGATGTTCTCAAATTGCTGTTAAAGTATCGTTTTAAAAACTGGATTTGATGTAAACAGATATTTGTGATAACTTGAGAGCATAATGATTCTTCTCCAGCCCTCATCACAAACATTGTACAAGTAATACTTTAAGAGCATTAGCATCATTTAAGTTTGTAAAAAATAGCCAAAAGTATTCTATAGTATTGGTTATTGTCTCTCATGTATAAGAAAAGGTTAGAATTTGGACTGGGATGGTAACTTCTCAGTAAATTATTTGCCATAAGCATGAAGACCTGAGTTTAATTCTCAGGATCAATATAAAAAGCCAGGTGTGCTGGTCCATGCTTTGTAATCACAGCAGTGGGGATGCAAAGATAGGACCGATTCCAGGGCTTGCTATTCAGTTGCTATTCAGTCAGACTAGTCTTTCACATATACAAAAGAATAAGTTAAGATCACTGACATGTCTCAAATTAGCATAGTCCACACACGTCTCCATTTCTCTTCCCAATCACCTTTGTTCACTTTCTCCTCTTGGAAGCAACATACTGCTTGACATTAATCTTAAAAGTCTACGTGCTTCTGACCAGGTGCTTTTTATTTAACTGTTTCCACTTGTGAATTTTTAAAATATATGCATGATTTTCTTTACTTCATCTAAGATTTCTCTTTAATTACATCCTGTGAGAGGTAAGAGTTATTCCATAAATGAGTATTATTTGCATAACTCATGTTTTGTTTTCCATAATAGTAATTTTCTTTGTTTTCCATTAGATACTACTTGGTATAACTTAAATTAATATTGATTGATTTAATTATTTTATCATCTGTAAGTTGTCTTATTAAAAACTGTGGTCAAGACTGATACCTGAGGAATACCACAACATAGTGCAGAAAAGTCAAGAATCCAGTGAATTTCAGCATTATTTTTTCTACTTGACCCAAACATATGAGCATTGAATATGCTGTTCTACAATTTTTTTTTTGGTACCAAAGAATACATAGGAAAATATTGTTAGGAAAATAGTTGTTTAGAAATCATATAACAAAATTACTACTAACCCCCAAATTTAGAGGTCATGCTGTAAGTTACATAAGGATCATCCTGCACATGATTTTAATCCCAGCAATCAAGAGGCAGAGGCAGGCAGATCTAAGTTTGAGGCCAGTCTCATCTACATAGTGAGTTACAGCCAAGGCAACATAATGAGACACCCCTCCCCACCCCACCCCCCAAAAAAACAAAGAGAGAAGAAAAAAAAATGTATGGAAAAGAAGAATGTATGCGAGCCGGGCATGGTGGCACACACCTTTGATCCCAGCATTTGGGAGCCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCTCGAAAAAACAAAAACAAAAACAAAAACAAGAAGAAGAAGAATGTATGCACAGATACTATACTCAGTTCAAAGTCAAGATGTCTTAAAAATACTTGATTTGTCATAAAGTTGATTTCCAACATAAGAGATTTACTATATAGCTTTTCTCCAGTATTAAAATTATATAAACCTGTTTTTCTTACAAAATGTTGTTCTTTGAGTTTTTACATTGTTTTGAATAGAGTAGCTGAGAGGTAAACACTGAACAGCACTGCCAAATGTGCTTAGCTGCTGGGTGGCATGTGATTTTAGAGTTAATGTTACATACTTGAGTGAGTGAGAATCCTGAAATTTCAGTTGATAAGCCTGGAACTCACCTTTACTCAGTAACTCCTTAGGTCTCTCTCCTGTCTCCCCTAATACCTGCTCCTTCCCCCTTGTAAGTGGCACTCCTGTTGTCAGCTGCACTGAAGGAGCTCTGGAGGCAGGTCATACTCAGGTAGAACAGAGCTTGACCTCCACCAGGCCCCAGCCCACTCAGGCTCTGAGGAACTACTGCTGAGAGAAGAAACCGTCATTCCTGATGAATTGCCTTTTCTGAGGTGTATTTTCACTTTTATGTTTAGTAGCATAGAGGGGCCAAGGAGACATCCCCTTGAGAAGATTGTGAGTCCGAACTGAAACTGAGCGAGGGTGAACCCTGCTTTGAGTATAAACACCTACAGTCACTCTGAGTGAAACTCCAAGCCTTTTACCCTCCAAGTGGATACTTCAGGAAGATAACTCTTGGACAGAAAAACAAACAAAACAAAAAAACCACCTAGGAATTTGATTAAGAAAAATTGAAATCTGTACTCATTTTCACATTCTTAAAAAAAGAAAAAGGTAGCAGTTGTACCTATACACGGTGCTATACTTAAAAATCATAGCATTTAAAAAAGAGGCCAAAGATAAGTTAAGACAAAGAACTACTAATTGTTTAAAGACAAGAAATGGCTTTACTGTTTTAAAACTTAATTTAAAATATTTTCAATCAAATATTTTATTTTGAAAATAAATTTACCTTTATAGCTTGATCTGCTTCAAATTTAACCTTCAAATTACTATTTATATTTGACACATGTCTGTATAAATATACATTTTATTTTTATCAAATACTTTGTCAGTTATATAAATATGAGGAAAAGTGCTTTTTAAAAAATTGTCCACATGGCAGAGAAAAAGGCATATTTGAACTTGAAATGTTCTTTTAACTACAG
Seq C2 exon
AAATGTATCTGCAGCAAGATGAAAATCTCATGTGTGGAAGTCATTACTGTTCCATTTTTGAAAACTGGATCTTCAAGTCTGGCAAACGCAAAATTATATATTTGCAGGAGCTTC
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000016493-Cd46:NM_010778:10
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.057
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: