MmuINT0178963 @ mm10
Intron Retention
Gene
ENSMUSG00000046658 | Zfp316
Description
zinc finger protein 316 [Source:MGI Symbol;Acc:MGI:1860402]
Coordinates
chr5:143249697-143262906:-
Coord C1 exon
chr5:143262793-143262906
Coord A exon
chr5:143255566-143262792
Coord C2 exon
chr5:143249697-143255565
Length
7227 bp
Sequences
Splice sites
5' ss Seq
CGGGTGAGT
5' ss Score
9.89
3' ss Seq
TTTTCTCTTTTCACCCTCAGGAG
3' ss Score
10.98
Exon sequences
Seq C1 exon
GATACCCAATCCCTAAGCCAGATCTGATCTTCCACCTCGAACAAGGAGAAGAACCTTGGGTTGAAGATGGCCCCCATCCCGAGGAGGGAGATGTCGTCACTGGTGTCTACACGG
Seq A exon
GTGAGTGAGACACACACCTTGGGGGGGGGTTCTGCTAGCATCATTGCTCAGAGCTGTGCCCACCCAAGTTAGCCTTTACCAAGGAGAGTGCTCGGCAGACCTGTTCGTGGGTCTCTCTGCCTCCCTGATGCAGTTATGCTGATGTGTTGGCGTGTGGAGTGGCCTTGAGGAGGCAGGGAGGCTGCTGTGTGCTAGTCCCTGCTGTCAGCTCCCAAGTCCTCATGGCCCAGCTTCACAGAGGTCTAAGGGCTAGTGTATGTCCTTAGAGAACCTTAGGGGTCTGAGAGGGTTGGTTGGTTGGTTTGTGTTTTGCTTCTTCTTCCTTTATAAATGAGTGGCGTTGACAAACTGGCACAGAAACCTACCAAACTGTCAGAGTGTTTTCCACACTTGGACTACCCGGTTTTCTGGCTTGCCCACCTATTTGGCCATTTCTGCATAAGGTACCCCTCAATCTCTCCACTTCCTCTGAAACCATCCAGCATGGGTTTTCTGAGACCGAGCCCCACTCCTATTGAAGGCTCACCAACTGACGAGGCTGGCTGGCCCATGAACTCCAGGGATCTGCCTGTCTCTGTCCCTCCAGTGTGTGCCGCCATACTAGTGCCCTGCCTCCTGCCACCCCCACCCCTGCCCTGCCCTGGCTCAGGCTCTGCCTGTTCAACTCCCTAAGCTGTACATTGTTCATACGGAGAATAGTCTGAACTAAACCTGTAGATTCCAACCCGAGCATGCTGGCTCCTAGTCACATGGAATATGCCATGGGTTCTGCGAGCCTCATGAGGACGTTGGAGTAATAGAGACCCTTGTCTGAAAGGTGTCTCTCTGGGGACTAGGGTGTCATCAGCTGAGGGTGGAGTTATCATAGATGTATATTAAAACAAGAAGACGGGAAACCTCACTCTGGTAACATGCCTGTGAGTTCTCACACCAGCTGAGAGGCAGCGAGGAATCCAGCCTTCTTCCAGATGAAGCCCCAAAATAGGTAGTGTTCTTGAGGATCCAAGTGGGAGGTACATTCTATTCATGGATACGTCTAGAAAAACCACTTAGAGAGAGCGGGACAACACTGATCAGCCTCTTGAGTGTCGGTTGGAGGGGTGCCCTTGCGTGCCATTCCCTTGAGGGGTCCAGGGGAAGAGTCTGGCCCTTTTCAATGCAGGTGACACCAGGTCACAGGTGCCACATAGTTATGCACCTGAATGGGAATTGGACGCTCTTTAACTCTTTAATTGGAGGTTCTGGTTAACTGGGTCAGCACCTCTGCTATCCATGGCAAGCCATGGTGTTGGGGCTGGTGGCCTGAGATGTCTTTCAGCACAGCCCTGTCTGCAGAGTTATCAGTTGGCAAAGGATCCATGAACATTTTTTTTTTTTTTTTTTTTTGGTTTTTCCAGACAGGGTTTCTCTGTGTCACCCTAGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCACCCAGCAATGAACATCTTTTAAATAGTGGTTCCCAACTTTCCCAATGCTGCAACCCTCATGTTGTGGTGACCACAATCATAAAATTATTTCCGTTGCTACTTCATAACTATAATTCTGCTACTGTTATGAATCTGTGTTTTCCAGTGGTCATAAGCAACCCCTGTGAGACAGCTGTTTGACCCTCAAGGGTCATGACTCACAGGTTGAAAACCACTGTTGTAAAGCCTTTTTATCTCAAGCTTGGTGTGTGGGTGCCTTTAAGCCCAGCACTTGGTGTGTGTGTGCGTGCCTTTAAGCCCAGCACTCAAAGGCAAAGGCAGATGAATATGCTTGGGTTTGATGCCAGCCAGGGCTACAAAGTGACACCATGTCTCTAGAAAAAAGAAATCCTAATTGGGGTCAGAGGACAACCTTGGGCACCAGTCCTCAGCTTCCACCTCATTGGCAACAGGGTTTCTGTCCGATTCACCACTCACAGGACCTGCTAGCTGGCGGATGGGCTCTCTGGGATTCTCCTGTCTCTCCACAGGATTAGCGATTAGACTCAGTCACTGTGCCTGGCTTGTCATTGGCACTAGGGATTTGAACTCTGGTCCTCATGCTTGCATGGTGAACACTTTACTCATAGAGCCATCCCTCAGCCCCCAGGCATGTCTGATGTGTCACATGACTGCCCAGAAGGGATCCAGGCGTGATGGCAGGACCAGGGAGGAGCTCTGGCTTAGTGAAGCCTCAGGTCTTCTCAGGTCTTCTTCCCTCTGAGGACAGTGAGTGGCTCCTTGTCTGCCTCTCTTTTTCTCTCTTTATTGTCTCTGCCCAGCAGTGCCAGCTGGGAACTGAGACTGGCCGAGTCTGTCCCTAGGCTGGCTATCTGGGACTTCTAAATTAGTCTTGCGAGACAAGACTCTAATTTTCTTTCCTCTGTCCCTTGTGAGTTCAGCTGTACATGACGCGTGGGCACCTGGCCATGTTCCTTCTCTCAGGTGTTGCCACTTTGTATGTGATACTCAGAGTCCCACTGCCCTTCAGCCTGGTCTCTAGGCATCCCAGCATCCCTGGTCACCACCTTCAACCCTTCACTCCTACATCATCCACACAAGCTCATCCTCCTCACCCAGCTTCCCTCCCAGGGCCCTTGGTCCGTATGCCCACCCCACATGGTCCATCCCAGGGCCCTTGGTCAGTACGCACACCCCACATGGTCCATCCCAGGGCCCTTGGTCTGTATACGCACCCCACATGGTCCTGGAGAGACCCCCTGCTCTAGGCTCAACCATTTCCTGCCTCCAGTCTGACTGGAGAAGGCAGGTCCTGAGTGCTGCTGCCCTGGTTCTCTGTGTCTGCCTGGCCTTATGCCCTGAGACAGATCCTTGCTGCTTCCTTCCCTGGCACTCCAGAGGCTGTGTTGGCTGGAGCAGAACTGGCCCTGTAAGGGCAACCCCCATTCCCTCTGTTGAGGCTTCTGCCCACTTTCCTTTCTTGAATGTGCATGTGTGCAGGTGTGCGTGGAGGCCAGAAGTCAACACCGGGGCTGTCTGCCTTGTTGAGACCGGTTCTTGATGGGATCTGGGGCTTCATGACTAGGCTGGCTGGCCACTGAGCAGGAGGATTCTATCCATGTTCCATGGCCTCCCCTATTCAAGATCACAAGCGTGCTGGGAACTGAACTCGGGGGTTTGTACTTGTGTGGAGTGCCAGGACTTCCCATCTTCCCAGCCCATTTCAGGAAGTGAAGTATAGACAGGAAATACAACACTTAAGGCTGGACCAGTTTAAACAGTAAGACACAGTTACTACAGAAGCATCGAGAAGCCGGGTGGTGGTGGCGCAGGCCTTTAATCCCAGCACTCAGGGGCAGGGGCAGGGGCAGGGGCAGGTAGATTTCTGAGTTTGAAGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTTGAAAAACAAACAAACAAATAAACAAAAAAGCATTGAGAATCCAGAACTAGCAAGCAAGCCACAGCTGTGGTGGGGCGTGGGGCATGTCTGGAGCCCCTCATGTGACCCACACTGTCAGCCTGGGGACAGCTGGTATCCATCTGGGCAGACCCAGCAACTCTGTTAATAGTGCTCAGTTCAGCTAAGCAGAAATGAGCACAGGTTCGGGAGAGCCACAGAGGAGAGGTCTCTTGGCCAGGGGCAGTGCATGAACACCATGGCAGGCGGAGTCTGGCCACAGATAGGGTGACTGGAGAGCAACGGTTCTCATCCTGTGGGTGGAGACCTCTTCAGGGTCGAATATCAGATATCCTGTGCATCAGGTATTCACACTATGATTCATGACCACAGCAAAACTCCTCATGAAGTCACAATGAAATAATTTTATCAATGGGGGTCTCCACAACATGAGCAGCTGTAGTAAAGGGTCCTGACATTAGGGAGGTTGAGAACTGCTGCTGCAGAGGGTCTCTTGGTGGGGTTTCACCTAGCCGTGCCCTGGAGGGAACCTGGAGAGTAGAGTCCTCTAGTCCTAGCTGGGGGCCCAAGGGTCTGGAATCCTGTTGTCACCCAGGCCCCTAGGCTGGGTGCAGAGGGAGGGAAGAGCCGAGGGGACTTCTGGCAGAGAGGCTGGCTTAGCACCTAGAACAAAGGGGCGGACAGGTGTCCAGGTGCTGGACGGATGCTCTGATGGGATGAGGGAATGCTTATTCTGCCCAAATCCTTGGGACAAAAGTTATCCAGGAGCAGACCCAGCTCCAGTTAACACTAGGGCCTAGGTCCAAAGAATGGCTGATCTTTTAGAGGCTGCTCACCAGCAGTGGGAGGGCAACCCAGTGCCCATCCCCAGAGAAGGGCTGCCTGCTCCAGACCCATTAGCTTGTCCACAGCTTGGCTTGAAGGGCAGATGTCAGTTAGAGGAGCCGGCTGCCTTCCCAGGCTGTAGTTCAGATGCCTCCCAGGGAGCCCGCAGTGAGGCTGCCAGTTTCTATAGACTTCCACACCATTTGGGTATGCCTCCTCCCTTGGGGACTGTCCCCAATAAGGGAAGGAACTTTCTCTGAGCTCATCTCCAACTGGAGTTGGGGGCAGGTGGCATGAGGCAGGTACAGATCTTATTTGGGGACATCAGGATAACATTGTTAATGGAAGGAAAATGGCAACTTGACTGGGGACCTCTGTGCCTGCAATACCTTGTCAGCATCAATGGTTCTCTACAACTGATATCAGGCTGCCTCCAAGACCACCAGTACCACACCCTATAGCTTTGGAAGGGACTGGTCGCTCAGGGTCCCTGGGGTAAAGGGCCCAGCCTGGCCCATGCAGTCCTCCGAAAATGCAGGAGACTGGAGGCATGTGCCATGGGACGGCCCCTGGGGTGCAGTTCAGTGGAATAAAGCAGTTTGGGGCTTGTAAATCCCCAAACCTGTAAGGCTCATACCGCCAGCCACTATAACAAAGAGGCTGTGACCCAGTGATATTTGCAGAGATGGGGGAGACTGGTAAGAGCCCTCAGTCCTGAGGGCCTCAACTCACTACCTTGGCCCTGGGCTTGTGTTCCCCTCCACTGGCTCCTCTTTTCCCTTACCTTGTGGCCATGCTGTGTAATTTGGCTAGACAGTGGGCTGTGAGCCCCTGTGTCTTCCTGAAGGCCTGCTTCATCACCCTTCACCTACGGTCAGATCCTTGGAGCAAATGTTAGGTGGAGGCAGCCCCACCCCCACTTTACTACTCTGTGGATCTGGGTTTGGCCCTCAAGGTCACCCTGCTGCCCTCCCCACTGCCTTCCAACTAGTCTCATAGCAGGCATGTGTATCCTCACCTGAGGCTTACAGAGACCGGCTCTGTGTGATGTCTGCTCCTGGAGTGGCTGTTACTGGAGATGGCTCTGAGCACACTCTGAAGCAGGAAATGGGGGATCAAAGCTGGTCTCTCTTGGGGTTCCCCTGTCCCAGAAGCCCAGTAGCTTCCTGAGGTATCAGCTTGGGGTAGAGCCAACTCTGACTTCTCCAGGGCTAAGGGGTGGCCTCTACACATCACTGAGCGCAGTGTAGGCCTCATGCTTGCTCTGCGGTGGTCACTGCAGGCCTCTCTCAGGACTGTCCACCCTACAGAGCTGTGTGTAGTGGAGCAGGGTGCAGGGGCTCACCATTCCCAGACTCTGGAGAAGTCCCTGCCCACCCTCTCAGCTCTTGCCAGAACGAGGTTCCTGGAGCATTGCAGACTGGCTCAGAAATCCAGGGATTGTATCTGTTCCTCTGCATTGGCTTCCCTGCCCTACTTGGCTCTGTTAAAAACTAAAGCCTCTCACCACAGCCTAGGGAAGGCCTTCTGATCCGACTGCCAGCTGAGCTTGGCTGTCCTGTGGCCAGCTTCTCCCTGCCCCATGACTGCTCCTGCCTTCCCAGGTTTGGGACGTTGTGGCTGAACAGAGAAGGACATCCAGCCAGCAACAGGGGCTCTCCCTGCCAGTCATGGACACAGGGCCGGACACTTTTCATTACTCTGGTGGCCATATTGGCAGCTGGAGGTAAACTCGGTTTTACAGATATTTCAATTAAAGTCTAAAGTGTGTGTTACCATAACAGTGTTGTTGCAGAACCCATTTCCTTGCCATATGGACAGCGTGCTTAAGTCCTCGCAGCTCTCAGTGGCTTCATGTGTGTGGTACTGGGAATGACAGCTAGAATGCACAACCAGGGCTAATGATGGGGTACTTGACATTAGAAGCCAGCCCTGGTTTTGAGACTTCTTGGCCCAGTCTCTGGCTTCTGTGGTCCCAGCTCACCCAGGCCAGTGGCAGTCTAAATGGGCCAGACCTTTGCCCTCAGAATTAAGTGGGTAGTTGGCTTTTTCTGCCCTACCTGCAAGAGCTCCACCCTTTCAGTTGCTGACATCTGAGGTGGATATGATGAACGGGGTGTGTGTGTGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACGAGAGAGGTGCTCTGAACACCTCAAAGTGCTGTGTCTCCTGAGTGCGTTGTCAACAGGTTCATTTCATGATCGAGGTGACCCTACAGACCTGATTCTAGAGCCCACAGTTCTCAGGAAGGGCAGTAGGGTGCGTTAGGCTGTGCATCTCAGTGGGAATCACAATACACGCACCCTCGAAGCTGCCCCTGAGTTTCACAAATGGAGAGTTCAGGAAAATGAAGCCTAGGGGTGACCTGTAACAGGGAGGAACTCATGAACCCACATGCACACCTCCTGGGGACTCTTTAAGGTGAGCGCCCACATGGTTCTCCCTGGCTAGCCATTTGTGTTTCTGCTGTAGAAGGGAGCTAACTTGCTAGCCACTGGTAAAGACAAGTAGAGGAGAAATGCTGAAGGTGGGCTTTACAGAGGGCGTCCTCCAGGCTGTGTGCCATGTCTGAGGGCTGCAGGTTTCCCCTCCAGTGCTTTTCCTGCACACAGGAACCTGCTGATAAACTACCTACTGTGCAGTCTCCTATCCTCCACAGACTGAAAGGCCTAAAGGAACCTTTCCTGGTCTTTCCTGGCCTCCATGAAGTTCCTAACTGGTGGGAGGCCAGCAGCTTTCCTGCTGTGGAGCTGCCCAGTGTTGGCTGTGGCATGCACCACACCTGAGTCTGTTCTAACGATTTCAGGATCTGGCTGCCATGTAGGCCTGTTTCCCTGCCATCACCCTTTTCTCTTTTCACCCTCAG
Seq C2 exon
GAGCCTGGTTCTGGAACGATGACATAGAGGACCACGAGGAGGAAGATGACGAGGACTTCCTTGCTGAGGTGGCTGAGGAGGAGAATGAGCCCCCGGGGCTATGGTCTGCTGCCTATGGAGTGGGGGATGTGCCTGGGACTTGGGGCCCCGACGACTCGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGTCTGGCCGGGAGCCTGGGGAGAACTTTCTGGTGCCCTGGGCATTTCCCGCAGTGGCTGTCCCCATCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCGCACCGTTCCCGCCTGGCCAAGCACCAGCGCTACCACGCAGCGGTCAAGCCCTTCGGCTGCGACGAGTGCGGCAAGGGCTTTGTGTACCGCTCGCACCTGGCCATCCACCAGCGCACCCATACCGGCGAGAAGCCCTTCCCGTGCCCGGACTGCGGCAAGCGCTTCGTCTACAAGTCGCACCTGGTCACGCACCGGCGCATCCACACGGGCGAGCGGCCCTACCGCTGCGTCTTCTGCGGCGCGGGCTTCGGGCGGCGCTCCTACTTGGTGACCCATCAGCGCACGCACACCGGCGAGAGGCCCTACCCATGTCTACACTGCGGCCGTAGCTTCAGCCAGAGCTCAGCGCTCGCCCGCCACCAGGCTGTGCACACCGCTGATCGTCCTCACTGCTGTCCGGACTGCGGCCAGGCCTTCCGCCTGCGCGCCGACTTCCAGCGTCACCGGCGCAGTGGCGGCTGCACGGAACCCAGCAGTGGCGATGGCGCGCGGATGGCTCCCCACGAGGTGGGGATGGCTCCCAATGAGGTGGAGATGGCAGTCGCGGCTGTAGCCACGGTGGAACCTGAGGAACTGGAGGCCGCGCCCGCAGAGACTGAAGAGCCCGAGGCTGGTGTGGCAGATGGAGACACCGAGGCTGAAGCCAGACAGGACGAGCAGGTGGTGGTCGCTCCGGCGGCAGAAGCGACTGTCCCCGACAGCAAGAAGGACCCTGAACCAGACAGACGGTTTCGTGAGATGGGCAACGGCCTGGCTGAGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCCCATTCTGGGGTTTCCCGAGTTCTCTGAACGGCTGCAAGCCGATGGACGCCATCTGCCCGGTCCCCTGGGCTCCCCGCTTTCCCTGCAAGGCATGGGGTTGGCTTGCGACCCGTTCCGCAGCGTGGGCCCCGGCGCCGGCGTGGATGGTGGCCTGCGAGCATTCCCGCCCGCTGTCCGCTCCTTGCTGTCGGAGCCCGCGCCTGCGGCGCTGGCGGAGGAGGAGAGCCCGTGGATCTGCTCCGACTGCGGCAAGACGTTCGGGCGGCGCGCGGCGCTGGCCAAGCACCAGCGCTACCACGCGGGTGAGCGGCCGCACCGCTGCGCCGACTGCGGCAAGAGCTTCGTGTACGGCTCGCACCTGGCGCGCCACCGGCGCACGCACACGGGCGAGCGGCCCTTCCCGTGCCCGGAATGCGGCGCTCGCTTCGCCCGCGGCTCGCACCTAGCGGCGCACGTGCGCGGCCACACCGGCGAGAAACCGTTCGTGTGCGGCGTGTGCGGGGCAGGCTTCAGCCGGCGCGCGCACCTCACGGCGCACGGGCGCGCGCACACGGGCGAGCGGCCCTACGCGTGCGCCGAGTGCGGCCGGCGCTTCGGCCAGAGCGCCGCGCTCACGCGGCACCAGTGGGCACACGCCGAGGAGAAGCCGCACCGCTGCCCGGACTGCGGCAAGGGCTTCGGCCACAGCTCGGACTTCAAGCGACACCGACGCACACACACGGGCGAGAAGCCGTTCCGTTGCGCTGACTGCGGCCGCGGGTTCGCACAGCGCTCCAACCTCGCCAAGCACCGGCGCGGCCACACGGGCGAGCGGCCCTTCCCCTGCCCCGAGTGCGGCAAGCGTTTCTCTCAGCGATCGGTGCTCGTGACGCACCAGCGCACGCACACGGGGGAGCGGCCGTACCTGTGCTCCAACTGCGGCCGGCGCTTCTCGCAGAGCTCGCACCTCCTCACGCACATGAAGACGCACCGCGGGCCGGGGAGCGCGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCTGCCCCCACCGGGCTCGGGCTCCGGAACGCTGCTCGAGTTCGCGGGAGGAACCAGCTTCGGCTCCGATCCTGCCGCGTTCGCCGGGCCCTCCGGCAGCTACGAGGAGAGCATCCTGTGAGGTCTATCGAAGCTCGGCGTGTCCTCCAGCTCTTTGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGGGTCTCTCCCGCCCCAAGCTTCAGATTTCGCTTGGGTGCGCACGGGCCGCCACCCTGACCAAGACCGACCCGTCCCTCGATCTGTGGTGCAGGGGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTGCCCTAGAGCCCCGCTGCTTAGGAGTCTGTCACCGGGCTCTCTGGTGCATTTGGGTTTCTTGGTGGGTTTGGCCTCTACTCATTCTCCTTGGGAGATTTGGGGACCGTCTTCCTGTCACTTGAGTGAGTCCAGTAAGTGTTCAGAACCTAGTTCAAGGCAGGCAGGAACCTCAGTAGGTTTTGGGGAAGATAGAGGTATGAACGGGGTAAGTTTTTGTTCTGTCGCCTGTAGGTATTTATTCCCATCGCTTATATGACCCGAAGAGTGTGGGAGGAGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGATATTGTCCAGGACCCTGGGGAGTTGGAAGCCTTATTCTTTGGAAATCCTCACTCCAACCTCTAAACAGGTCTGGCAAGCGCTGGCCACCACATGGACTTTGGTATTGCTATCCTCTCTCAGTTTGTTCTCTAGTGGCTGTAAGTAGCACACGTGGACATCTTTGGGGTGCCTGGTGTGGGCTCCTACAGACACAGTTCTCACTTTCATTTCCTAGCAGATCCCTCCCCTGGAGCAGGTGGCTGTGGAGCCCTGTGCTCAGCCAGCCTTTCCACAGCACTGGGGTGGGTCCGGGAATCTTCCCGCTCGTCCTGTAAAAAGGGCCCAACATCCTCTGCAAGCCTCTTCACACAGCCTCTGTAATCACCCTACACTAGGAGCAGGCAGTGTTTCTGCCGTGGGTGGGTGGGTCTCCACATAAAGGACCCCCGTGGAGCTGAGCTCACAGCGCCTTACTATGCAAGGCCCCTTACAGTGGACAGCTAACTTTCCAGCCCTGACTGTTGGCACCTGTGGTGTGGCTCACAGGAGCCCCTCCCACCCTCCATGAATTCTGGGCCAGTGTGACTGGGGACTAGAGAAGTGAGATTTCCACCCAACTGCATTCCCTTTTAGACCTAGATCCTTTCTTGTAGTATAGACATGACCTTGGGGCCCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGGGTGGGAAGAGAGCCTGGGTGGTGATGGTCAGAACTTAGCCTGACCTGTGCTGTCGAGTGGGGAGGAAGACATGGGTCCTCATTGTTCAGCAGTGGATATCTGTCCCTCTTAATCTTCTCTGGACATGAGCTTCAGATCGAGCCAGGGCAGGGTGGTCCGGGAGGGTGCCACCCATCCCTCATAGTCTCCAGTGTTTCCACCCTGTCCCCTCCGCTGTGGTCAGGAGGACCTAGCTTTAATAAAGACGGAGAAACAAGCTTGGGGACTGGACTCTATTTTTGCCCCACCTTGGTGCCTATTAGCGACACTCACTCTGGAAGGCCCATCTCCTTTCTGACATTTCCCCCTTTGAGAAACCAGAATCGATTCTGGCATCATGGATTGGGCCTGTGTCCACCACATCTTACTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTGTGACTAGCTAACCTTCCAGGTTCAGAGAGAGGGCCTAGTCTCCTTTATGGGAGTGCAGACCCCTGGCCTGGCCTGCCCTTTTCTCAGGGACTCCAATGCTCAGTGGCTTGCCTACTCCAGCTCCACGGAGGCGTGACCACCACCAGAGTTCCCAAACAACCCCCTTTAAACTGGCTTTTCTTAGTCTTCCAGCTGATCTTTTCCCGATGGGTTTGAAAGAAATATGCAAATGTGATTTGAGACATGGGGATAAAGGAGACTGGCATCTCCATTAAAACAACGAACAGGCCGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCATCCCCAGAACTCCATGGTGACACACACACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCTTTTCAACTCCCTGGGTTTGAGGCCAGCCTTGGCTACATAGAGACCCTACCTCAAAAATAACCCAGACTTTCAGAAGGCAGATGCTTATTAAGATATAAAGATGGGTGACCACAGCCGGGCGTGGTGGCGCACGCCTTTAATCCTAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGAAAAAGAAAAAGGAAAAAAAAAAATGGGTGACCACAGATCTTAGTGTACTGAAAGGCCAAGTAATCCGGTGATAAAGGTCACCATTGACTGCAGCTGGAGTTTTTCTGTGTTGTGTCAATCCTATGATTAGGGGAAAAAATTCTCTTCATTACCAAGGAGGGAGGAGCCCCAGTGACCTGTGAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTCCCTCAGCCTCCATTCTCATCCCAATGACCCTGTTTTCTCAGCCTTTGTATTTTTTTTCACTTGTCTCTTTAGACACTGCCTTCTCTCTCTCTCCTCTACTTATTTACTAGTTTTAGATTCAAATAAAAGTTTCTCTTCCTTGTTCATCATTTCCCCTCAGGTTATAAGTTAGATATGAATTGTAAGAACTCCAGCGGTGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTCTTCTGGAGTGTCAGAAAACAGCTACAGTGTACTCACATAAATAAATCTTAAAGAAACAAAACCCAAGGAGCTCCAGCAGTATGAGACATCAAGTTCACCTTCATCCCCCTGACAAAACTCATTCTACCCAGTACCCAGGATCCTGGGCACACGCACATCTATATGGAAATGGTTCAGGTTAACGACGTGCTTTAGATACTGTGCGACAACTGGCTTTTCCCCACCATGCCTACATCCTCATACTTTGGGAAGCAACAGTTGGAGGATCTCAAGTTCTAAACGAAGTCTCAACAACAGTGGGCAGCAGAGAGGGCTCAGCAGTCAACAACACTGGCTGCTCTTCCAGGGGAACTGATGGCAGCTCACAAGACTCTGGTCCCAGGGGACCTGACATCCTTTTTTGGCCTATGAAGACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGAAATGGAAGCAACAGAACAAGTTATGCTAAATTACTTCATCCGTGTTCCTATCTACTTCCCCCAGTTCAGACGTATTTCTCATTTCACCTGTTACAATTATAACATGTGTCTCTTGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000046658:ENSMUST00000161448:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.538 A=NA C2=0.418
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF0009621=zf-C2H2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types