MmuINT1002127 @ mm10
Intron Retention
Gene
ENSMUSG00000083193 | 4930595D18Rik
Description
RIKEN cDNA 4930595D18 gene [Source:MGI Symbol;Acc:MGI:1925312]
Coordinates
chr12:111161759-111175006:-
Coord C1 exon
chr12:111174909-111175006
Coord A exon
chr12:111161860-111174908
Coord C2 exon
chr12:111161759-111161859
Length
13049 bp
Sequences
Splice sites
5' ss Seq
TGGGTAAGC
5' ss Score
8.84
3' ss Seq
TCTTTTCCTCCGTTCGATAGATA
3' ss Score
8.64
Exon sequences
Seq C1 exon
ATGCCCTGGGAAGACAGATGAGCCTGGTCCTCCAAGAGCTGGAGTTACTAGCCGGTGTGAGTCAGCAGGCACAGGTGTGGGAACTGAGCTCTGAATGG
Seq A exon
GTAAGCAATCTCTCCAGGACCCCATTACTCCTCACAATTACTTTCCTATTGTTGCAAAACATACGTAATATAAAATGTACCATTTCAGCCATCTTAAGGATATAGTTTATTGACATGAAATTATTCATAATACTCTCAGCAGGACCCATCACCACAGCTCTGCATTCCACAGAATACTGAATCTAGAGATGGCAAGGCACTTGACACCACTGTCAGTTACAGGAAGAACCTGAACTCAAATGTCTGAGTCCTCCCACACATGAACGTCTCACTTTTTAAGATCTTCTTATTCTATGTACATGAGTGTTTTGCCTGCATGTATGTCTATGCACTGGATATATGCCTGGAGCCCACGGAGCCCAGAATCCCTGGAACTGAAGCCAATAACGGCTGTCAGACATCAGGTGGACATTGGGAATTGACTCCAACTCTACTGCAAGAACAAGCCAGTGCTCTTAACTACTGAGCTATCTCTCCAGCCTCAAATGTGTCTCATTTCCATTTACATTTCAGGCTGAACTGTGTTAAAACAAAGGAGGAAACAACCCCCTTACAAAGTTTGTCATCTCACAGCTGGGCAGTGGTGGCACACACCTTTGATACCAGCGCTTGGGAGGCAGAGTTCTCAGGTGGGTCTCTCAGTTCAAGGCCAGCCTGGTCGACAGAGAGAGTTCCAGTACAGACAGGGCTACACGGAGAAACCCTGTCTCGGAAACAAGAAACAAAAGTCTGTCATCTCAACCTAGAGCTCTATCAGAGAGGCAGCAGAACTTGCTTGAGTCTGGAAAAGGCAGGAGAGTGTCTCAGACACACGGATGTCCTTGGTTCTCATACCTGTAACCTACTTTTGTCGAAAAGAAAACTAACAGCCCCCTATCAAGCCAGGGACTTGGGCTGAGTCCTGGTGTCCAGCCCTCCCTGGAGTAGGAACATGTCCAGGAAATAAGCGCCATACCTCTGGCCCAGCAGACCTGAGCCTTTCCTGGTTCCACATCAAAACTTCACAGTGGCTCTAGCCGAAAAGCTAGATCCTCTGAAACAGCCAGCATCACTTCCCTGCTAATTGGGGGAAAGGCCTCTTTGCTTTTAACTTATATTCCCATAAGCTCTCTGTAGTTATAATTAAGTTTTCGATAAATGGGTGCTGCGCTATAACCATGATGCTCTCTACAGAGTGACCAGGCCTCAGGGACTTGTTCACCACTAACAAGCTAATGTTTGTAAAACTCTGTAAAGATATGATGACTAAATACTATCATTATTAGTAGACTACTGGTTTAAATGTAAATAAAGAGAGATAAAGAGGAAAGAGAACACATTAGTAAATCTGGTTAGGGACTGCTATATACGGCAAGATGTACTCAATATCTGAACCACTAGGGTAAAGAGTACCTGATTTTTTTTTTCACTGATGGAGATAAAACCCAAGGCCTTACTCTAGGCTCTACCACTGAGCTTCAACCCCAGTCCTTAGCTAGGCTTGTTATGAATACAAGTGTACAAGTGTTACAGCTAAGGAATGAGCACTGACTAGGGAGGAGGAGCCAAGAAGATGTCAGTAGAGAAAGGCGGCATGAAGAACTGCTCTAACAATCCACGATGTATTTGAAGAACACTGGATAGGGAACAAAATAAAATCTATACTCACAGAACAAAACCAACATATCTACAAGTGAGTAAAATCTACAGCTGCACTGGAACCAGCTGCAGTAAGACATGTCTGTAAACCCTGTCAGCACTTAGAGGCTGAGTCAGGAAGACCAGAAGTCCCAAGACAATCTGTGCTACATAGTGAGCGTGAGGCCAGAGTGAACTGTATAGGGAGACTTAGCATCAGAAAACAAAGCCATCAAACCACCTGCTTAAAGCGCACGGAGCTGTGGTGAAAGCAGGACCTCTAGAAAAGCCCTCTGCTCTTCCTCTCCTCTCCTGCCAGGGGTGCGGTTCCAGCCTCAACAACTAGTCAGTTCCCTTTTCCTGTTCCCTTTCCTATGAAGGACAGCCATGGAATCACCTTAGACTCATGGGACTTAACTCAATGACACTCCTCTTCATCTCGGCTGTCTTACTCCAGTTACGCTGCAAGGAAATTCCCTGCATAGCCTGTTATCCAAATCCCACAGCACTCATGTTCACCTGTTACAGCCCCTACCATGTCATCACCCAAGGATTCTCCTCGCTTGGCCATGGCATGGAAGCCACCAGAGTGGTTCATGTTCCAAAAAGGAGGAAGAGAAGGAAGAAGAGGAGGATGAAGAGGAGGAGGGTGAAGTAGTAGAAGAGGAGGAAAAGGGGGGGAAAAAAGAAAATATTTAGTTTAATTCAATACAGGTTGAAAATCCCTTCTTCAAAACACCTGGAAACAAAAGTATTTCAGATGAGTGGTTAGAATCTGGGGCTTCGAGGAGAGCCATGAATAAATACAAGGTATCTTTTGGAGAATCAATTCTACTAAAAGATTAGGAGCAGAGTATGTTGATGCTAGAACAGATCATTGAGTACAAAGTATCTTCACAGTAAGATGAAACTCCATGGGCTTGCCTTGCCCACCCTATGGCAGTAGAGTCCTACAGAAAAGCCTCCTGAAACCCATACACTTAATTTACCCCATAATAAGGCTACAACAGACACTATTAATCCAAAAAGCACAGAATTTAATTTCCAGTGTAAAGTTAGGATGTCTAAGCATTAATGGGCAAAGTGCTCCTGAGAACTCATTTCCCTGTTCTTCCTAGAAAGTTACAAGTTTGTATAGAAGAAGTTTCCCTACCAGGTTAGTGATGCAAAGTTTCCCTACCAGATTGGTGGTACACACCTTTAATTCCAGTATTCTGGAGGCAGAGACAGAGACAGGTAGATCTCTTGAGAGTTTGAAGCCAGCCTGGTCTACACAGCAAGTAAGTAGAGAGCCCCTGTTTCAAAACAAGAACAATAAAAAGTAGTCGTTTCCCAGTGTGTAAGTCCCTCTAATGTATCATAGCTGCAGGAGGAGTAGCATCCAGGAAAATGACCAAAGGAGGCACTAGGTTTAGCTACAACACAGGCTCAAAGCCCAGTGAAACTCTGAGGCCTGTCATGTCTTCTCTTCCCTCCCACCTTGGAGAATCTGAGCACATTCACCGAGCACTTGCCATGTGCCTGGCCCTTGTGAAAGGAGCTCTGCGTGGCACACACCTACCTACCTCCTGTGCATGCAGACCTCCAAATGCACACTAGCCTGACAGAGTTCATATGTCCACCTTGGAAAGCCTCTTCAAAACTATTATGACTTAGCCTGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCGGAGGCAGAGGCAGAGGCAGGTGGATCTCAGTGAGTTTGACACCAGCCTGGTCTACAGAGTTCCAGAACAGCCAGGGCAGCCCGAGAGCCTGTCTCAAAAACAAACAAAAGTCTTCGTGACCCCTAGAGCTACTTTTTCCCTGGAACGCTGCTTCCTACTGTCTGAAAGGCTGTATCATTCCACTTGGTTTTTCAGCTTAACCTTTCTCACTGCTTACATGATACCAGGCTTCTCATTCATATGGCCCTAGTGGTCTGGATGTATAATCAGTGTTTGAACTGGAAAAGAAATTAGGATATTAGAACAGCAGTTCCTGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAAACACATGGTGGCTCACAACCATCTGTGATGGGATCTGATGCCCTCTTCTGGTGTGTCAGACACACCAGCAATAGTGTATTCATATAAATAAATAAATCTTAAAAAAAAATAGCAGTTCCTGATACTTTTCTCAGGAAAATGGCCTCATGAAAAGTTACCAAATAGCTCCATTTCATTGTTTCCCTTTACGTTGTTTGTGGAGGTCAGCGGGCAATCTGCAAACTCTGCCTCCCTCCTTCCACCAAGCTCAGATCATCAGGCTTGGTGGCAAGCCCCCTTGCCTACTGAGCCATTTCACTACCCTCTATTTAATTTTCAAATGGTTCAAATCAACAGGAAGCAAATTTTCTTTTAAAAATGAAATCATACAATGAAACATTGGGGACTGAGAGACAGCTCATGGAATAAAGACACTTGCCTCCCAAGATGTTAGGCTACCTGCCTGAACTCTACCAGCAGAACCCATGTGACTTTGAAAACTGACTCCACAAAGTTGTCCTCTGACCACTACATGCCCAAAGTGGCACGAACCCACTGTACACACACACTGTACACATACGATAATAATAATAATAAATAATTTTTAAAGATGAGACACAGGGTCCGGCATTTCATTTCTTGAGAATGAAAATGTTTCAGCCCATCAGTAAGGAGCAGAGTGTAGATGTGGAGAGATGTGTTCTGTCTCCACCACCACCACCACGGCCTTTTCAGATTTCCTACCTACAACCGTGGTTCTCAACCTGTGGCTCATGGCCCCTTTGGGAGTGCCATGTTAGATATTCTGCATATCATATAGTTACATTATAATACATAACAGTAGCAAGATGACAATTATAAAGTAGCAATGAGATGTTATGGTTGGGGTCACCACAACATGAGAAACTGATTTAACCGCCACAGCATCAGAAAGGTTGAAAACTATGGACATACAAAGCGAAACAGTAGGCACAGCACCGTGCGACGGCTCTGTCTGGTGTCACTGTGTATCCCTTCCATAAACCATGCCCTTCAGTCAGAGGCAGCCAGACCACTCGGCTCCAAATCACACGGGAGCCTGCAAGAGCAGAAGGGCAGCACAGGATATCACAGACTGAAAAACTGACTACCAGCATCATATAGACCAGCAGGGAGGAACAGGGCAGCAAACTCACAGGTCTCATCTCATATGGTAGAGGTCCTCTACTGCCATTCGCAGGCCCCTTACAAGTAGGGCCAGATTTCCTAAGGCTGAAGCCAACTGGGGTGCCTTTCCCAAACATATCTCTGACTAGTCTGGGCAGCCAGGAACTTTCCCCTTACAGTAACACACACACACACACACACATTTGCAGACTTCTATACACAACCCACTAACTCATTTCCCCCTACAAAAGTGGACAACTTTCCTTGGTTTTCCTGATAGAGAATCAACTCTCTGAGGGTGGGACAGTGGCTTGATTTTTTCTTCACTCTTCCTGCGGGAAGTTCCTGTGCTGGGGTCTCAGGCAAATCTTAAGCGAGCTCTGGCATTGCCCTTCACTGTCCACCGGGGCCCAGACGCCCCAGATTTCTACAGATCAAAAGCAGGTGCTGTGACTAACTCATGCTAGTGTAGTGTAACTAGATTATGGGAACTCAGGGCACGTTAATTGAACATTAATTAAATGAGCAAGACTCCCAAGTCACAGTTAATATAATGTGCTTGTCTGAATGCAGCAAGATGCCAGCCTGACTCCTGGAGGGGCCAGAAGCCAACAGTCACTTGCAGTACTCACATCCCGCTCCCTGACAGGTGACCCCAAGTCTGTAAGCACCAAGAAGTCTCACCAAACAAAGGGTCTATATTTGATAGAAACCTCACCTACTTCTTCCTAGATTGGCCTGTCATCCCAAATCTTTCCTGGAATAGGCAAAACAAAAAAGGCCTTCCAAAATCAACAGACATTTTAATTAACTAAGTATCATAGAAATTATACAAATATATTTAATGTTCCTTCTTTAGTTTTTTTTTTTTTAATAGAATTTTCTTTTTCTTTCTGTCAGCTCCTCTGGGACCGCACCAGTTCCCAGCTACCTCTCTACTCCCTTCTTGTCTGCAGGCCTCTAGGCTGCCCTCGCTCTGGCTCCAAGCCTAAGCAGTCTCACTCTCAAGGCCTCGGCTGCCTCTCGCTGGTCACCTTCCAAATCCTTCAGCCTCACCTTCCTCACTTCAGCTCTCTTCTCAGCCCCCCTCTCTGTCTGAAATGTAATATATACATATATATATATATAATATATATATATACATATATATATAATATATATACACATATATATACATTATATATATACACACATATATATACATATATATATATATATATATATATATATATATATATATACACACACAAATATCAACCAAAAACAACTAGTTTTTCTTCTGAAAATACTTGCAAAGATGCAGATAGGGGTTCTGATTCCACAAAATCAGACTATGGCCTTGGGTTATGAGACTTCTCTGCTAACAATTCTGAAATTGACTATTGAGAAGAAATTAAGCTATTGCATAATATTTGATAGGTTAGCTCATTTGCTGTCTGGAGAGTCTTACTATACAAGATGAAAAAACAAAGATGGGCAAATTTAATGCAATTTCCTTTGTGTGTTTGAGCTAGCTCAGGCTTGCAACACCACAGTGACAGTTTCATCTCTCCTGAGGTAGTTTCAGCATAATAAAGAAGGATTTTAAGGGAATGATAAATCATGCTCAGCCTTGGGCTCATTAGCATATGTATCCTGACAATACCCCAGAAAGTCCTTCCTCATTCACACTGATTCTAAGGGATCCTAGCAAAAGTGTTTAGAGAGAAATCTCAGACACAGGGAGAGCAAGCATCCGTTCCTAGATCCCAGGTAAATGAAGGACTTTCTTCAAAGCACCAGCAAGAGCAGCAGAAACAGACTGCTGCTACTGCCTGTTTCCAACGGAATGTCTCTGCAGCCTCCTCACTGAGGCCATCTTATTAATTCCAAAAAGAATGGATAGCATCCAAAAAAAAAAAAATTGGTTTTCTTTTCCCTCACAGAAAAATTCACATGAATGTCTTGTTTAAAAAATGCTGGAATTCTCCCTGGCCAGATTTTTGATTCCCCGACTTCTGCATTGTGACAGCTGGAACAGATGGTGTCTGGGTGAGACACCTTACATCTTAAACCTTGTCCCTGATAAGGTCTGATTTCAAACAGTGAGGCTGGACCCCAAGGTCTGCCAGGATGTATCACCAGACCCTACACACAGGGTTTTCTGACTCCTGTGATAAATTTCCCAGTTTTCAATTTGCTCTGGCCAAAGAATTTTCACCTTCAGACTAGTTCTTAATATATAAGATGTCACAATATGGCGAAAAGGGAAACATTTCCTCTCCTTTAAGTAAAGGATGGCTGTACACTATTTTGCTAAACACCCTACAATGATGCAGTATTTTCAACAGGCCATTTTCCAAGATCTGAAAAACACCAGAAGGTTTTAAGAGCTGACTGAGGGTTCCCCTGAACAATTTCTACATATAAGCATTTTACACACAATACAAAACAGCATTTCTAAAGATTTCACTTGTGTATCTAGTCACAGAAATGCTACCAAAAAAAAAAAAATTATGGCTCCTCTTCAGTTGTATGCTGTGAATGTAAATTAAGATGACAATACAACACTCGATAAACCCTTTAAGACTCCACAAAAAAAGAGCATACTTACAAATGTGTGTACGTAACACACACACACACCCTTCTATTTCATTCTCAAAACTGAGTCAAAGCTCAGTACAAAAGCCGTGAAAATAAAATCAGTTCCTTCAACCGATCATTAATCTGAATGCTTCTTCGATTTCAGAGCACGTCCACAACACTTCACCCATTTGCATGTTGTTGCCGTTTTAAATTAAAGGTAAAGAATTGTCCACGCAGAATTCTCTCTAAAGGTCTAATCCTGATACCCGGGTCCCCAACCGGTGGTGATGACAGTGTAGAAACGTGGCGAAACGTACATGAGCCATAGCCTGGCGCCTCCAAAACCTGCAAGCCCCGCGGCAAGGATCGTTTTAATGGCTCGCCCGTGGGGAGCCCACTCTGACCTTTGGTGTTAATCGAAGGTGGAAGGTGTGCATTCGGCCCCAGCTGGATCCCAGAACCGCCTGCCTTCCAGCCTCTCTGCAGCTCTCCGACTATGAATCAGTCATTCATCTGCAGAGCAATGACTCAGTATAAACTTTTAAATAATGGCTCAAAAACCCACCTCCACCAGCCAGGGCGAGCACGCTCATCTATGCGGGCACCCTGTCTCCGCCGCTCCGCACCGCGCCAAAGCCCCGGGCCTCGGAGATGCTGACGGCTCGGCACCCCTCGGGGCGGGCACCCAGGGCTCGAGGCCTGCCTGCCCCGTCTGCCCGGAGCGCCGGCGCCTCGGGCCCGGAGCTGGCCGCACACACAAAGTTTCCAAAGTTGGGGCGGCGGGCGGGCCGCACCGCAGACGGTGAGGCGGCCGGGCCTGGCAGCGAAGGACCCGCCGGGCCCGGGGCCGCCGCCGGGATGGAGCCGCCCGCCGCCCCGCCGCCCGCCGCCCCCGGCCCGCGACCTTACCCCGAGGCCCGCCCGTTCGGCCGGCTCAGGGGCGCCGCGCGCATCCTCCGCCGCCTTCTGCAGCGTCCAGCTCCCCGGGCAGCCCCATGTCGGGGGGCGGGGAAGGGCCGGCGGCCGCCGCCGCCGCCGCCGGCTGGAAAGTCCCTGCTGGGCTGCAACCCGGCTCGCGCACGCGGCGGCCGCCGGCCGCGCCGCCTCACGCACCCTCGCGCTGGCACTTCCTCTCGCGCGCTGGAAATCCCCGCGGGCCGCCTGGGCGCGCGCCCCAGCGCGCCCGCCCCCGCCGCCCGCGCGCGCCTCCCCGCCCCCCCCCTCATCCCCTTCGGCTGGCGCGCGCCCGCGCCCGTTGCTAGGGACCCTCGGCCCCGCGCTCGCCGCCGGCCTTAGCAACGGCGGCGCGCGCCCCAGGCCCTCAGGGCCCTGGCCCCTCCGCGCGCGCGCGCGCGCCCTCGCGCCCCGCCCGCGTCCCGGTCTTTCCGGGTCAAAAAGCCAGTCGAGCGGAGGGGAAGCAAGGAAGGTTCCTCGCCTTGCCACCTCGACGGGCGGCCCAACAGTCTCGCCTACTCGGGCACTCAGGTCCTTGCACCTGTAGAAGACACTCACTCGCGGGCGCCCATTGACACGCGTGCAGAGTTCGTTCCTAGTGTCTCCTGTCCAAGAACACACATCTTCACCGACAGAGTTCACAGGCAGGCGGGCAGGTCTCACAGTCCACATTAGCACACAGCCATGCCACCCTCACACATGCCCCTCGTATGCTCACAGGCGGGTCTGGTACCATCTGACCCAGCTCTAGGGGTTTAGCAGAGTCCTCCTCGGCTCCCTACATACCCACCCGAAGTGGATCTGCCCTGTGTGGACAGGGTGGCCAATTTGTCCTGGGTACTTCTCTAAGCCAGGGACACCCATTTCTCCAGCAGCTTCATCTTGCTGTCTCATGGTCACAGGGCCCCACCAGATGTCCCTACTGCCATGGCAAGATGGGAGCAAATGGGGGTCTATCCTTACAAAGTTCAGACACTTGAGCAAAGAGGCCATGATTGTTTCCAAGTCATCTGGAAGCTCACACATCCCTTCTCAATAAAGTTTGTCGGATCCTAGGCTGGAACGGAGACCAGTGTGACCAGGCTGCGCAGGAAGTCCAGCATCTTCTGTCCAGCTTACCTCATGGAATGTTCTAGAAGCCTGGATAGTCTGACAGGACATCTCTGAATGCAGTAGCCCAACAGGTGCCTGTTCGAGAGCCCACATAGGCCTTGCTAGCCAGGCTCAGCTAGGCCAGTGGCGCCCTCATCTGGGCCACAGGCCACAGTTCTGAGTTCAGAGTCAGGTCAGATCCAGGGTTCCCCAAGGCAACAGTGCTAGAACGACAGTCCCATCTATGAGGACCCTGGAGCTCACTATTAGCCCCTTTCCCCTCGTGGGTGTCTTTAATGGCCCGGAATGCTCAGAGTGCCCCTGCCTTCTTTAACCGTGTTCTCAGACCTCTACTGTTCGACCCCAGCCCTGTCCAGGGCACCTTTCTCACACGCCTTTCACGGCACAAGGAAAACTGCCCAAATCCAGAAAGGCTTCCTTCTCTAGGCTGCACTATTTGGACTCTTTTCAAATAAGCCACCAGGCAGAAGGTACAAAGACCTGTGCGTGGGGCTTCCTATGGCTGCGTGGCTCCTTTTATTCTCTGCCAAAGCACTAGTAAGCCTTCTTCAGAATGAGTGGGTAGAGTCCAGCCGCGTGGAGCTCTCTACGGGTGAGACCAGCTGCTGCTCCCCCACCCCGAGCCCTTCTTCTCCCATTTAGCAGCTCCAGACCCCCTGTTTTGGGGAAACACAGAGGGCAGCATAAAGAAGTTTGCCCCATCAGAGCCAGGGCTTTGGGGGCGGGTTTCTGGCCACCGCAGCGCCAGTTGCTGGGCAGAAGTGATGAGCAGTACGGAGAACCAATCAGAGGGCTCTGCTCTGGGCATTTCAAAAGCAAAGCTGGCTGTTCCCTATGGCAACGCTGAACAACACGCCGACACTGTTTCTGGACAAAGAAATTTCTCTCAGGAATTTATGTGGCCTCTCATGCTCAGTTTGCTGCATTTTAGGATGCATGCAGGTCTCGTGATGACTCACCGAAATGCAACTGTCCAGAAAGCCGCTCCCATCTGTTGTGCTAAGAGGAAAAGTATTCGTCGCATGGTGTCGGGGGCTTCAGGCCTGTGAACAGGTGTCATCAGGCCCCTCCCAGTGCCTCAAATGACAGCTCCAGGAGCAGAAGCCACCTGCCCCTGCAGGGCAGATGTGTGCTGAAGTGAGCTGACATTTCGCTCACTAAAACATTAAATACTAGCAAAGGAGAGACACACAGCAAAATTATAGTTTCAGTAAGACTTCTCAGCAAGTAGCTTTCAAACCTGTTGAATATGTGATACACACCCACATATTCATCAATACTTAATCCCAAACATGTAATGTGCTCTGATTATTCTGGTCTACTTGTTAATGTTTAAATGATTTTAGTTACTTATGTATCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACTGTGCATATGGGAACACACATCATGATTAAGTGTGGCGGTCAGAGGACAAAAGTCAGTTACCTCCCTCTGCCTTGTGGGTCACTGGGATCAAACTCAGATTGCCCGGCTTCACAGCAAGCATCCACACCTACTGAGCCAGCTTGCTGGCCCTATCTAGCTATTAATTTTAATACAGGGTTCCACTATGTAGACCAAGAGAGCCTCAAACTTGAAATTCTCACCTTCCCAAATGCTAGGATTACAGGCAAATTCCACTGCTCCCTAGCAAGCTTGGGTCTCTCTGGAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTCTGTAACCAAGGCTGGCCTCACGCTCACTATGTAGCTTCTATTACTTATTTTTATTATACTTTTAGTTATTTTTATTTGAGGTGGGGCACACTTGTGGAAGTTAAAGAACAATTCACAAGAGTCTATCCTTTTCTTCTACCATGTAAGACCTGGCAATCAAATTCAAGTCAAAAGGATCGGAATCGAGTGCCTTCACCACTAAGCCAGCTCAGCTCCCAATTTTATTTTTATCTATTTTTATTTTTATTTTTTAAATGCTGATCATGATGTCTAAACTTACTGGAGATTCGTGGCCACAAGTCCAATACAACATCTTTTGACTAAAAGATGCTGATGATGGTAGAAGGGTCCCAGCTTTGAGGTGACACTGCGTCCCGTTCCTGCCCAGTCCTGTCCCTCAGTGGACTCCTGCACAGAAGAGTCACACTATCAAAGAAGTGGGCTACAGGTCAGGACAGTTCACACAGGAGACACAGAGAGGCCTAAGGGTGACAGAGCACATTCCCAGGTCTATATCATGCTGAGGAGATGGAGGGCAGTGGGGAATGGGGGACATAGGAGGTTGGAAATGGGCCACATACACAGTTCCTTTCCTTTTTTTTTTTTTTTTTTTTTCTCATCTCTGTAGGCCAATCAGGAAACAAAAGTGTTCTCATTTTAAGGGATTCATCCCAGGATTCTTGTGTGCACATGTGCACACATGCACATACCATCTGTGCTTTCTCAAACACTTGCCTGAAATTGTACAAGGGAAAGAGAGTCCTGACGTGGTCTTTCTCCACCTGGTAGTTTTGACTCAGCCCCTATCTTTAACGTTTCCTGAAGATACATCCCACTCCACAGCTCTTCCAAGAAAAAGGGCTCTTCAGTGAATGTCACGGGAAGCAGGGGCATTATTTGCAAGCCCCACACAGCAAACCCCAGGAGACAAAGGGCAACACGGATTGATCTATCTATGCCTTCGGTCTGATCCCAGAGGCCATCTTTCCCTCGATGCTGGTTAGTCCCCTCCCCGACCCACAGGCTGGTTCCTTTGATTTTCCCGAACCCTTAGCAAACAAAAGCCAATGGCTGCTGGAATAGTCCAGTAGACGGCAGAGCTCCTCCCACACAGCAGCAGCCAAGGAAGCAAGGTGGGTGGAGCTACTCCATCCCGGGGGTGGGGGTGGGGGGGAGTGTCTAGAAATAGTAAGAATCATTCTAATCCTAGGCAATGCGACATCCTATCTTCCTGAAAACACTGGGAAATGGCATGCTCCCTCATCTTTAAAGCTTGAACGCCACATGGATGCAGAGGGAAGAACCCTCGCCCACCTCCTCTTCCAAACGTCTGCCCAGACCTGCTTGCCGAGGGAGCAAGCAGTGAGCGGCTTGGCATCCCTTCAGTCCTGCTAGCACAAAGCCAAGGATGTTCCCGTTCCGTTGAGCTTACCATCTAGTGGGTAGAAACGGAAATAAATCAACCACAGGTTGATCTATAGCAAGGGAAACTGAGGGACCGAGGGAAGGCAAGGGAGAGGAAGCCTGAGCAAGGGTCAGGGGAAAGGCAGATTAGGAGGCAGAATATGGACCGGAAGGAAAAGGGGCAAGGTACCATGTGGACTGCGGCATGAAAAGCAAAGGCCTTGAGGTCAGTGAGCACTCAGGGAGGCCAGTGTGACTACAGCCAGGAGTGGGGGCAACTCCAGGGGAGAGGAGAGGAGAGGAGGAGCCAAGGATGCCAGGCCCTGCAGGTTATGGACCGGCCTTTGATTTCCCTCTGGTATGGGATGCCCTGCCGGTATCCACTGCCAAGATTAAATAACAGCTTGTAGTCCATTAAAATCAACTTACACTCTTTTCCTCCGTTCGATAG
Seq C2 exon
ATACACACAGCAAACTGGAACAACAATGACACATTATCTAACTATGTCACAAGAAGTCAGCTCTGGAAACTGCGGGGCAGAGGAGCTGCAGACAGACACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000083193:ENSMUST00000121608:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.059
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types