MmuINT0179536 @ mm10
Intron Retention
Gene
ENSMUSG00000023284 | Zfp605
Description
zinc finger protein 605 [Source:MGI Symbol;Acc:MGI:2444933]
Coordinates
chr5:110111897-110123880:+
Coord C1 exon
chr5:110111897-110112066
Coord A exon
chr5:110112067-110123759
Coord C2 exon
chr5:110123760-110123880
Length
11693 bp
Sequences
Splice sites
5' ss Seq
AGGGTGAGT
5' ss Score
9.25
3' ss Seq
TCAGAGATTGTGTTTTTCAGATA
3' ss Score
6.15
Exon sequences
Seq C1 exon
GCCACGTCTCTCAGGAGTGAAACAGTTCCTGTGAAACAAACAAGAGGTGGACTCAAGTGTGAGAACATGTTCTTAGGTTCCACATATCATATCGCTCTCTGGAATCAGGACAGAAAAAAGTCATGACATCTTGAGTTCCTTAAATATAGCGGAAGATGACAGAATCAAGG
Seq A exon
GTGAGTTGTTTGCTTATATCCTACCACATGGGTTTTTTCTACTCTGCTTAGAGGTATGAGATTTACATGAATCTGCAACAAGAAAGGTCTTAAGTTTAGACTCTGAATAGATTTGAATTATAATAAGAGAAAATACAAAACTTTCTAATAGCTATTGAAATGGATGGTCTAGGGAACAAATTCCCAAATAGCCACCCTGCGATTACTATATTTCTTGAGACTGGTTTGTATAGAATTCCTTGATATAAGTTTCAAACATGAATGTAAAGAATTTGGACCACTATTTTAGAAACTAAGACAGGAGTCTTTTTTTTTTTTTTTTTACTTTTATTTATTTTATGTATATGTGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCACCAGCCCGGCAGGAGTCTTAAATACACATTAGTTTAGATTATGGTTTTAGGAATGAGAAGTCAGTCATGTAGCAGGGTGGTCATTATAGCCCTTCACCTAATACTCATAAATAGATGGGCTGACCAAGATGAGCTTTAGGTGCCAAGTGGTTAGTTAAAGTTAAAGCAATAAACCGCAAAGAACAATGCATTGGTCTTGTATCACTTTTGCAATGGGATAAAGAAGAACCCAAAACCCAAGAAGTACCTCCCAACCTCCCTTGAAAATGGTCTGACCATTAGCACAAATGAGGGGCTATCTCACTACTTACCGCTGAAGGAGTTCTGAATAGAATGTCTCTTGAGTTTTGTAGACCTGAGGTATGGAGTGAGAACTACAGAAGGGAAGGAATGGAGAAGTACTGGGTCCGGAGTCAGAATGCAGACAAGTGTCCTCTACAGGTCTGGATAGAAACACCCCAAGACCTCCGAGAAACCATCTGTGCTAGGAATGCAGGAAGGCATGCAACCATGACGTTGAGATGGGCATGGTTGATACACGTTGTCCCTGCATTCAGAAAGCAGGAAGAGCAAGAGTTCCTGAGTCTCATTCAAGTCATGCTTGAATGAGTCTTAGTGGCTGCCTTGCTAGGAAAAGACTGCTCAACCCACTGGAGAGCCAGGCAGCTTCCAAGTTCTTTCCCCTAGCACCAGTTTCTGACTCCAGAATGTGGCCAGCAAGCTGGAGTGATTTGAAGGTCTTTAGGCTGGAAGAGCATCAGTAAGGTGAGACTATCCACAGAACTTAGTCCCAGATGGAAGATGGGAATTTACAGTGTAAGAACAGGTATGCAGTTACACTAACGGGGATCCTGCCCTGGAGTTCTTAATCTAGTCTAGGTCATTTGCTTCATACGGATTTTATTTGTCTCTTTTTGTTTTGTTTCAGAGAGGGTCTTCTTTAGACCAAAGACCATTACCACTTTCTTTAGTAAAAGGATAATCCTTGTATCTTCATTTAGCCTTAATCCCTGAGTCATTCTGTTTTGAGAGCATACTTGAAAGGCTAGGTTAAGAGAATCAAAAGTTTGAGGCTAGCATGGGTTACATTATGAGCTCCTGCCAACCTGGGTTACATAGTAAGATTCTGTTTCACAATGGAGAGGAGAGAAAACAAAAATGATGGTGTTTTGTTTCGTTTTGTTTTGTTTTGTTTTACAAAATATACCTGAGAATTTAGCCCTTACTCTCACATGAAATCCACCTACTCGACTGGAAGTGGGACTTCATGCCTTTAATCTCAGCAGAGGCAGACTGAACTCTGAGTTCAAGATCACCTTGGTCTATAGACCTAGTTCCAGGACAGGCAAGGCTACACAGAGAAACCCTGTCTTGAAAAACCAAAGGAGGAGGAGGAACAGGAGGAGAAGGAGAAAGAAAAAAAGAAAACAAGAAAAGAGAAAGAGAATGGGTCTCTGTAGAAGTTATGGCTGGTTCTTCCTCCTAGCCCCATGTTCTCAGAAATAAAACTGAGGCTCAAAATATATTTACAAATATCTTGGCTATATAGATAGGCTCTACTCTGATTAGATCAAAACTTAGATAACACACTTATTTTAACTTACATTCTGCCATGTGGCTAGTTACCTATGCGCAGGTACCATGTATTTGTCTGTCTCCTTACACCTTCCCAGTGACTCTCCCTGCTCCTGGCTCTCTTCTAGAATCCTTTCTCTCTCTCAGTTGTCCCACCTCTATGTCCTGCCTAAGCCATAAGCCATAGGCTTTTTATTTTGTTTTTTGGTTTTTTTTTTTTTGGTGTTTTTGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGCCACCACGCCCGGCTACCATAGGCTTTTTAATAGACAGGCAATGCATCCATAAAATGCACAAGATATTCTCTACAATTCCCTTTTTAGTCATTTAAAAGGCTTCTTTCAAATATAAATTGAATAAAATTATAACAATTATAAAACAATTATGAAAACTATGAGATATGATGTACATTTACAATGTCCAGTCCATAGTATTTGGCAACTTTAGAAAATATTCTATTATCTATCGTATTTTGGTATGTTCAAAGTTTTGTACTTAATTCAATTTCTATCCTAATTTGCATTTTCATTCTAAAAACATCGTCTTAGACCTAGAACATCTTCTCAAATCTTACAATGTAAACTTTCAGCAAGACTTTGACTGAAAACTCTTCAACCCCATCAGAGATCTGAAAAGGAATATTACCTGAGTATTCGGGAAGCTTAGGGATGCGGCTTCCAAAAATTACAGAAATGACAGAGACAACTGATTGCCTGGACAGTCCCCAATATTGTCTCTGCAATGTTAGAGCAACTGTCTTCAGCCTTTTGGCCCAGAATATGACACACTTTTTCTGAAGCAGGACTTATGAAGGACTTGCTTGCCTTGTCTTGGTAGAGCTTGGCAGTCTACTTTCCTGTGTCTGCTTGTCCTTTCTGGACAGCATGTCTGTAATTAAAGCATGGGCATTTTCCTTGCCAGTGCCTAGTTTGCCACAATTGAAGCAACTCCCTATGGAGTTATTGATGCTTATCATCTTTTTTGAAGTGGAATGGGGATATTGTCAGGAACAGACTTGTCTCATAGTCAAAAGATCTTTTGTTGTTGGAATTCCCAACCCTATTAAGCCTGTACAAAAAAAAAAACCCATACAATCCAGATATTACAAGTTATATGCCTAGATTGGGCAGATCTAACACTATACTAACTTGTTCCCCAGCTACAAGACCCTTTGCTACTTGTGGTTTCTCCTGGCTATGTGGCTCTGGTCAATCATGGCTTCTTCTTTTCCTCTATCCTCACTTCTCCACTCACCTTCCTCCTTTCCTCCTGCCTACCTACCACCCTCGAACCGCCTGTTCCACCTTTTCCCTCTATTGCCTAATCATAGGCTCTAGTCTGTTATTGACTAGTGGAAATGGGGAGAAGGTTCACATGAGATCACCTGAGTCCTCGATGGACTGCTTATTGGGGGCAACCCCTCTTGAGGAAGAGGTATTAACACCAGAATACAGACAGCATCAGACCAACTCACTACATCTTTTAATAATGAAATAATTTTAAATGCCATATTCTGTGGATCTCTGAGGTTTTTGAAGACTATCTTCTATCTATTTGACCAAGCAACAGGGTGTATAGTTTGGGAACAATTGAGACTACAATCTAATATGACCATGGGGTGGATTGATTGACTATTAATTTGCATTACTTAATTATCTTAAAGTTTGTAATAGCAGGTATTGAAAGGACTGGGACTAAACCTTGTATTATTAAATGAGTTGCATAGCCATAATACCTATATAATAGTTGAAACATACAAATATTATTTTGTAACAAATTAATCTTAAATTTTATATCAATATACAAAGATTTATACCAATGAAAACCTTGAACCTGTATCAGTATACAAAATTTTGTACCAATTTAACAAAATATAACCTCATTTCTGTATCAAAACATAAAGATCTCTCCCAATGTAAGATTGTGGCTATAAAATGTATTTTGATTTACGAGTAGATGCAACAATATATACCTATTTGTCTAATTTCTTATAATATTTCAATATCCCCTACCCATTCTTCTTTTCAATCCTCTTCCCTTGACCTAAGGAAGAAAGAAAAAGGAAAGAGAAAAGAAATCCCTGAATCTAGTGCATTTTCTCCCTATCCAAGACCATAACTAATTGTAAATCATCCCATAAAATGACCACATATGTATAATTTATAGAATAACCCAAACCATCCACCCCAATTTAAGGGACTGGGACAATGGTCTTTTTAGAATTGCTTCCTACTGAGTTGGGGTGAAGAATTCCTGTTTGGGAGACTAAGAAAATTAGAAAAATGGCTAGTCTTAAGAAAGCTAGCTGTAGGGTTTGTTGTCGAGTCTGTACGTTAAGAAAATGCAGGCTTAAATGAAGTCCTGACTGGATCAGTTGGACCAAGCAAAGTCATCTGGGATCAGCAGCCTTTCCTGAAGCTGTTCTGGAAGCAGGTCTCTCGAGGAACTGTAGGAAACAGGCATTCCAGCATCCTCAAGGGCTGCTGTTTTGGCCTCCCATTCTGCAATATATAAGTCTATAAGGACATTTGTATGGAATGTGCAAGGTGTACTGATCAGTTACTGCTCTTTGTTTGAGCAGGTGAAAGACAACTGTCTTTTTTTGGAAGTTAGTGTGATCATATAATCAAACTATAATATAAGTCTCCACTCATAACTTTTGAAAGATGGCATGTCATAATAAGTCATGAGAATTCTGTAGCCAACAATATCTATTGGCCATGTAAGTGGAAGTTCTGGCTGGAGAAGTATATGTCCCAGCCAGGTTCAGAGTTGTTAGAATAGAGGGTTTAGCAATATACTTCACCAGTGCTTTTGGCCCTTTTGACTTTCTCCTGTCTAAGCTGAGCTCTTCAGGGGGGTCTCCCGCTACCAAATCTGATCCTTTTTACTTTTGGAAGAAGTCAAAGCCTTTCCTTCTTTCCTGTTAACACAAATTCAGGGCTTCTCTTCCAGCATAGCATCTCCGTTGTCTGGCAGTCTGAAGTCATTGAAAGTCTAGACTGATCCACATTAGCAGCCCCTCTCCTACCTAGGTCTGTTTTATTTTGACCTCTCAGAGAGGGTGTGTAATGCCATCATAACCACTGAACTTATAACCACCTTCATCTTGATAACTAAAAACAATGAAAGCAATCGAGGAAACAATTACTGTTTATTGAGACAGGGTTTCTCTGTGTAACCTGAGCTGTTCTTGGATTTGTTTTGTAGATTAGGCTGGCTGTGAACTCACAAGGAACCTTTCTGTCCCTGCCTTTGTCTCCCGAATGAATTGAGATCAAAGGCTTGGATTTATTGATTTATTTATTATGAGCATAGCTTTTCTTTTTCTATTGGATAAAAGCAAAACAACTCTACCCAACCCCAACTCTGAGTCCCCACATTGACCAGCAAAATATCTTTCCTAGGACAAAATGCTTTTTGGCAACAGAAAAGCATTATCTGTCTATTTGAATTTTTTTTTTACTTTATTAAAATACTGAGTTTATTTCACATGTATATTTGTCTCCCTACCATTTCCACATCTGACCACCACTATTACTATGTCCTATCATAACATTCCATACATACTTAAAACCAAGTAAAGGGTGGAGTTCCATCCTTGAAAACTAAACAGGCATTTTAGACAACACATTCTTGGCAATTGAACCTGGACAACATTTATCAAACACAGTAGGGAAAGTTCTCACTTTGCATTATAAAAAGGACAGCCAGATATCAACTATTACAGAAATGAAGTAAGACAGAATATTTCAAACTGTTTAAACCCTTTTCTTAAAGAGACTTTCTCCACTGCCAGAGATCTTGAATAGCCTCCTGGTCAGTCATCCGGAAACAATTCTTCACATAATTGATGAACTTGGCTTCCACTTTGGGAAGAAAACTTGCTTGCATTTTTGCCTTAATGTCTTCTACAGAACTAGGTCCTTTCGGTGTTTTAGGAGTCTTTTCCTGTTTTTTGAAGGACTCTTGACCCTTTGATCTTGGTGTTGATGGTTTTAAGTCTTTTCCATTGGGTTTGATTTTTGTGCATTTTTGGCTGGGGTATCTCGTAATGATTTCTTCACTGGGACCTTTTCTTCAGTTTCCTCTTCATCAAAATCATCTTCCTCCTCCTCATCATCTTCATCAAGTTTTACTTTTTTCTGTGGAACCTTGTCACCACCTCCAGGAGCAGATCGCTTTCCAGACATGGCTAAGAGTTTTACGTCCTCCTCATCTTCATCTTCAGACTCTGCATCTTCCTCTACAGCTACTAGATGCTGTCCACTAATGTGCACAGGTCCTGAACCACACTTCAACCGTAAGACCACAGGTGGTGTAATTTCAAAGCCCCCAAGGGAAACTGTTGGTTGTACAGACATTTTCAAAGTTGCCAGTGTTACTTTAATTGGACTGCCTTATAGTCCATTGCTTCTGCCTCTACGATGTGTAACTCATCTTTTGCCCCTGCTCCTAAACTGACCGTTCTTAATGACAACTGGTGCTCATTTTCATCATTATCCACTTTAAAGTGATAGTCTTTGTCAGCCTTTAGTTCACAGCGAAAAGGTAGTTCTGAGGCCTAAGAGGACTCATGTACATATCCATCGAGTCTTCCATGAGGTGGAGGCGCGCACTTCGGTGTGGGGGAAGCCGGACGGAAAACAACTGCCTCCTGTTCCACAGAACAGACGCGCACGACGGAATCACGCCAAGCCTATTTGAAATTTTAAACATACCTTATGTGAATAAGTATGCCCATATTCCCTTCTTTTTATATAAATTTAAGACTGATATATATTTTTTTAATTACTCAGGCCCCTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTCGAGACAGGGTTCTCTATATAGCCCTGGCTGTCCTGGGACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGACTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCACCACACCCGGCTGGCCCCTCCTATTTATTATTAAGCAAAAACCTATATAGTACTTTTAAGGGAAAAAATTGTCACTTTGAATTTTAGACTGTCATTTGCAAGTGACTGTATCTATCAGTTGAGGGGCTTGTCCTGATTTTATTGTATAGACCTGCCTGTCTCTGTCTCCTGTGTCTGCTGTGTTTTAGCTCAGACATTGTGCTGCACCTGTCCACAACCCTGTCCCTTTGTTTAGAGAGACAAAGAAGTATTTCTGCCTTCCTCCAGATTCTGGCTGAAGCAGAATTAGAGCTGCATTTCTGCATGCTGCGAGCACAGGCCAGTAATTCCCACAGGGCAGGATTGGGCTGACCTGCGTGCCAAGTTTGAGAGAACCTGAAGTGGCTTGGTCTCCAGGAAGTCACCACAGGTTTTGCCATTGGCCCTTGCATTGGCTATATTCAGTCTGTGTGTAACCTGGAGCTGGTTCCTGCCTTTAGGAGAAGCTCCAACTTCTGTGTGTAGACTTCCCAAGATGCTGCAGGGCCTATTAGCAATGCATATGAAACCTAAAAGGGACTTTTCTTTCTTTCTTAAGATTTTTTAATTAAAGATTTATTTATTTTATTATGTGAGTACACTGTAGCTGTACAGATGGTTGTGAGCTTTCCTGTGGTTGTTGGGAATTGAATTTTTAGGACCTCTGCTCAGGTTGGCCCAGCTCACTCAGGCCCAAAGATAGAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGGCATCACATCTCATTACAGGTGGTTGTGAGCCACTATGTGGTTGTTGGGATTTGAACTCGGGACCTTCGGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCTCCAGCTCAGTGGGGGCGTTTTAAAGGCGGTCTTCTGTACTATCTGTTTGTGGGTCCCTGCTCCTTGACTAGGAAACCTCCTTCCCAGCTGCTAGTCTTGTGCTGTTCTGGAAAGCTTTTGCTTTGGTCTGTTTTCATTCTTTCTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTTGTTTTTTTGTTTTTTGTTTTTTTTTAAAGAGACCAGACCTCTTTTTCCGGCTAGTCTGACTACTCCCCACTTTTTACACGAGACTTTTTAGGGTGTAAGCTTGAGTACTAATTACCGTAAGTTGAGCGCCATTTTGTAGAAGTTATGGCTGTTTTTTCCTATCAGCCGTATGCTCCCAGAAATAAAACTCAAACTCAGAATATATTTACAGATACATTGATCATATAGCTAGGCTCTACTCTAATTAGATCAGAACTGTTGCAGTAGGCATAAAGCTGCTGACTTGCCCCGGCAGAGTGAGTTCCTCAATATTCTGAGATCCCGAATGAAATACCCCCCCCCACACACACACACAGAGCCATATATTTAATATGCCTTAATGGCTGGACCACTCCCAAGCATCCACATGGCTAACACACTCTCCCCTCCCGTATTCCTGAGTTATTACTTACTAAAACTTATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAAACATCAAGACCAAAAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAACAGGTCAGGAAGCAGGAGCTGATACAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTACCCTGGCTTCTCAGCTTGCTTTCTTATAGAGCCCAAGACTACCAGCCCAGGGATGGCCCCACCCACAATGCCCCCCCCCCTTGATCACTAAATGAGAAAATGCCCTACAGCTGGATCTCATGGAGGCATTTTCTTACCTGAAGCTCCTTTCTCTGTGATAACTCCAACCTGTGTCAAGTTGACACACAAAACCAACCAGTATACCTATATTCCATCCTAGCCACCCAGGACCCTGTCGGGAGGGCCCCCTGGGGCCACTCCCTGGCTCTTACATGTTTGGTATGCGCTCTCTTCCTACACTTCTCAGGCCTGAGCTTTTTGCTTTCCCAGCATAGTGGTTCTCCTTTTTGCTCTTTATCCCCTTACCCATGAATCTAAAGTGCCTCTGGCAACTTACTTAACAATCAGAACCAACTGGGGACAGGGACCCTCAGTGCCTTACATATAGATTCTCATGCAATTTTGGGAACTCAAATAACATAATGCAAGTGTTAGAGCAAAACCACAACAAAACCTTAGATAACTCAATTATTTTAACTTACATTCTGCCACGTGACTGGTTACCTATGCTCGGGTACCGTGCATCAGTCTGTCTCCTCACACTTTCCCTGTGAATTTCCCTAGGCCTGCCTCTCTCCCAGAATCCTTTCTCTCTCCCAGATATCACACCTCTATTTCCTGCCTAAGCCATAGACCATAGGCTTTTTAATTGACAGGCGATGCATCCATACAATACACAAGGCATTCTCTACAGGTCTCACTGTGTGAATAGGTTTGGCCCCCATAGACTCATGTGTTTGAATACTTGGCTCTAGAGAATGGCACTATTAGGAGGTGTGGCCTTATTGGAGGAGGTGTGGTAGTGTTGGAGGAAGTGTGTCACCATGTAGGTAGGCTTTGAGGACTCCTATGCTCAGGATCTGCCCAGTGTAAGAGATAGTCTCCTCCAGCCTGCCTTCGGATAAAGATGTAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGTCTGCACGCTGTTGTGCTTCCTGTCCATGATGACAATGGACTGTGCCGCAGACCCTCTTGGCCCCTTGTCTGCGTAGAACGGGTTTCTGGTTGCAGATGGACAAGGAGTCGGTGAAACGAATGTCAGACAGACGCAACACAGGAGATTGTGTAGAATCTGAATGTATTATCACAAAGTGAACACCAGTCTTATATAATACAGAAAATAAAGGGGGTAGGATGTCACAGCAGGCAAAGTACATTGAAGTTACCTGACACAAAACAAAGGAATGACCTCAAAAGGACTTACAGGAACCAGGTAATATTTACAGTAAAGATAAAACAGCTCTGCTTAGGGTCAGCTAATGACAGGTAAGGATTTCACACCCTAGTCACAATTTGTGCTACTCCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCATGAATGATGCAATACCACAACCCCCCTATTTCCTAGGCCCTGTAACTTGGCTGTTCTTTTAAGTATCTGTGGAGAATCTCCGTTTGTCAGAAGAATTCACCAACTTGCTTCTAATATGTAATGTAGCCTGCTATACCTGGCTGTAGTGAAGATTCCTGTCTCAGTGGGATTCCCTAACTTTTACATGATAAACCCACCTATTAGCTAGGCCATTGTGTATGGGTGAGACTGGCTACTGCCCTAAGTAATCACACTGCAGACTCGCCCTGAGCTATTCTAGCTCTGTTCTTTGTAATGCCTAATTAGTTTCACTATCTCTTCAAGCATATTCTAGGACATTGGAACACTGATGGAGGCTTAGCCATGTCAGAATTCAATCTGAAAAGGCACTTATAATAAAATAATACTAAAAGAGAGCACGTGGATCCATACACCAGACTAATGCGGAGATAGGCACCTGGTTCCAGGAAGTTAAGTTTCCGTGAAACTCTTTGCCTCGTGAGTGCTTTCAGGCCTCTCGGCCTGCCAAACAAACTTTACTGGAGTGTGGGTAGCAGGACTGAACCTCTGAAACTGTAAGGCAGCCAGCCCCAATTAAATAGTGTCATCCTAGCTTGGTCATGGTGTCTCTTCGCAGCAATGGAAACCCTAACTAATACACTGTGCACCCTTGGCTGGCCTAGAACTCGATGTATAGACCACCACTCCTAGCCAGGGAAGTCTTGCTATGTAGCTAAGTCTGGCTCCCCACCCCAGCCTCCCTTGTGCCTGGGATCACAGATTGTGAATCAACCACACCCAGCTCACAATTATACAAACATTTTATTTCATATTATTTAACATTTATTTCATCTTCAAAATATAATGCAATATTAGTACATCATAGTATTTATTCATCTCTGAGTGACTAATTGTTCCAATGCTCATCAGCTGAGAAAAAAGCATTTATCTTAACAGTTTCTGTGGTTTATTGGATGGGTATATCTTTGATTCTTGAACAGAGTCTTGAATAACACACAACAGCAAATGTTCAAAAAGACTGAGGCCATCTCAAGGCGCACTAAGGAGAAGATCTAGTTCTTACATCCTCACAGGAACGTTTGAGACTTGGTTTCTTGCGGTATGTGCTAGGTTACCTTACAGTGTTACTGCCAGACTTTCCTAGGGAGACAAAGAACTCTTAGGAAGGAAGTTACATTCTCTGAGAACCTCATCTATGACAGAGCATCCCATGCCTTTAACCCATTATTATCTCTTCAACTGTGGTTGGTGAGGTCAGCTCATACTTAAAAGCCTAACACCAGTGCTAAGAGTCAGAGACTACTGAGGTTGTCTGCCACAGAGACACAAGCCTGTGTCCTGCAAGGCCCCACGAGAGTCACTTCACATCAGAGATTGTGTTTTTCAG
Seq C2 exon
ATATCATTTGAGGATGTGGCTGTAGACTTCTCCTGGGACCAGTGGCAGCTGCTTAGCCCTACTCAAAAGAGTTTATACAGAGATGTGATGTTGGAGAACTGCAGCAGCCTTGTCTTCTTGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000023284:ENSMUST00000112528:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.231 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0135222=KRAB=WD(100=100.0)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types