MmuINT0043239 @ mm10
Intron Retention
Gene
ENSMUSG00000047363 | Cstad
Description
CSA-conditional, T cell activation-dependent protein [Source:MGI Symbol;Acc:MGI:1925867]
Coordinates
chr2:30595040-30608943:+
Coord C1 exon
chr2:30595040-30595074
Coord A exon
chr2:30595075-30608159
Coord C2 exon
chr2:30608160-30608943
Length
13085 bp
Sequences
Splice sites
5' ss Seq
GAGGTTAGG
5' ss Score
4.36
3' ss Seq
AACGCATCTCCCTGTCCCAGGTG
3' ss Score
8.33
Exon sequences
Seq C1 exon
GGGTAGGCAAAGCCCGGAGAAACTGCTGAGATGAG
Seq A exon
GTTAGGATTTAACCTTTAAATTCTGGAGCCACCGGAAAGCTAGGGGAGACAACCGGCGTCGGTGCTAATGAGGCTGGGGGCGGGGGCCGGGGGCACCGAGTCGGGGTCAGGTCCCCGGGCTCCCCCGAAGGCCCGGGGAACCCTCAGCCCGCGCCTCCGCCATCAGACTGGGAGTGCCTCTGATTGGGCGGCTCGGGGGCGGTGGGCCTTCTCTCCGCCCAGCTGGGGGTGGTGTCTTCCGGGAAGTTGAGGGGTCGCACCTGGGAGGGAGGGGGAACTATCCGGTGCTCTAGGGGTTCCAGGCCTCTCCTCGACTGACCCTGTCCTCACCCACATTCCTCCATCTCTCTGCCTAGTACTAATAGGATTTGGCTTTGGTTTTGCTGCCCACCCCTTCAGCTCCTCCATCCCAACTCCTACCCCTGGTCCCTAGTCCCTTCCTTCCAGATCTGGACAGGCCTCACGCAGGCTGGTCCTAGGTTTCTCTAGAGATAGACCAAAGCTGCAGGACTAGAGGGGTGCTGCTGTCCTCCCTGAACCTCAGTTTCTTCATATGTAAAATGGGGGTGGTGATGGTAGAACCTGTTCTATGTCTTCACAGGTGACAGGGATTTTGCAAGCAGTGGTTCCCCTTGATTATCCAACCCAAGGTCTCCCCATGAGTGAGCTCATGTAAGGGTCTGCCCTGACCCACAGTGAGCTCCTGGGTGCCTCCAGCAGTTTCTGCTACCCTCTGTCTCCCCTGCCCCTCCTCTGAGCATCTTCTCTGGAAAGTATCTCCTGCCCCAGCCCTCCTGCTGCAGCCTCTGGGTTCCTGACTCACAATCAGACTGTATGCCCAAGGAGGACAGGAACCACAAAAGCCCATAGCCCTTACAAGGAAATATCAAATTCCTTGCTCTGTGGTTTAAGAAGCCAGACAGAGGCAGGGATCTCGGGCAGCTATAGGCCTGAAACACGCAGATGTCTCATCTGATAGGCAGCCAGCCATCCTCAGCCCTGTGGGGCTGGGGCTTCTTATACAACACCCAGGAGATGCCACCCTTGGGCTGGGAAGATGCAAAGTGCCTGGGGGGCGGGGCGGGGGGAGGAAGGAGTAGCTCACACTGGAACTGGCTCCTGACTGTGATCACCCCACAAAGATCTCTGCAGTCCCTACAACACCCCTAGCAAGTGTTGTTGTTATTGGCAATCTATGATGGGGAAACTGAGGCAAGGAACTGAGCAAGGCTTGAGAGTGCTCAGACCGGAGCCACCCAGGCCTCCTCTCCCAGGCCGTGGGATGAAGATGGAAGGGAGTCTGAGAGATAGAGAAGGTGCTGGAATAGCTAACCTGAGACCTTCCAAGCCCAGTGAGCCAGGGGGGTCTTGGTTGAACAGCTTCTCCGTGACTTCCAGTGTCATAAGCTCTGACAGTCCTGTAACTACCTCCCACCCCACAGTTCTGTTTCTTTCTTATCCTAATGAAGACCCCAACAGGGTGACAGGTGGCAGCTTCCTGTGGGGCATCTGTGGCACCCAGTGCCAGCCTCTGCTTTGGCTTGGAAGGTCATCCTGAGCCGATGTCACCAGCCCCAGAGCCCATTCTCACCCCTGGGTTATTGACCACCACTTCTTGTCAGTCCTCTGCCCCAGCCCCAGCCCTGCTGGCCAACAAAGAGTCAAGAAGGGTAGCTCACTTTCCAGGAGGCAGCCATAGACTTGTCCGTCTGAAGAACCCAGCTTCGGAGAGCTGTGTGACATAGCTGCTTGAGACCACCCTTCCCTTGTCCATTTGACTGGTTTCTTCCCCACTCCCCTTCCGGAGCCTTCTCACCCCAACTATTTCCTTGCTTACCTGGAAATTGGGTGGAAGCTGACCTTTGCATGTGCGTGTGCATGTGCGGTGTGCGTGTGCGTGTGTGTGTGTGTGTATACACATATGTGTTCAAGGGCACATGTGCACATGCCTTTACACAGAGGTATCTGCCCCAGTCATCCTCCACCTTGTCTTTTCAGGCAAGGGCTCTCACTGAGGCTCACTGACTAGCTCAGAGACTAAAGTCACTGACAGGCGTTGCTGCTCCTGGCTCTCATGTGGGTGCCTGGGATTCAAACTCAGGACTTCATGATTACACAGCAAAACCTTCACCAACAGAGCCCTCTCCTCAGCCTGCCATTTTGTGTGTGACCCGATTTAATTTCTATCTTTGTCACTGTGATTCCCATGTACAGAAATGTTGGCGGTGTGTATGGCCTTGCTGTGTGGTTACAGGCCAGGGTCACTCACACGAGCTCTTGCTGTGACTGGTCTCTGAGGGGTCTCTGACTCTGGGGTGGGTGATGGCTGGAAACTGAGAGCTGGAGGTCACGGAGCAACCTTGGAGCCTCTCTGCACCTCTTGGTGGCCGCCCTGGCTCCTTCCTTTTCGGCATGCAGACAGGTTGATGGAAGTTGGATTCACTCCTGGAAGGAGTCTTGCTGTCTGCCTGGTTCACAAGCTGATATCACAGTGCCCGGGGACAGGGAAAGGGTGTGACCATCATAAGTAAGGCCTTAGGTGTGTCATTGAGGAACCTCACAGGGGCACACGTGCAAACTAGGGCAGCTGTGCCATCAGTGGCTGAATGCGGTGTGACATAGGCCTCTTTACATGTCCATTGCTGGCCAAGGCCCTCAACCACATAGCGTGTGGCTGACCAACAATGGTTGCCTGCGACCAACCGACCCGGAACTTTTGCAGGTTGTCCTTCCGTCTAATCAAGTGTATGGCCATGTCTCTTTGTTAGCAGGCAGGGCTGATTGAAGGGGGAACGGGCCTGGGTCTGCCTTCCAGGACTCTGGGCTGGGGCAGGACAGGGCCTTGGCTGGCCTCCTCTTCCTTTTTCTCTGGCCCAGTGCTATGTTGGCCACTGTGTTCTTGCTTGGGAAACAGGGGTTAGAAAGATGTCAGTCCTTATCCTCACCCTTTAAGAAAAGGTGGCTGTGGTGGTGGTGGTGTATGGTGTTAATGGTGTGGTATGGTGTTGGTATGGTGGCATATTGGTGTGGTGATGGTAGATGATATTATGTGTTTTGGGACAGAGTCTCACTGTGTAGCCCAGGCTGGTCTTGAACAGGGTGGCTCACACTGTGGGCATGTGTGGGCTCAGTCTTAGCTGCTTTTCTGATGCAGTGAGAAGACACACAGACCTGAGCAACTTCAGGAAAGAAGGGCTTACCTTGGCTCACAGTACAGCATTTTGGGCAAGCCAAGCTAGCAGGAGCTTGCAGCAGCTGTTCACAATCAGGAAGCAAAGGGCCATGAACACACAGTGGGACTCTTTCTCCACTTTATAAAGTCGGTGGGTGGAACTTCCCAATCCCACCCCCTACAAGAGTGCTTAGAGGCTTATCTCCTAGGAGACTGACTGTTGAGATGACAATTTATGCTAACAATCAGGGAGGGTAAACCCTCTACCTGCCCAGTTTGGCCTCACAATGTCCCTGGGGAGTGTAGTGATGGGGACTTCCATGTCCCAGGCTTGGAGGACCAGCACATGCCACTGTAAAGGTCCTACTGTGTGAGAGCTGAGGCTGATGTGCTCCAGCCCTGCCCCTCTGCTGCAGACTTCAGCCCTGAGCTTGGCAGGAAACAGCACTGGAGTTTGGAGTTCCAGCCCCTGGTGCTGACTGAGGCTTGGGCTATAAACAGGAACTAGGCATGCCTCTGCCCTAGAAGAGGTCTTTCCTGGGAGCAGAGACTGGCTGGAGAAAAGGCTTAGTGGTTGAGAGACTTGCAGAGGATTCGGGTTCTGTTCCCAGCACCCACAGCAGGCAGCTCACAACCACCTGTACATTAGAGAGAATCTGGTACCCTCTGGCCTCTGTCTTCCACAGGCATCTGCATGGGACCTCATGGGCTCTTACACAGATATACAGAAATTTAAAAATTAATTTGGACAGGGTGTAATGGCATGTGCCTATAACCCAGCACTTGAGGGGTAGAATCAGATCTCTGGCTACATAGAGAGATCCGGTCTTTTTTTTTTTTTTAAAGTTAGGCTAGACCTGGTGGCACACACCTTTGAACCCAGCACTCAGGAGGCAGAGGCAGGTGGATCTCCATGAGTTTGAGGCCAGCCTGGTCTACAGAGCGAGTTCCATGATGGCCAGGGCACAGAGAAACCTTGTCTAAAAAGCCCAAAACCAAAATTCCCACCTGTGAGTTAACATCAGTTCTTAGGTTCCCTGTTACAGTGGGTGGGATCTGTCACTTATTTCCAAAGTGAATTCCCACTGGGGTCCAGTTGGCTCACCCTTCCTGTGGTCCCTAGACCATAATCTCCTACATATGAGAATCGTGTGTGTGTTTATGTGTGCTCTTAGTGCATGTGTGTACATGTTTGTGTGCACATGTGTATGGATAAGAAGGTTAAAGGTGAACAATGCGGTCTTCCTCAATCACTCTTCACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCCTGTAGTCTTTTGCCTCCATGGGCCACTATGCCCAGCCTCCATCTTACTTTTTGAGAGAGGGTCTCTCATTGAACCTGCAGCCACTAACCAGCTGGCCAGGCTGGCCAGCCATCTCTAGGTATCCTCCTGCCTCAGCTTCCCAGAGCTGAGATCATAGCTGTGTACACTGCCATGCTTGGGTTTTCCCCTGAACACACGTGCAGTAGACTCTTGGCTGGTTTTCTCTTCCTTGGATTCTGTCCAGCTGTGCTCTGCCTCTAGCAGCCCCAAGGTAGGCTCATCCTCATCTGGGAGGAGTCAAGGGCTGAGTTACCGTCCCCCACTCCCCCCACCCCTGCACCCTCTCTCAGCTTAGCTCCTCCTAGAGGAGGCTCAGACACAGTTGCTACCATGCTAAAAAACAAAACAAGCACAACCCTAGTCGGGAAGGTATAGCCACCACAGGGTCTCTGAGAGGATGTGACCAGCACAGATGTCTTACCAGAAAGCTCCCTAGACTAGGTACCACTAGAATGAGCCATTAGGTGGAGAGAGGCACACAACTTCTCCACAGTCTCTATGGCTACCCATCTAGGACGCCTTCCCTCAGCAGGTTTCAGGGAAACCCTGCAGGGTCCTTCTCAATACTACTTGCTGCTGTTTGACCTTCATAGATGAGTTCCTTGCCACTCAACCTCTGGGTCCCATTACATTTTTCCTGGGTTTCAGGTGCCTGAGAAAGATCTGATATCTCTATCTGATATCTCTTCCTCTTCCTCCTCTTCTCCTTCCTCCTCTTCCTTTCTCCTCCTGTCCCCCTCTTCCCTCTGTGGATAGAGTCTCCAGTAGCCCAGCCTCTAGTTCACAGTGTTGCTGGACTGACCTTAAGCTCCTCCCCCGCCTGCTCCACCTCCCGAGTGCCCGGCTTTGCCCTGCCCTGGTGTGGGGCGCAGGTCTTTACTGCTGTCGGTGCAGCTACAGTACCACTCATTTGGGTGTCTCCCCTTCCCAGCCTGTCTCACCACGACCTTTCTATGGCTATCCATGATGAGTGAGGGAAGCAGAGAGAAAACAGAGGCATGCAACCGCCTCTCAGGAAATGTAACTGGGCGCCCCTGGTAGAGGCTGAGCCGGGACAGATTGCCTAGGAGGGGAGAGGCACCTTCAGCCAGCCTTTCCAAGGCTCATGCCGGCCCTCCCCAACTTTTTTTTGGTGTGCCTCGGGTCAGATGGGGATCCTTCCCGGATTCTGCAGCAGTGGGCTGGCTAGGGTTGTAGGGTTGGGTGGGAGACCCCGACCCAGCGGGGACAGAGGGTGGGCTGTTTGTGCTTGTTTGGGGCCCCAAGGGTTCAATATTTGCCGCTCCCCACCTCACCCCTGCTGCTGCCCCAAGTCCACGGAGGTGTGGGGTGTGGAGTGGCGGGGGGGGGGCGGGGGGGGACTGCCAGCCTCTGGGATCTTCGAGGGAAGGCTCCGGGTCTAGAGAATCCTGGGATTCTATTCCAGGAAGGAGAGAGCAACTCCAGGGGAGAATTATACTTGTAACAGAAAAGAAAGCTCTCTGCCTTCTACAGTGCAGACAGAGCTCCGTTCCCACCCCCACAAGGCCCCAGGGACCCGAAAGAATGTGGTTTGCTGAGCGCTGCCTTGCCTCCCTGAAGGGGGGTGGATTCGGCCTGGAAAAGTTGCGTGTGAAATGAATTTTTCTCTATCCTATGCCATTTTCCGGTGGGTCGTGTTTGAAGACCATGGTTGTATTCCCTCAGAGAAATGTCCCTGAGTGTTTTGGAGGCAGCTAGCTAGCGTGCACAGGGATGGGGACTCCAGGATGCATGGTGGGATACCAGAAAACACCCTTCTCCCCAAGGGGGCAGAGTCAAGACAAGACCTCAGGAGATCACGTGACAGTTAGGCTGTGTGTCCCAAAGGATTCTGGTGGCAGAGCCCCAGAGCTTCTGAGGAACACAGAGCTGCGGGACAGCTCCCCTGCCCAGAGGGTGCTGCTCACACAAGGAGTCCAGGTGGTCTGCCTGCATTCTCTGAGAGTGCTTCCGAAGCTTAGCCTTGGGGTGGGTCAGTGTGCCTGGGAAGGAACTTTAGGAAGCTCGTGGATGACCCTTCTCTCTGTGTCTGCATTAGTCACCGACCATTGCATAACAAATGCTCCCCCCCCCCTTAAAACAACAAGCACTTTTTATCTCGGTCTCAGTGGATCAGGAATTCAGCTGCAGCCCCGCTGGCTGGCTGTCCCCAGCCCGAGGTCACTGAGGCTGCAGTTGTCCGAAGGCCCTTCTGAGCACTGAGTTTGTGCTTCCTACAGACTTGTCTCATGAACCACGGATCTGTTTGAGTTTCCTTCCAAGATGGCAGCTGGCTTCTACCAGATTGAGCAATGTAAAAGAGCCTTTTATGACTACCTTGGAGAGCTCTTAGTCAGCCCCTCACATCCTACTGGGTGCCCCAACCACCCTTACTCACTGTGGAAGGGGACAAGCCAGCCTGTAAATGCCTGAAGGTAGGGATCATTTGGAGACCATCTTGGAGGCTGGTGACCATGGCAACCATCACTTCAGCATGAGAGGTATCCTTCCCGGCACACATGGTTGGTTTCTTACCATTTACTGGATATTAGTGGCTAGAGTGTTAACCTGGGATGTGAAGGATATGGAAGAAACGGGAATTTATCAGCTGAGCTCAAGGGAACCACAGCAGTAACAATCACACAGGGCCACCTCTCCAGCTGTACTCTACCAGGCCATCCTCACCCCTAGGCAGCCTGTTCCATCCACATTCCCAGGTTAGACCATTCATTTGTAAGCAATGCATGAAGTGAGATTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTTTGTGTGTGTGTGTGTATATATGTGTGTGTGTTCACTGCTATAGTCATGTTAGAAGCCTGGGACAGGATTGGAACAGAGGGAGCTGGGATGAACCCAAGCAAGTGATAAATGCTATAGATGAGATAACATATTCATTGATTGCACAGGGCAGTGGTGGCCATGCCTTTAATTCCAGCACTCTGGAGACAGAGGCAGGCAGATCTCTGAAAGGTTAAATACATAGACAGGGTAAGGAGTTAGGGCCCATACTGACAAGCTAGAGTCTGGTAGGCTGTGACAAAGGGCCACATAGACAAGGGTGGGGTGGGCCCTGGCCCCTGGCTGAGAAGCCTAGTGGTAAGTGAGTTGTGTCTCCAGGTGCTCACCACAACTGTATCCTAGGTTGAGCCTTGTTGATCACTGACTGTGTAGCTCAGGCTAGTGAATTCATGTCCTCAGTTTCCCATCTATAAAATGGGTGATACTGGTATTGTGTCCGCCCCTCCCTGGCCCCCCGCATTGTGGCTCTCACTCAGAGGCAGAGTCTGGACTCATGATTGCTTCCCTAGGACAAAGCCTACAGTGGTTACCATCTTGACAACACTCCAAGTTCGAGGAAGCCATATGTCTAAGTCCTATTGATTGGAAGGGATCATCCCAGGAGAAAGAGCTCAGTGCCCCCTGTGCCAGGGATGTACAGGCATGGGGACTGCCAGCTTCTGCCTGCCAGTCTAGGCTCAGCATGATTCTGGGCCAGGGAACATCCTGGGTGGGTCTCCAGAAGACCCGCACATAGACTCCACTCTGGCCTAAGTTTGCTGTCCCAACAAACAGACTAGGGAGGAGGCTGGCTACAGAGGCTGGAGCCTGCAGCCTGCCTCTGCCTGGGAGCGTGCTTGGGAAGCAGAAGGAACTGGGGGGAAGGCCTTAAGGACCAGAGGCACCTGCTTTCTGTCAGGCCTGTGTGGGAGCCCACAGAACCGCAGATTGAATTTGCCTTGTGGCTCTCAACCTGTCCTGGAGAGTGTGGGCTAGTGAGGGGGACCCAGAGCCCTCATGGGTGTGCATGTGGTGGGGTCAAAGACCACCTCTACCTAGCCCAGCAAAGGAGCTCTCTATTGTCTCTGTGCTATGTTGTTGTGCTGAGTACTGTTTCATCAAAAGGTAAAGGCTGGGGGCGGCTTGGTTGGTAGAGTATCCTGCATACACAGACAAAGCTCTGGGTTCGGTTTTCCAGCACTGCATAAACCAGAGGTGGTGGCACGTGGCTGTCATTCCAGTACTCAGGGATGGTACAGGCAGGAGGGTTCAAGGCCACCCTCAGTTATGTAGTGAGTTTAAGGCCATTATGGCTCTGTAGTAAATACATTGTCCCCTATTTTTCTTTCCGGCTCTTTCCTTCATGCCTTAGTAAGTAAAGGACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGCTGCATAGGTTAATTGTCCTTTCCAATCGGCTTCTGGTTTTCTGAGCTCTGACTCTGTTTGTCTAATGAGACAGAGAAGCCACAGACTGACTGGAACACAGTGGGGGTGGGGGTGGAAATGGGGTGGCTTCCCTGTTCCTGTGACTACCAACACTGAGGCTGGAGGGCATGCTGGCTTCCTCCCTGACCAGCCTGTACAGGGTAGGGGCCTGGGCCAGTCGCTCTCGCTCTCGAACTCAAGTTTCCTTCAAGACTCCAGGAGGCTGTGTGCCTCAGGGCTCTCGGCTCTCTCGGCACTTGCTAACATCTTCCTGTGTCTCCATGGTGCATCCTGGGACTCTAGGTGTATACAGATGTGCTGACCTCTCCCAGAGGACCAGCCAGTCTGGAGCCGGGTGGCTACCCTGGCTGCAGGAGAGTGTCCACCAGGATGCTGTGGAGTGTATCCCGTTGGTGGACCTTCGGTGTCTTCAGGTGACCCTCAGTGTATTGATCTGTTCCTGAATCCCCTGCCTCCCACCTCCACACACTAGGTTGCTGTTTTGTATTTATGCACACACATGGAAGGTAAGGCCAGCCTGGTCCTCAGGCCCTGTTTTTGAGACAGGATCTCTCCCTGGGACCTGAAGGTCCACAATTAGGCCCAACTGGTGGGCCTCTCATCTACCCCTAGAATTACAGTAGAATGCTACCAGGCTTGGGTCTCTGATGTTGGTGTTAGGGCTCCAGGTCCAACTCTGGTCTCCGGTGTAGCAAAGGCTTTGCTGGCAGAACCTTGCCCAGGCCCTGAGTTACTCTGTATTGAAGAAACTTGGCCATGTGGTTCCCAGCTCAAACCTCTGGCCTTCACTTCATAAGGTGAAAGGTGGGGGTGGGGAGTTAGAGGTGTACTCTCCACCTGGGGATCACCACAGAAGATGTCAATCTTATTCTGTCCTAAGCTCCCTAAAGTGATCACCTCTGGATACGCGGAAGCCCTCCGAACTTAGTGGGAACCACTTCCACCAGTTCAGGCAGAGCACTATAATTGGGGAAGTGCGGTGGGTCCCCGCACCCCCTCTACTACACCGCCCAGGGCCAGCTCTGGAAACTTTTGAGTGAGTTTCTGGCAGACAGATTGACGACTTGTTGATCCAGGTCAGTCACCTGACCGGGTCACCAGAGCCTGGGAAGGCCCCTGGCAGCTACGACTTCCCTCCCCGGGGCCATGGGCTCCAGCGGCTGGGAGCGAAGGGGTTAAGCGTTTCTGGCGGCCGCCTGCTGTCTGCGGTAGTTCCCCCCTTTCCCGGCTGCTGCTGCAGGGGTTGGTTGGAGAAGAATGTTTGTTATGCGGAGCCGGGAGGGAAGGAGGACCGGAGTAGGGGGGCAATACAGTGGGGGCCGGCAGGCCTTAAGGCCGGGCTCCCCCAGGTTGAGCAATAGCCCCAGGGTTCCAGTAACTTCGACCCCCCACACCCATCCCCCCCATCAGCTCTCCTCACTGCCTCCACCTCGGGCTTTTGAGGCTCCAAAGTTTAGGCTTCTAAGGGAGGCAGAGGCCACCCCAGCAGAATAGGCACAGCCCACCTAGGTGTTGCGGGGCCACAGCCGTGGGCAGGGCCTTGTTGGTTCTCTTGGCTCCGGGCTGCTACCCACGTCGGTGCGCAGAGGTCACCGTCCCCTGCCAGGATGCTCAGAGCCTCCACAGGATAATCTCTACACAGCCCAGGTTCTCAGGAGCAGGGAGGCTCCCGCTGGGCTAACCGTCCCAATTTCCTTCCCTTGAAGGTGTGGAGAATCGCCTAGCACCCTGTTCCTTGCCTCTGGGACAGTGAGGGGAAGCAAGGGAGGCCAGTCGGGCTAACTTAGGAAGTTTCTGGTTTTTTCTTTCCTCCCTTCCTCTGGTATTTCTTTCCAGCCAAGATCTTGTTAGGTACCAAATATTCACCCGCAGGCCAATGGGCCTCAGGCTCATTTCTTTCTCCTAGCCTCATGGCTCTTCTGGTGAGAGTCCTCCTACACTTCGGGGGAGGGGCCGCCCCTCTGTCAACAGCCCAACTCCATCTCCAGTACTTTGAGGCTCACTAGCCTTCGCACCTCCAGCCCAGCCTGAGTTTCCTTATCTGCACAGTGGACTCCAGGAGGTGGGTGCTGGCACTGCCAGAAATGCTAGACCACTTTCCTCTTCTGGCGAGTGGCGGGGGGGGGGGGGGGGGGGGCAGGGATAGGGGTGGATGGAGTTGGGGGATGTGTCTGCTCAGGTGCCCACATCCCTGCAGAAACGCACAGCTGACCTGTCTTTTGGGTCACAAGCCCTCTAGTGCTGAGGTGGAAGTTCCCTTGAGAGTCAAAGCCCTGTGTAGGTCCGGAGGTAGGAAAGAGAGACTTGACTCTGTCGACAAAAAAAGGATGTGTAGCTCAGCGGCCTCTCATACATTTCTCCTGCGGTCAGTTTTCATTTGGCCCTCACTCTATAGACAAGGGATCCTCCTGCCTCTGCCTTCCTAGTGCTGGGATTAAAGGCACAGGTACGAGCCACCAGACTCCAGTTGGGTGCAAGTGTTTTATACGTTTGGTCTACTCTAATCAAACATCACACTGTAGGGGAGGCGTATTACACTACTTGCTTAGAAAACAGAAAGGTTAATGACTCTCCTAAGGTCACACAGCTTGAAGAGACCCTCCAGAGACCCCAGTGCTTGGGTCGCCTTGGGCTTGTGGCTCAGCACAACTCAACCACCCTAGTCACAAAGATGGAGCGAGCACTCCCAGCTCTCACAGAAGCAGAGCCTCCCGGCAGAGGGCATATAGCAGGATGTACAGGGCTCCCTTCACTGCCCCTGCTTCCTTGGGGCTGGGAAAGCCCAGTGGACAGACAGACAGAACACTGACTGGCATTCCCCCCACCCCTCAGTCCTGGGCTGCGCGGCGTCCCCACCTTCTCTGGAGCAGGTTTCCTTTAAGAAACCCAAAGATTGATTTCCTGGCAGGCTGTGTGCGAGGAGCCGTCCAAATGGTTTGCATGTCTGCATTTTTTACTGCTCCGTTTAATATGTATGCAAATGCCGGCCCTGCACCGCCCGGCTGCAGTCACACGCGGAGCCCATTAAAGCGGCCTTCCCGGGTGCGCGCCTCATTCGAGGCGACGGGCTCGGCGACCCTGATAGATGGGGTGCTCGACGGAGACAAATGATGCCTTTGTCATTTCTTTCTCTCCTTTGAGAGCGGGGTGGAGCCTGGGAGCCCACAGAGGAGATTTAAATATATGCAAAATTGTTTACTGGGTTTGGGGTCCAGTGGGGACCAGAACCACACTGGGAGGTAGATGTCCGGTTCCCCAGGGGAAGCTAGTCTGGAGCCTGCATGATGATGTGAGCCTGAGTGAACAGATGCCTCCCAGCAAGGAAGCTCCCCCAAAGCCCCAGCTTTGGGGGCTGTGACTGTATGGGAATAGCATCAGCTAGTCCATGCTAACCTGTGAGGTGGGTCTGGATCCCACTCATTGTGCAGATTAGGAAACTGAGGCCCAGACAGAGCCTTTCACTGGGAAGGGGGTAGTGAAGCAAGTGGGTGGGGTGTTGTGGCTCTGTGTGTCTTGTCTTTGACCTTCACAGTCCTTTCCCAGGTTGCTCTGAGAGTTTGTTCTCAACCAGGGTATGTTGGGGCATGTGTGCTTGTGTGTGACTCTGGCCAGCCTCACCCCACACAAACCTCTTAACCTTTCTCTCCTCTCCCCAGTCAGTCCTTACCTGCCAAATTATGTCATTCTAAGACTGGACTCCCTGTTTCTCAAGTGTCACATAAAGCTAAATCTGGGTTCTCAGAGCTGCGAACCAGAGCCTGGGAAGAGAAGGCTCTGAGCATAGGATGCCTAGAGGATTGTGTCACCGTGTGTGCATATGTGTGTGTGCGTGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGCACAGTGCACAGGATGTACCTGTTTGAGTAGCATGTGCATGTGTGTGCTATGCATGCAATCATGTGTGTGCTTATGTGCCATTGTGTTGTGAGTGTGCTGCTGTGTCCCTGGGGTGTGACCCTGTCCATCAGCACCCTTGTGTCAGGGTGGAACGTACACATTGCAGGGTGTGTGCGTGCTTGCATGGTGGCTCTGTGTTGTTATTCTGTGTCTCCTGATCAGCCTGACAGGCTGGGAGAGTGGTCTGTGTGTTTCTGTGCATGGCCATGGGCACGCTTGTGTCAGAATGGTGTGTGCCTCTGCGTCAGTGTACCACAGGGTCAGGTCGTGTGCCTGTGGCCATGACAGCAGCTGAGAACGCATCTCCCTGTCCCAG
Seq C2 exon
GTGGGGCCTGCCTCCTCTGCTTCAGACTTGCTTGGAGTTCGGAGCTCAGCTGAGCCATAACGGAGGCTCACAAGGAAGAGATCCTGTGAAGCACAGAGGATGTACGTTAAGGAGTTGGGGTGTGGCCAGATATCTGCCTGGGGAATTCTGTACTGGAAGGCTCTCCCAGCTACTCAGGCAATCCTGTGCCTGTCTCCATGGCTTTCAGGAGCATCTCTTGGGTGACCTGGCTCACCACATAGTTTCACTGAGAGCCATCATGAGTTGGTACAGCCAGTGGCCTGCCTTTCAAGTTCAAGGTCAGCCTTAGCGATGGAGAGAGAGAGTTCAAGACCAGCTGGACTACAGGGGAACTGTCTCAAAACAAACAAAAATGAGCTAAGAGGTTAGGAAGATGGCTCAGCAGATAAAAGCATTTGCCAACAACCTGAGTTCCATCCCAGGAACCTATGAAAAGACTGAGGGACAGAACGAACTTCAGAAAGTTGTCCTCTGACCTGCTCATGCACACAGTGGCAGGTATGCATACACACCCCTACACACACACATACACACACACAATTTTTAAAATGTAAACCAGCCAGGAGGTATCACTTCTCACATGTCAAGATGGCCACAGTCAAGAGAAAGAGAACAACAAGTGTTGGCGAGGATGTGAAGAGGATACATTGAATCAATGGTTCAGTCACTATGGCAACAGGATGAAGCATTGACCCGATGGTGCGGTTGCTACGGAAACAGGATTCTGGTTCCCCCCAAAAGAAATAAAAGAAAAGAACTACTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000047363:ENSMUST00000102853:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.039
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types