MmuINT0094092 @ mm9
Intron Retention
Gene
ENSMUSG00000030922 | Lyrm1
Description
LYR motif containing 1 [Source:MGI Symbol;Acc:MGI:1921169]
Coordinates
chr7:127039806-127053476:+
Coord C1 exon
chr7:127039806-127040086
Coord A exon
chr7:127040087-127053184
Coord C2 exon
chr7:127053185-127053476
Length
13098 bp
Sequences
Splice sites
5' ss Seq
CAGGTGATG
5' ss Score
5.99
3' ss Seq
TGTTTCTACTCTGCCCACAGATC
3' ss Score
11.44
Exon sequences
Seq C1 exon
GGAAAGGGGTTGGCTTCCCAGGGCCAGGGATGAGATGCCGGTGTGGGGTTGCTAGGAGACGCGCCTGTATGACCCCAGCCTCGCGAGGGCGACTGGTGTCATCGCTGCTGGCCTCGGGAGACCTGCCTAAGGGAACTGGCACGTGGGAGAGATCCTGCCTGGGACCCTTCAGACTTTTCGATTATAAATGGAAGGCGACGGGGCAGTTGTAGGAGGCTGGAGAGGTGCTGGCCTTGAGAAAGGCCACCCAAACGATCCCGGATGTAGGAATCAGACTTCAG
Seq A exon
GTGATGATGAAGGCTAGTTTCATTACTAAGATGAGCAAATGACAAAATGAAGGAAGTCTTGTTTCTGAACTTTTCATTAATAAGTAAATGAATGCAGAGAATAGCAGCTGCCCCAGAAGCTGAATGGTGTGGTGAGAAGGCCTCTTCCAGGTTTAAGAGGAAAAGAGAATGGGAGAAGGAACTGCCTTGTGGGTAACATTTTAAACAAAAGGCAGACGAGAAAGAAGTCTTGGAGTTGCAGAAATAGCAAGGTTTTGGCCTTTGTATTACTTCCCTGAAGTGTAATGAATGACCAAACCTTAATTTACATTTAAAAAAATTGCTGCTGGATAAAAGAAGGTAGTTAAAGGGCTGTTGCTAAGGCCATGAGAGATGACAGTGGTGGAAACATGGAAATTAAGAGAATTGATTCATAATGTATTTGGGAGCTTGAGCATTCCAGACTGAATGCTGAACTGGATACGAAATGTATGGGAGAATGTGAAACCAAAGATGTTTCTCTAGAGAAAACAGTTTGGGAAGGAATCTCCTATGCTCTCTGGAACGTATGTCCAGAGTCATTTTACAGCCCATGAAGATGTCCAGAAATGAGACGGACAAGCTGGAAGACAAGTCATGGTTGGAGATAATAAATGTGGGGTTTATTCCTAGACCCTGGAATAGGTAGTAGATGAGAAAGAGCCCCAAATTCTTTAGATCTCACATTTAGAGACCACCAAGAAGGGTACAAGCCAGTAGGAAGCTCAATAAGAACACCTCAAAAATAAGGAGTCCCCCTTAATATCGTTAAACAATAGTATCCACCCTCACAATCAGTGAGAGTCACCTTTTGAGGGCCTCAAATCTCTTCCTGCTCTCCCAGCTGTCAAAGCTTTTGGACTTGGTGTACAAGAATGTGTGTGCACTCCTGATTTCCTTGATAAATGTTGGTTTACATGAGCCCATTGGGATCTATTTTGTCATATCTTCGTAGGAACACCTTATACGATACCAGCCCTGGAATTCTTGTTTGGTTTGTTGTGTGATTGTGCATGTTTTCTTTCTCATGTGTTATAGACCGAGCTAGCCTCAAACTCAAGAGATCCACCTGTCTCTGCCTCCCTGTCTGGAGGGCTGGAATTAAAAGGTGTGCACGACCACACCCATCTCAGCCTTGGAATTCTTACAAAAGGAGTTTTGTCCCTGCTGCTACCGATGCCACTCACATAGTGAATCTCAATGAAAAGGGTATCTGAAGGGCTGGGTTTCATTCTTGGATCTGCTGGGTGGCCTTGGAAAAGGTCCTGTTCTTCGAATTGATAGGGTTGGCCTAGATTAAAAGTTGCAAGCTGGCAAGACAGATAATGCCTGCAAGCATAGTGTTCAGCCCGCAGCATGATTTAAATTCTTCTTTCTTAGACTATGCTTGCCAGTTTTTAAAAATTGAACATCAGAATCCAGATTTTTGGCTTCATTAGGAAAATCGGACAGTCTGGCAACACCAGTCTGAGGTTCCTAGAATCCTACACAGCTGAAACTGCAGAGTTGCTTATCCTTTGTTTGTGGCTTATGCCCCAAGTGAGCCATAAGCATCTCCCCTCACACCCACTCCCAAGCTGACATTTGATTTGTAATTGACCTGAGAACCTTGCTGTCTGTATGTAGCTACTTAACACATGTGACTAAGTTTAAATAACAGTTCTTAGACACATATTCCAGATGTTCAGTAGCTGCATGTGGCTGGTCTCTGCCCTGTTGGGTAAATCAGACAGAAGAGTTTTACCATAAACTGTTCTTTTGTTCAATGTTGGATTGAAACACTGAAAAAAAAAAAATTAAGGCCTCTCTGAGTGCCAATCATTCCTCACTCGTAAAGCCAGACAATCATTGTTTCTGCTCTTGGGACAGGCTAGTGAGGAGCCATTTGGACTGATAAATAAAATTCCTCAGTTGGTAACTAGAGAGTCCTTGGAGAATGTTCTAAAAACAGGTCCCTGGTGCAAAATGCTGTTGTCTTTCAAATAGTTGGCTGTAAAGTCAAATGCAAGAGATCTCCAGCTGTGACCAGTGTTGTCACCAAAACCTTGTTTGTTTTTGTTCTTCTGAAACAAAAGTGTTTCTCTTTGTAGCCATGACTGTCCTAGAATTTGATCTGTAAAAATCTGGCCTTGAACTCCCCAGAGCTGGGAATAAAGGTGTGGCAGGACACACCCAATGTCCACCTAAGACTTTGTGCAACTTTCTAATCTAGTTTCTTACAAGATGTCACAAAGGAGGAATTTAGTGTGTGGGCTCTCTGACTTTCCTACTTGCTCTGAAGGGGCGAAGATTCTTGCTGGAGAATTGTCGTCTCTACCATTGGCTTGTTCCCAGTTTCTCCCTTATATCTGTCACACACCTGACTTTGGATAACTGGTTTTGAGCATCTCTGGCTAACTTTTGTAGGCAAGAGGATTTCTGTAAGTTGTATTCAAAGTTTCAGGGCAGCCAAAAGCTAAATAGTGAGACCCTGTCTCAAAAGACAAACAAACAAATAGAACCAAGACTTTACAGTAAGTGTACTGTGCTGCTAGGCAGTGATATTGAATGGATTAACTGTGTTAAATACATTTTCCATTTAAGATGATTTTAGTTTAGGAGACTATCACAACCTAGCACTGTCTGCAAGTTAAGGAGCATCTATGTTTAGGATACGTGTTTGCCTCCTATTGCTTTGCTTTGAATAGTTACTTTAGAAATCTTTCTAGTATTGGTGTTTTAGATTGCCCCTTTGTTCTGATGAAACATCCCATGTTTCAGAATCTTTTCCTGGGTCCATCTTTCATTCTTGGGTTTTTTGGTTTAAGTTGGGGTTTTTTGGGTTTTGGGCTTTTTTGGTCTTTTTTTGGCATAAAACAAATGCTGTTTCAGAGAATCATTGTGGTATGAAATATACTGAATGAGTGTATCCTGAGAATTGCACAACTGTGGTACTACTTCCCTCTTCAGATTCTAATAACCAGAAAAATCTAGGACAGGAAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTAGGGAATGGAAACTAAGAGACCAGGAATCTGTAGGGCACAGTTTCACTTGAAGATTGTTCAGTTGTTGTGACAATAAAATCATTTAGAGTACCAGCCAGTGTCTGACAAAAAGCAGGGACTAGATAGAATAGCTCTAGGAGAAAAGAGCACCAATAGTATAGAGTTAGCGAGAGATAAAGAAGAGACACGAGACATAGGAAGGAAAGCTTTGTCGTGCTTCAGTGCTGGCACCTGTGTTAACATTTCCAGTAAGAAGCATGCATTGTGGTCTGAAGATAAGCAGTGTCTCCAGCAGGGTTATTTACTTATACTGAAGAACAATAGCCCTTTACTGTACAGGGATTAGTAATGATCAGAGGGAAATAGCTTTAGGAAAATCCATTACTACCACAAAGCAACAACCTCAACCACAGGCTACATACTTTTCCATTCTCTGCAGACAAAGATAACCATAGATAAAAGGCTCACTATTCTCATTTCCTCCTTTTCAGGTAAAGTACACCTTTACTTCCTAGTGCTCAGTATTTTAATGAAATATCTCATGAATAATCCTTACAACTCTGAAAACTGTTCTGTGGCTGCATATTACCTTTTAAGAACCTGAATTAGGAGTGAAGCTTCATGGTACAAACCTGTAATCCCAGCTGCTCCTGAGGATCAAAAGTTCAAGGCTCTTCTTGGATAATAGAGTAAGTTCAAAGCCACTTTGAGCCAACTTCATGAGACCCTATCTCAAAATGAAAAGGAAAAGGATGAGTAGGGGATATTGTTCATTGTTGAAGTGTATGCCTTGTTTGTTTAATTCCTAGGGCTGCCAAAGAAGAAACTCTCGGCACTCTGAGAAACTGAGCCACAGGCTGAGCCCAGTGAACATGATTATTTGTGCATTATCAAAATCATTTCAAGGCTGGGAGTGGCATCTTACCTTTGATCCCAACACTTGGGAGGCAGGCAGATGCAGGAGAATCTCTTTGAGTTTTGAGTTTGAGGCTATCCTGGTCTAAATAGCAAGTTCCAGGACAGCCAGCACTACATAAAAGGTCCTGTCTCAAACGAAGCAAACCAGCATCTTGTTTCCCCAAATGACAAGTGCATTAAATTATAGTTTTCTGGATTGGTTTTAAAGCTAGATCATTGGATTCAATGTATCTTAGTCCCCAAAATGATTAGTTTTCAAGAGAAAAACAAAAAATGGTTTTCCATTTCATTAATTCTAATCTTCCCAGAAGTAGGGCCTTTTGGGCTAGTGGACAAACTATTACTGGCCTTAAAAGAAGTGAGGACTGTGTCATAGGTTTGAGTCTTAAAGAGCTCTCTTTGAACCATAAGTCTCCCCAAAACAGCACAGAGTTGTTTTCAGTGCCCTGAATCTTTTGTTAAAATTCACTTTTAAAACAGTGTTAGCACACTCCTTTAATCCCAGCACTTAAGAGGCAGAGACAAGTAGATCTCTGAGTTCAAGGACAGCTTGGTCTACAGAATGAGTTCCAAGACAGCCAGGGCTACACAGAGAAACCGTGTCTCAAAAACAAACAAAAAAACAAAAAAATCCACTTTGTATTTTTCTCTTGAAAACTAATCATTTTGGGGACTAAGATACATTGAATCCAATGATCTAGCTTTAAAACCAATCCAGAAAACTATAATTTAATGCACTTGTCATTTGGGGAAACAAGATGCTGGTTTGCTTCGTTTGAGACAGGACCTTTATGCAGTGCTGGCTGTCCTGGAACTTGTTATTTAGGCCAGGATAGCCTCAAGAGTCACAAAACATATGGGTAGTCTCTACATAGTAAGGAAATTTGTTGACTTACAGTCTGTAGTCCAACTCCCAACAGTGGTCAGCAGCAGCTGTGAATGGAAGTTCAAGGGTCTAGCACTTGCTCAGTCCCACAAAGCAAGCAGGCAAAGAAGAAAGAATCTTCCTTCTGCCAACGTCCTTATGTGGTCACCAGCAGAAGGTGTGTCCCAGATTAAAGGTGTGTACCACCATGCCTGGATCTGGGACTTGCTTTGTCCCAGATGACCTTGAACTCAGAGGTATCCTTGCCTTCGTCCCCTGGGATTCATAGCCACTATGCCTCAAAATCTCCATGCCAAGATCCAGGTCAGAAACTTGTATCTCCCAGCCTCAAGATCAGGATCACAGATGATCCTTCCAATTCTGGATTGTAGTTCATTCCAGTTATAGTCAAGTTGGCAACCAGGAATAACCACTACATGTGGCCTTAGTACATGTGTGGATGTCAGAAGACAACTTTGTAGAGTCAGTTCTCTCCTTTCACTTTGAATTGAGTTCCAGGGATCAAACTCAGGTTGTCAGGCTTGACCTCTTGTCACGTTGTCCTCTCACCTTCAGTTGCACTCTCACCTTCAGTTGCACACATTGGTATGATACATATATACACAATAAATAAAATGTAATAAAGTCAACCTTTAAGACTTCAAAGAGGAAATTTGAGTATGATAAGTAGGGGTAAGGTAGAGATGCTATGGATGTACACAGGAACACTGCCATAGTCCCTGCACTAGAAAGATGCTCCGATAGTAGGCTAAGGAATAGACAGAGAAGCAATAGGTGGGCAAAGAAAGTGTATTCTGGTTGTGTGACTTGAGGACTTTCAAGGCAAGAAGGGTGTCATAGCTAAAAAGACAGGGCAGCAGGACTGATTTTTGTCTGGATGCTTTCACAGACTTTCCCATCCTTACCCCAAATCATGGAGTACTTGAGAGGGAAATTTTGACTCTAGGGAGCTATAACAAGAAATTATATCCCAACTTCAGGTATTCCTTAAAGGGAATGGAATGGATTCCTCCCTTCTGTCCCTTCTTTTTATGCTGCAGAAATTTTTGTTGAGGAGAAAACAAAGCCTCAAGAGAGTACAGCAGCTGGAATTTTGACATTCTTGAGACTAGAGTCATGCTTCTGTAAACTTCATCTATGGAAAGGGAATTGTCTTTTAAACTCCTAAATGGGAACTGGAGAAATGGCTTAGGGGTTAAAAGCAGTTACTGTTCTTTTAAAGAACCCAGGTTTGGTTACCAGCACCCACATGGTGATGCAGGACCATTTATAGCTCCATTTCTGGGGACCCAATTCCTCTTCATATCTCCTCAGGCTTCTGCACTCATACATACACTTGGGTGTACACTGGCTCTCCTGGACTCAATTTGTAGACCAGGCTGGCCTCAAACTCACAGAGATCCAACTGCCTGTGCCTCCTAAGTGGTGGAATTAAGGGCATATACTATCACCACTCAGCATGCATATATATTTTTTTCTTAAATGTTCATGTTTCAGTGAGCTTTCCAAAGATTACCATCACTGTGTTGACCTGTGGCCTCTCTGACATGTCCTCACTTGCATTCAACTCTGCTCTTGGCCTGCCCCAGCTTTGCTCCTGCTGCCTTCTTCCCTGTACCACTCTCCCTTTAGCTTCCCATTATTAGTCTGCATCATTGCCAATCAGAACTCCAGTCAAATATACGACCTCCCCCTCAATATCTCCCATTTCTGTTCATTTCACTCAGAATACATGACTGTGAAATTCCTTGGTTTTCTTGTATGTTGTCTGCCTCTGATATTAGAAGGTAAAATATCCCCAGACCTTCATGGTCTTGAATGTGATAGGCATGTCCAATAAATGATGAGGGGATCAATCTATGGGATGCTTGGCAGAGGGGACTTAAAACCTGCAGGGTATAACAATGCAATCTCTCTCTTCCTCATCTTGTTCTGGTGTCAGCTCCCCTGGAAGTCAGAGGGGTTACCACAGAGAACTGAAAGAAAAACGCATTCCAATTAGGTACACAGCCTCCTTTAAGGGTTCTTGTATATAAAATGCTTTTTGAAGAAGGGCAGGTGGGGATTTTATAAAGCATACCAAGGTGCAAAATACTTCCATGGCTCTTTGTATGGGAAGAAAATAAAGTTCCATGGCTTCTTTTAATGGAATTATTTCACTTCCTTTGTTCTAATGATTAAGCTCTTTAAAGCATGCAACAGATATTAAACAACATTTATTGAGATCAAGCAATGTATTTAGTTGCTAGCAACTTGGGCTCTGACTCCAGATTGTAGTGTTTGAATACCAGCCCTGCCTATTTCTAGCATTGTGACTGTGGACACACTTCCTAATTTCTCTTTACATCAGGTCTCTCTGTAAAATGAGAATAGAAGCAGCACACTGAATTGCTGTGATGTTTACAGTTCTATGTAAAGTACCTTGCAGAGTTTGCAGCCCATGGTAAATTCAAAGCAAATGTAGCTGTTGTGGTGGTGGTGGTTGTTGTTGTTACATAATGAATAGGACAAAGTTCCTGCTCTCCAGGAGTTATGCAGAAAAATCTAGAAAGAAAAAGATTCAAAATAACTGCAAAAGAGCAATAGATGGCTTGTTCTAGGCCCTGGGGAGAGAGTGCTCTGGAAAAATTTGGTAGTATATAGGTACCTCTTTTAGTAGGAGAAATGACAAGTAGAAAAGAAGCATTCTGAGTAGAAGGATCAGCCAAGACAAGCATAGGCTTGACAGTGAAGCAGGGTCTTGCTATATACCTTTGGCTGACATGGTATTCATTTTGTAGATCAGGCTGGTCCCAGACTTGTAACAGCCCTTCTACTTTAGCCTTCTGAGTGTCGGGATTACAAGTATGAGCATCATGCACTGGATAGAAATTTTCTGAATACATTATTCATAGCCAATCCTACATTACAACAAAATCAGAATCATGGGTTTGATGGGTCATTCCAATATACATTAAAGTAATGACAGCTGATAAATATCAGTATTGTGTATCTAAAATCACCTCCACAATCAAATTTTGAGATATCTGCATTAGGGACCTCTCTCAACTGAGGACCAGAGGGCAAAACATACTAGCAGCAAAATGTGCCAGTCTATTATAAAATATAATAAGTTTCATCATAGTACTCTGCTTATGCAGGCAGTACAACTTTTTTTTACTTTATTAGATATTTTCTTTATATTTCAATTGTTAACCCCTTTCATGGTCTCCCTCTGAAAACCTTCTCTCCTTATCCCCTCCTCCTCCCCCCCCCTGCTCACCAAACTACCCACTCCCACTTCCTGGCCCTGGCATTTCCCTGCACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTTTCCTCCCATTGATGATCAACTAGGCCATCCTCTGCTGCATATGTAGCTGGAGCCATGAGTCCCACCATGTATACTCTTTGGTTGGTGGTTTAGTCCCAGGGAGCTCTGGAGATACTGATTAGTTCATATTGTTGTTCCTCTTATGGGGCTGCAAACTCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAACCCTGTGCTCAGTCCAGTGGATGGCTGTGAGCATCCACTTCTGTATTTGCTAGGCACTGGCAGAGCCTCAAGAAGACACCTTCCTGTCACAATTCCTTCCATCACACTTGTGTTTTCTTTGAGCAAATATTTCAAGTAGTGTTGATCCAGAATAAATGCCATAGAACTTTGAAGATTCCTTAAGAATGTACTTCATGACCATTTTAGATTAAAGTTCTGATGTTTTTGGTTTTTTTTTGTTTTGTTTTGTTTTTCGAGACACGGTTTCTCTGTATAGCCCTGGCTATCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGGGTGTGCCACCACACCCGGCCTAAAATTCTGATTTCTGAACAGTGACTATTCCTTATGTTGCCTAAGGGGAGCTCCCAGCAGACTTCACTACAGTGTAAGATCAACTTTTGACCAACTATAAATAAGGATAAAGGCTGCCTGTGTTGCATTAATCCTGTGAAGAATGTTGGTTTGAAGCCACTTAAACCCTTGGATAAGAAGACCTTCAGGAAATGTCAACGTTAGTAAATGAGTTGCTTTCTAAGACCAAACAGAAAATTCCAAAAAGCACTTTAAAAAATTTTTTTACAGGTGACTAATTCAGTATTTGGATCTCAAGCTTTCTGTACCATAAGATATTCTCATGTTTTCAGGAAACACTTGTTGAATTCCTAGTATATAACCTTTGTAGGTGCTGATAATTCAGCAGTAAATAAGGTAGATGTAGTAACTGTCCCTGTAAAGACTAGAGCCTATTTGAGGGAAATAGGTATTAACAAACCAGAACTTGAGTGACGTATCCTATAAAGAACAACCATCAATTAGCTCATTCCTAACCCAATGTGTGCTTAAGGAGAGCCCAGGAAGTGTAAAGCGTTTTCTGATACATCTGTGTTTTCATGAGGAGCTAAAGGATGAATAGAGAGGTTGGTCAGGTTGAAAAAAAATCAAAAAAACAAAAAGCAAGATCAGGTCAGGTGTTGTGGCACGTGGCACATACCTTTAATCTCAGAACTTAGGAAGCAGAGGCAGGTAGGTCTCTGTGAATCTGATGCCAGCCTAGTCTACCTAAGACTCTTTTTTTTTTCTTTGTATTTTCTCTCAAGAGCTGTGTAGTGAGATCTTGTCTTAAAAAATAAAGTAAAATGAATATGAAAATTAGTGAAGAGGGAAAAATATGGGTGTGTACCCCAAAGACAAGAAGATAATAGTTTCCCCAGCAAAGAACTGAAAGAAACCCACTAGAAAAACAACAAACGATGCATTTTTCTCTCTTCTTGACTTTTCTTCCAAGACTTAGATGTAAAAGGCTATACATGTTTGTGTACAAAAGTCCTGGCAGTCTTTACGACTTGGATTTCTGAGTCTCCTGATGTTGGAGAATCACCGCCTATCTTCCTTTCTGGATTAGTTCTTCAAGATACACACTAATTAAAGTATTTTCAAAATAGTCTTATTAAGTGTCAATTGTTAGTACTCATTACGTTGAGTAACCTAATTGCAGGTATTGTGTGTCAAGTTATAGCTTATGATCAGAGTTCTTAAAGTAGTAAGAGCGAACCAATTAAAGCCGGGCTTTGAGAAATTTGCTGGGTTTTGAATATGACCTTTGCTTTCCTCTGCTGGTATCTGAAAGTCAAGGAGGTTTCATCTGTTGATGACAGGGAAGGGAAGCAGTCCTTAGTTGATGTCACTGCCCCTCACAGGAACTGACTCACATGTTTTCAGATGAAACCATAGAGTTTTAGGGAGAGCCTGAATCTCAGAAACCTGTTTCCTTACCAGGAAAAATAGCATTGTCTCATCTGGGTCTTTCTTGCCCACAGTGTTCTCACTTGGTTTTTATGAATGCCTTTTAAGCATTGTTTCTAGGAAGCATTGTGGATGTTGTTGTGTATAACTTTAATCCTTTAAGATTTGGATGGGGGAAGTAGTGCTTTCAAGCTTTTCTTCAAATGGTTAAAATTGCTTCACTCCTTATTGCTCAAGAAAAGTTACCAGGGTCAGGGGTAAATAAGAGGGGCAGTCAACTTCAAAGAAGAAACTCTATATAAGGTGACTTCCATGAAGAAATTTCTATATATGTATACAAACCCCTCCTATTCTTACCATTCTTTGGTAGATGGGGTTCTCATAAACTTAAGGACCATCCTAAGGCATTCCATCCGCAGGTAGGGAGTTGGAAATGGATTGTGTTCCTAAATAGCAGCCTTTGAAGAGCCTCCTTCCCAATCCTGATAAACCTGTTTAGAAAACAAAACCAAACCTCGGGATTCATGGATGTGTTCATGGATGTGCACCAGATCTGTCTTCCCAGCCTGTCCTCTTGTCTAGGGCAGCATATAGCTGTTATTCTAAAGCTGACTAAGAACTCTAAGGACTTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACGTACCCCCTTCTTGGTATTTTCTCTCAAGTTTCACACATAGAAATATATATTTAAAAGTAGACTGTAGTTTTCCACAAGTTATAAAATGTCCATCAACAAAGTAGACACGTGTAGCAGGATCTCCGTAGAGTGGATTGATCTGCAGCAGTGATGTCAGAACTAGAGCTCAGTGTGACAATGCGAATTGCAAATTCAATGGACACAAAACTACAACTTGTAGAACATGTATGAAGTTCTAAGCTTGTAAAACTGTTTTGTGTAACAAATGTAAAGGATTTATGTCAAATATAAACAGCAGTCATAATGGTGGCACCTTCAACCAAGGAAAAGACAATGTGCACAGTGGTATATGCCCTTAATCTTAACACCCTGGAAATAGAGGGAGGCAGTTCTTTGTGATTTCAAGGCCAGCCTGGTCTACATAGAGAACTCTAGGCCAGCCAAGGGTAACTAATGAGATACTGCCCGCCCCCAGGACGATTGCTTTGGAAGAGATCCAACAGGAGAATCAAGTATTTCCATAACTTGTCCTTCAAGCCTTATTATATGTAGCTATTATGTTATTTTCCATCTTTTTGTGTCTGAAATACTTTATTAAAATAAAAGTAACAAGAATCTACAGAAAAGACACTGCTTGAAGTTGTGTACTTTGGTCAGTTCTCATTTGGGCATACCCACTGGTAGTATTTCCTAAAAAAAGTCAGAAGAGTTAGACACTCTTCTAAAAAAGATCTTCACTTGTACCATTCTTATTGGTCAAGAAGGTAGTTTTGAGAAATGTTTTCTAAACTAAGAGAAATTACAACTTTTCAGCCTCTGGGTAAAGCTGAGTCTTGAGTCTGCTTCTATTTGATTTATATGGTAACCATGGTTTCAAAAATGTTAACTATCACTTTAAGATTTCATATTATAAAAGTGCCCCCCCCCCCCGACAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCATGCCCAGCTCCAATGCTACTGCTTTTAAAAGATGTATTTCGAGGTCACTGGAACTCATGATCTTCTTGCCTCAGCCTTCTGAGTGCTAGGATTAATAGACCTGTGCTACCAGGCCTGGCCCTCTTACCTAGTCTTAAACTATCAAAAAGGCTGGCATCTCCAGGCCCTCAAAATACACAGTCTACTGCTGGTGAGCACTGTGTAACAAATACTATCTACTTGGTTGGTAGAGATAAGAGAATCAAGCTAAAAGCCAGTCTGGTTTATATGAGACTCTATCCTCTAAAAACAAACAAAACAAGTTGTGGATCCCCCATGGCCACATAGTGAGACCCTGTCCCAATAAAACAAATCAAGTATGCCTTCTAGGCATTCAAGTCAGCCATGGACCTTTACTAGAATCAGAACTAAAATCATCATTTCTGAGGTATTCTGGTTGGTATGGTTTTTAAAAAATAATAAATGTAAGTTTGATCTTGCCATATTTGCAAAAGGGGACTCCTAGGAAACAGCAAATTACTGCCAGCTAAGGTCTGTGATTCTAGGACTCAGGAGGCTGAAGCAGGATGGATCATGAGCCAATTTGGGCTAAGCATGGCTTTCCCGACCAGACAGCACTAACTTCTAAGACTCTTGTCTTAAAAATCAAAAGGATGATAGCGGATAGAGGTGTTGCCTTTAATCCCAGCACTTGGGAGGCAGAGACACGTGGATCTCTGTGAGTTCAAGGCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGCCAAAGCTACACAGAGAAACCTTGTCTCAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAAATCAAGAGGGTGGGCTGGGTGGAGATGGCAAGTGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATCTCTGTGAGTTCAAGGCCTGCCTGGTCTATATAACTAGTTCCAGGATAGCCAAGGCTACAACAAGAGAAACCCTGACTTAAAAAAATTGAAGAAACAAAACAAAATGAGAAGATGGGAGGAGAAAGAGCAAAAGAGTTATCTCACTGATGTTTCTACTCTGCCCACAG
Seq C2 exon
ATCTGTTGAACAGGAGCAATCATTTCTAGACTAATTGAAAATCTTGATTCAAAAACTGTACATCTGCCTATCTGTCTACTGTCAAACTGCATTTTTAGTAAATTTTCTTCCTCTTACTCTGGTGGGTCTAAAGATGACAGCAGCAACCCGACAAGAAGTCCTCTGCCTCTACCGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCAGCATCAGGGCAGATGGAAGACACCATCGAAGAAAAACAGTACATACTAAAGGAAGCCAGAACACTGTTCCAGAAAAACAAAAAT
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000030922-Lyrm1:NM_029610:1
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0534710=Complex1_LYR=PU(68.7=86.8)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Conservation
Human
(hg38)
No conservation detected
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: