RnoINT0076727 @ rn6
Intron Retention
Gene
ENSRNOG00000052795 | Itpr3
Description
inositol 1,4,5-trisphosphate receptor, type 3 [Source:RGD Symbol;Acc:2934]
Coordinates
chr20:5646097-5660877:+
Coord C1 exon
chr20:5646097-5646320
Coord A exon
chr20:5646321-5660806
Coord C2 exon
chr20:5660807-5660877
Length
14486 bp
Sequences
Splice sites
5' ss Seq
GGGGTGAGT
5' ss Score
7.93
3' ss Seq
CCGGCTGCTCTGTCTCCTAGGCT
3' ss Score
8.97
Exon sequences
Seq C1 exon
CCGGATCGTCCAAGTCGCCGGGCTGCGAGGTGGCACTGCGCTCCTTTCCGCCCAGCGCGCCTCAGTCCTCTGCACCGAGCCTGGCAGCTCGCTTCTGGGCGACTTTGCCGCCTCGAGCCCCGGAGGGCCAAAGCCATGAATGAAATGTCCAGCTTTCTTCACATCGGGGACATTGTGTCCCTGTACGCCGAGGGCTCTGTCAACGGCTTCATCAGCACTTTGGG
Seq A exon
GTGAGTGAGCCTAGGGCAAAGAGGGGGGCATCGGGGCTACAGTACCAGCTGCTTGTCTCCCAGTGTCCGGTCCCTTGCCCCCTTGATAGAGGGCCCGGACAACCCAGTCTCCAGAAGCAAGGGGACGCTAGCACCCCTCTCTTAGAGAAAGGAAGTGCGCTGTTTGCTCAGGTAGTAGTCGGGTGCTCTGAGGAGTTCCAGGAGGCATCAGGGCCCATGAAGCCCGCCACTTCTGGCACACTCCTTTTCTGAACTCCTGGCTAGGGGATTTGCGTGTCCTCTGCAAGTGGTCGTGGGGTGGCGCAGGTGCCTGGTGCCTGAGTTGGAGAGGGCCTGGGTGTGCTTGTCTGGGATTGGGGGTGGAGTGCTAGGGTTGGCTCTGCCTGGAGTCTGGCACTCTAGAGCCCCATCTTGAATCGGTTTATTTATTCATTTGGAGGGGTCGCACCTTTTCACTCTCCTCGTGCACCATCCCCTCGTCAGAGTGTCCCCAGTGCAGGCAGCCCCAGGTCTTGGTCCTCCTCTCTCCGCCCCCCCTCCCCGGTCAATTTCCTGTGTAGCTACTCTGGCGCCCCTGGGTCCCTGGTCCCAGGTTCTCTAAAGCACTTTACAAACATTAATTAATTCTGGCTGTCACCCCCCGGGGTCCAGGCTGGGAATTGATTCTATCCCAGGCTGGTGCCAGGCCTGAAGCTGGGAGAGGTTAGAAAATCCCTATATCTTTTTGGAGAGCTCCTGGGCACCTCCTGCTGCAGGGATGGAGGGAGCGCATAGGCCAGGATCTGGTCTTTTTGCCCCATTTGCAGGTGGGTAGGGTGGTGGTGGCTAATGTCCTCAGGTCTCATCTTTCCAGCACCATCCAGTTGCCCAGAGGGTGACTCCTCTTGGGGGGGGGGGCTTTGGAAGTGTGGCAGGAATTCTCATCATTACAAAGTTAGCCCTGCAGGTGGGAGGCTCCCAGCTCCTTTGCTCTTTCTCCTCTTGGTGGTTGGAATTCAGTGTGCTGAAGGGAGGGGAAACCTCGAGGGCCTCTCTCCTCCCAGCATCCTTCAGGCTCTCCTACCCACCTCCTGGGTCAGATGTAGATTCCTACACACACACACACCCCTCCCCATCAGATTTCTCTTCAGAAGTTACCCAGAGAGAGGGGTGGAGCCACATCTGGGCCAGCATCTTTGCTAGCCTGGCTCAGAGCCTTGCCAGGGCCCTTACTGGGGAGTAACAGGGGAGCTGCTCTGTCAGCATTTCACATGAGGCTGTGGGACAGGGTGTGTGTTGGGGGGAGGGGCAAAGCCAAGGTGGGAGCCCCAGTCCCTGCAACTCTGCAGATCCTTGGAAAAACAGTCACATTTTGTCGACGTGTCTGACTCCGGGCTGAGCACCTTGAGGACTAACAGAGCCAAGGAAAGGATCTAAGGTCCCCTTCCCTGTCCTCAGGCAGGCAGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAGTGTTTCATGTGTACGAGTGTTTTGCTGGCGCATATGTCTGTGTACCATGTGGGCGCTCCGTGGCTGGAGAGACCAGAAGAGCGAATTGGATCTCCTGAGACTGCAGTTACAGAGGGGTGGGCCACCTCGTGGATGTTGGGGATGAAGCCAGGTCCTCTGCAAGAGAAACCAGGGCTCTAAAGCACTGAGCCATGTCTCCAGCTTCTGCTCCCCTGTTCTCAGGGCATTTTCTTCCTCTTGGTCCCGCCCGTCCCCCGCCCGTCCCCCAGCTGCTACTTTTAGTCCATCCGGATCTCAGGGTAGGTCTCAGGGACATCTGAGAGCCCTTGACCCCAGGGTACTCCTTCCTATGTACTCTCCCCCCAAAAATTGGCAGGTGCTTTCCCAGCCTGGCCCCAGTGTGCAGGCCTCTGCCTCCTCATCTTCTCTCACCTCATCTTCTCATGCACCAGAAGTTCAGGTGCATTTCCTGGAACCTCCCCCTGGTCTCTTTACCTTTGCTCCCCTGTGACTCCCTGAGTAAATCTGCCCCACCCCCTGAGACCTGGCCCCAAGTGGCCTCTTTCGAAAAGAGCACAGACCCCACCTTCCAGGGTAGAATTAATCCTGCTTCGGTTTTCATTTTCTGTGACATTTTCAAACTGCTCTCTGGTGCTCTCCAGGCTCTCTGGTGCTCTCCAGGCTATGTGACCTCCCTGTGGGCTCAGCTAATGCTGTGCACTTGCAGCGTTCGTGAGCCAGCTGTGCCCATCCTATACTCAGAGCTGACCATGGAAACTTCCTGCTTTCTGGGAGCTTAGAGTCTTCGAAGAAGGGATTGGCAGTACTCTTACCAGTCCTGAGTTGCTGTATTCCTTAGGAACTTTGTAGATCACACTTTGTAGAGTGGGGTCTGTAATCCCAGTGCTCGGGAGGTGGTGGCCGGCGGACCGCCAATTGAAGGACAGCCTCTGCTATATATGGAGTTGAAGGTTAGCCTGGGCTACAAAGGTGCTTGTCTTCAAAAACAAAACAAACAAACAAACAAACAAACACACAGCAGAAACAAGGCAGACAAACAAACACTAAAAGGTCAAGTTTGGTAGACACCTAGACTCTTAAGAGTCTGCACGCTCAGTCTGACTGACAGAATCTCATGCTTCTTTCTCCTTCCCCGAAGAGCTGGGAGTGGGACCCTGGTTTGAGGCGTATTTGTCAGACAGGTTCCTGTGCACTGAGCTAGACCCGCAGCCTTCCATGCCGAGTTATAAACACAGTCCCCAGAGCCAGAAGCCTGGCTCTGTGAGGCAATTTGCTCCTCTTATTCAAGCTTGTCTGCTCCCACCCCTAACTCTGCTCCCACAGCCTTCCCTGGGGCTGTTGGTGCCCAGGGTCATGACCCCTGGGCCTGGTATGATGGAGGGTCTGGGCCAATTTCAGTGCCCAGTGTCTGGCATTCAGTTAGAGAATTTGTCGAAGTCTCAGTGGGCAGAAGGCTGGCCCAGTTGGGGAGGTGGGAGGTGTAGCAGCTTGGGGTTCGGGGCATGAGCACTTAAGGAGACAGCCAGTCAAAGCCTCCTTGGTAATTAGAGGTCCCGTGAAGATTGTATATTAACTGGGTTGAGAGGCCGGGAGGGGTCTGGGGAGTGGATCCAGCAGGCCCACACCTGTTCTTGGCAGGGAAATGTGGCCACGGCCGGCCTCACCACTCACCCAGGTGGAGGCCTAAGAGCTGGAGCCTCGGGTCACGGAGGAAGAGCGGGGAAGGCTGCTGTGGCTCATGGCCAGCTCTCCCTTACAGGAACGCAGGGTGGGCACGTCAGGTCCCATCTGGTCCCCTGGAGACTTTTTAGTGTTCCCAGAGTAGCTGCAGGCCCCCAGGGATCGAGTTGGGGGCGGGGGTGAACTAAAGTTTTGAAGAGGCATCTGTCAGGGGGACTTTGCCATTAATAGGCCTGGGGTTACATTTGAGGTGTGTGTGTACCCCTAGACCTGGGTCACCCTACCGTGGGGTAGCCAGCCTCTGTCAAGAGGTCCCTTCCTTCCTCCGTCTGTCTGTCCTTACTTAACGTATCTTGGGAGGGCGGGCACTGGAGATGAAGACCCTAAGTATGGGGCAAGCGCGGAAAGCCTCGGGTTCCCAGATGAGGATCCCTGGCCTGGGATCCTCAGGGGCAAACCCTCTGGCTCCTGTTCCATCACCAGCTGAATATTCCCACAACTCTCTCTGCTTCTCAGAGGAACTGCACCCCCTCTCCCTGCTTGGTGGGATCAAACCTAGGGCTCTCTAGTGCGCCCTATGTATCCATATACTCTCTTCTAAAGAAAGATTTAATGCTGGGTGTAGTAACCCATGCCTTTAATCTCAGCACTCAGTAGGCACAGGCAGCCTGGTCTACAGAGCAAGGCCCAGGACAGCCAGGGCTACATAGTGAGTAGTGAGACCCTGTCTAGGAAAAGAAAAGTTTATTGGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCATTTAAGTGCAGGTATCAATGGAGGCCAGAAGGGGGCGCTGGATCCCCCAGTGCTGGAGTTAGAGGTGACTCTGGCTCTAATGTAAGGGCTGTGAACTGAACTGGGGTCCTTTGTAAAGAGCTGTACACAGTTTTAACCGCTGAGCCCCCTCTTCAGCCTCATCCTGTACATTCTCTAAGGTGCTCAAACTGTACCTGGGAATGTCTTGGATATAGGGAATCCTAAAAAAAAAAATTAGCTAAGGATTTGCTAAAATAAGCAAACAAGCAAACAAAACAAAACCAAATCTAGTTCCCAGTTGGGGGTGTGGCCCAGGTCTGCCATCCCAGCTACTCAGGAGACTGGGACAGGAAGCTTATAAGGTCAAGAGCTGTCTGGGCTACAGAGTAAGTTCAAGGGCAACCAAGGTTGGTAACTCGGTGATACTCAAAGTGCAGAGAGGGCTGGGGATGCAGCTGGGTGGAGGAGTGTTTTGGGCTTGCTGAACGCACGCAATGCCCTGAGTCCAGCTCCCAGCCCTGTAGTATGTGTCTCCCAGTTCCAGATACTCAGCTGTGGGAAGCACTGAATATTGTTTTTTAAAGATTTACTTATTTATTATATATGAGTACACTGTAGCCGTCTTCAGACCCACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGCTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTAACCACTGAGCCATCTCTCCAGCCCCAGGTATTGTTTCTGGACTGAGTTCTAGTGTTTTGCACCTGTACCACACAGGAACTCACTGGGTCCCTTTGAGCCTTAATCGAGACCTCATAATTCCTGGATGAGAAAGGAACGGTCCCTCCCTAGCCCCTGCATTCCCCAGACGTATTTGAGACCTGCCCTGGCTTCATTGTGACTTCACTGGAAGGAGGTACACTCGAGTTCTTTAGCCTTAGGTAGTGGGCTAGCCTCAGCTAGTCCCAAGCTTGCAGACTCAGGTTTTGAAAACTTGTATTTTTTTTCCTGGTTTTAAAAAATCAAAAACAAAAACAAAAACAAGCATGTATCCTGGAAGAACTATGAAACAGCTCAAGTAATGTACGCGGTGGTGCTGCTGTGGCTAACCACTGTCCCTTCTGGGCCACCGACCTCGTGAGCTCGCACAGAAGCCATTACAAACAAACCAAGCTGAGCTCCTGTTGGTATCCTGTCTCCTGGACATGTCTGCCCTCTCTCGAGCTGACACCCTGTTGTTATGGTGGCACAGAATCACATGGTAGCAGGCTCTGTGACTCATGAGAGCTCTCCTGGTACCTGCCTGCTATGTGGGCTGCCTGGCAAACTTCACATTTTGCCCTGAGCATCCCAGAGCTCACAAGTCCGGACACCTGTTCAGGTGTCGGGATGGAGATCAAAGGGGAAGGCCTATGTCTTGTCTATCAGCCGGCTCCTAGGTTCACGCCGTGCTTTTTCGGCTGCTGATGGAGGCAGGACTGTGCCACCAAGGGTCTGACCCAGTTCGTGTCACATGTCTAAGAGTGTGCATGGCTGGTGGTAGTGAAAGCCTCCACCCTCTGGGTTGGGTGCAAGGCCACATGGGTGTGATGTCCCCCATGGGGTGACTCGAACAGAGAGAAGGGCCGCATCGGGGTCTGCAGAGGACAAAAATCAGTTTCAGTTTCTGCCTGGAGACTTTAGGGTCTCAGGCTGAGTGCAGCAATTTGGCCTTGAAGAATCCTGCGTTTGTCAGCTGCCCACGCTTGCCTTACCCCACATTCTTGACCTCGAGTCCCCTCCCTAGCTTGGCCCGATGGGTGGCGGCTGGGGTTGGGGGTGGGGAGAGAAGCTGGATTGTAGGGTGGGAACACACCAGCTTTCTGCTCTCAGCTCAGGGGCAGGTTTCTGGGTTTCGATAATCTTGTACACACAGCTGGGATCTGTGTGGATGTCCACTTCCAGCCCTGCCCTGTAGACTCACAACATCGATTGTACAGCAGGGGCCCCTCCCTGGAGCAGGGGCTGGGGGAGGGGGAGGAAGGGGCCGAGGTCTGAGGGAGGGAGAAGAATTTCTTCTGTTTCATCTCTGGGAGGGGTGTGTGAGCCCCATCCCTCCCCCCCCCCCAACCCCCTGCCGAGCGGGCAGGCTGACTAGCCCTGGGCCAGGCCACTAAGCATTGGCACTCGAGCCTCCCAACACCCAAGAGCCTGGGATAGGAACCAGATAGGAACCAGACAGAGGAAGCTGCAGGGCCCGCAGGAGAGGAGTTGGTGGGTGCAGGAGTGAGGTCGGCTGTTGCCCCCCTCCCCCCAGTGGTGGAGTGTTGGAGGGCATTGGCTGAGTATCACCCTCATTACTGAGGCTTGCCCTTGGGGTGACAGGAGGGACAGGAGAGGCTTTCGGCGTGCAGGTGGGCAGAACCGAGGGGCAGCAAACACAAATCTCGGCCCCAGCTGGAGCAGGTGTTTATTTGATTAGCAAATCTCGTCCCTCATCTCTCTGTCAGCCAGCTGGCCACTGGCCCTTCCTCCTGCCTTTGCGGCAACCGGTCTCCAGGTGTCCAATAGGAGACTCTTGGCGACATGGGTCAGGAGAAGGAGAATCAAATATGTCTCGGGGTGATGATAGTAGTGACGGGGATGGCTGTGGTCGCAGACCTGTCAATGACTACAGTCTCTGCTGTCCCTTGAAACCCTCACTAGCAGCCGAGGATTACCTACCTTTCAGGAAAAGCCATCTGTATGGCCTGAGGAGTGGGGGCTCGATTGGGTAGAGTGCTTAGCTGGCATGCATCAAGACCTGCGTCCATCCCCAGCACCCTATAAAATAGGGGGTGGCGGTCTGCACCTACAGACCTGGCACTCGTGAGACAGAGTAGACAGATTATGAGTTCTAGGTCAGCCTCAGCTGCGTGGCTAGTCTGTGTCACAAGAGACCCCGTCTCAAACAAACAAAAACACCCAAATCCATCTGCATGCATGTTTAATCCCAGCACTCAGGAGGCAGAAGCAGGTGGATCTCTGTGAGTTCCAGGCCAGCCAAGGCTACACGGTGAGATCATTTCTCGAAAGAAAGAAGCAAGCATACGGACTCCCGCAGTGCTAACAGTGCCCTGACACCCAGCATCCTACATTCTCAGCCTGTAGTCCAATGGCCTCCTGGTGCCTTGGACTTCACGGTCCCAACACGGCCAGCGTTTGGCCTCTGAAGCCTTGTATTTACTCAAGCCAAGGGCTTGTTCCCTGCTTCCGCTTTCCCACTTGATGGTCAGTCCCCAGCGTCTGTTTCGAGAGCTCCATGTCACTCACTCAGTTTCTGTGAGAATTCTGAGGTACTGTGGAGGTGGGGTGCTGCCCTGCTGAGGTTCCTCGCTTTGGTTACTGTGCTAATGGGTTGAGCGGAGCATTGCGTCTGAGTGACGGGTCGCAGGCTAGGATGGAGGGCTTAGGGCCTGAGGTGTGGGCAGCGTACGCAGAAGCCCTAACAACAGGCCCTGTGGCTAGCCTGCACTACACAGCACAGGATGGAGGCGGGTTGGGGATCCTAGCAGGAGGAGCTTGCTCTAGAAAACCTTGAAGTCTCCCCTGAAATGCTCAAGGAGTCTATGCCCCAAGACCTTGGTCTAAGAGAGGAAGGCTGCATCCCAGGCCCTCTCCTGCCTTGTGATTCCTTCTTTCCCACCTCTCCAACCTCCCCAAGCCCCTGTAACTCCTCCCTCTGGTCTTAGAGTGCCTACTGTTGGAGGTGGGCTTCCTCGGGGTCTCTGGCTGTAGAGGGCTAGCCTGGGACCCAGGTTGAGGTCAGGAGACTGGGCTGGGAACCACCACCATGCGTGTGTGTGTACTCTTTTTTTTTTTTTTTTCTTTTTTTTTCTTTTTTCTTTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCATGTGTACTCTTGTGTGCAGGACTGGTTATAGTTCTCTTTCCCGGGTCCCCTGTGGATGGAGGGGGACTCTTGGGGGGGTTTCCCTTTGTCCTATGCTAGTGGTGGCTGAGCAGGTTGGCGTAGGCTTTAAGTCAGGTTCCTCAGAACTCACTGCCCTGCTTTCTAATCTAGAGCCTTGCCTTCTTATCTAATCTCCTGTGCCAGCTCCAACCTACCCTGCTCGCTGCTTTCCCATGGCTCTACCTGGGTCTCAAAGTCCACCGTGTGCCAAATGGGCCACGTAGGTCCCAGGACGCAGCCTTCCCCTCTTAGACCAAGGTCTTGGGGCATAGACTCCTTGAGCACTTCAGGGGAGACTTAATGGCTTTCTAGAGGTTCCTTGCTTGGGCTCCTCCTGCCAGGATCCCTTACCCCTCCATCCTGCTCTGTGTAGTTCAGGCCTGTGTGTCCCAGTGGATGGCAGGCTACCCACAGGGCCTGTCGTTAGGGTTTCTGTATGGCCGGGGCCTGGTGGGCAGGTGTATAAGATCTGGTACCCTGAGCATTCAGCAGGGTGGGTGAGAGCTCCCCGAGGGTAGATCACACCCAGTACATCATGGATCTCACAGAAGCTTTGTTAGGCCTGACTGTGTGAGGGCCAGCATGTGTCTGACTAGCTGTGGGGCCCGGGTGGCTCCCACCTTTGGGTGAGGCTCTGGAGAGCAGATGAGGGGAACTTGACAGTAAGATGAGACTGCGGGTAGGACTTCGGGCAGAGGGAGCCTTGGAGTTAGTTGGCTTGGGTTCTGATGCTGGGCGTGCACCCATGGCTGTCCACCTAAGGCAGGAGGGGGATGCTACACCCAGAGATGCAGTACCACCGGGTGGGGAGGAGTAGGGCTGCCTCTGTGGGTTTCCACCCACCCTGGGCATCTGGCCCAGACCCAGTATCCTTGCTGTAGCAGCTGAGGTAGGCTGGGGCGGGCGAGGCTGTGCACACCTTCCTTGGTGATAGTGGGCGGTTGGATGCAGGAGGAGTTTCACTTTGCCACTGGGTTGGGTCTGTGGAACCAAGGCCCAGCTGGCAATCTAGGGACACTTTTCTAGGCTGTCACCATAACTCACCTGTCTGGTGTCTTCAGGCCTGCTCTGGACCCCAGTTTCCCGGGCAGCCCATCTGATAAGGTCTTACCCATTACCTGCTGATGGCATCCACCCCCACCCCCTCCTACCTCCTCAGGTCACATAGCATGACCTGGGCTGTTTCAGTCGTAATGCTCAGGAACAGTGGAAGGGAGGCTTGAGAGATGCGTTAGGGTACCCCAAATCCTGTAGACACTCTTTAAGTAAGAGGAGCATGGCTAGAGCGGAGAGACTGCTCAGCAGTGGTAAAGAAGGGAGTATTGCTTTTGTAGAGGACAGAGGAGGAGAACTTAGTTTGCAGCATGAGCACAGAGAGGCTCACAACCCCCTCCAGAGCTTAATGCATCCTATGGGCCCCATGAGCACCTGCACACGGGACATATGCTTACCATACACATGGGTTTATTACTTCTCTCTCCTCTCTCTCCTCTCTCTCCTCTCTCTCCTCTCTCTCCTCTCTCTCCTCTCTCTCCTCTCTCCTCTCTTCTTTCCTCTTCTCTCCTCTCCCCTCCTCTCCTCTCCCCTCCTCTCCTCTCCCCTCCTCTCCTCTCCCCTCCTCCTCCTCCCTTGTCCTCCTCTCCTCCTCCTCTTCCTCCCCTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCGGTTTTTTGAGACAGGGTTTCTCTGTGTTTATCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAAGTCACAGAGATCCACCGCCTCTGCCTCCTGAGTGCTGGGAGCAAAGACGTGCACCACCACTACCTGACATTTTTATTCTTTTTCAGTACTTACTGTCATGTGTACAGATGTTTGCCCTTGTATGTCTTCACTTGCACGCCTGATGCCTGTGGAGGCCAGAAGAGGGCATTGGATACTTTGGGATTGGAGGTACAGATGGTTGTGAGCCACTATGTGGGAGCCGGGAATCAAACCCAGGTCCTCTGGAAGAGCAGCCACTGAGCCATCTCTCCTCTCGAGGGTGGGTTCTTACTCAGGAGCAACCCCGAAGGTCCCCTTTCCCCTTTTCTGTCTCCATGGCCTTGGGGGGCAGCTCCTCCAGGGCCCTGTAGTAGTAGGCTGCAGTTCTCTGGGCTGCTTTTCTCTGCACGTGAGCGGCTCTGGTTCCTCTCTGAGCAGTTTCATGTGACGTCCCTGCTTTGAAGACCCTAGGCTCTGTGTGGGCATGGGTGTCAGAAGCTTACCCAGTGAGGAGGACAGGAACCGATAGAGACCAGGCTGACTCGTGTGGGCTGGACAAACCCATGTGTGTACATGGCCTGTAGGAGTGACCTGGTCTTAGGGGATGCTGGGCAGGGTCCTGGGTTTTACTGAGGAAAGGAACTCCAATCTTTCCTTCCCTCCCTTCCTACAAGGCCTTGTGTACTGGCCAAGAGTAGGCAGTGGGGAATGCTTCTGTATCTTCCTCTGTTCTGTGACTTTCACATTTCCTGAAGGTTCTAGTACCCTTGGCAGGGACTTTTGGAAGCCCTGGTCAGTGTCCCTCCCCTCCCCTTCCCTCCCCTCCCCTCCCCTCCCCCGGCCCAATGGCTGTATCCCCTTCTGGCTTTGCTGAGAGCCTGCCAGCTGGTCCGATTCATGGATGTCTTGCAGGAAATTCTGTGCATTTATCCAAGACCTCAGCGCCCCCGGGTTCTTGCACACTTGGTCTCTGACCTTTCCCGACCTAAATCCAGACGAAACCCACCACCACCGTCCCACCCGATGCGTGCGCAGTATCTTTCTGCTGTTGCCATTCTCAGCGCACGAGGTGTCTTTTCAATGAGGCTTTAACTCCCTGAGTCAGGGACCCTGTCTTTCTGTCTCCTGCTCGTCTCTCCACAGCTGGTAGAACAAATTATTTCACCTGCTCAGTATGCGTTCTGTGCGGCCTGCTCTGCAGGTCCGGGCAAAGCACACACCCCCATCCTTACCGGATCTACACACACGTCTGCCGCTGTAGCGAGCCGGCAGGTCGGAACCAGAACAAAGCAGCCTGCCACAAAGCAGGGCACAGATTATATTGTTTATTTATGGGGTAGCCCTGTATCGTGTAGCCCGGGCTGGCCTTCAACTTCCTATGTAGTGAGGGATAACCTCGAACTCCTGGCCCTCTGCCTCTATTTCCCAAGAAGTGGAATTAGGTGTGTGCCACGAAACCTGGCTAGAGTTCTGGTTTTTTTTGTGTTTTTAAATTTATTTATTCACTTATTATATATAAATACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTAGTGGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTCTGGCTAAAGTTTTAAAAGGAATGGGTCTTCTGTGGGCATGGGTCCTTTGAGCTGAGATTTGCAGGAAGTGAGGGTGCCTGGAAACAGAGGAAGAGGGTCCTAGGACAGGAAGAGGCAGGGAGAAAGTCCCTAGGAGCTTCGAGGATGCTGCAGGAGGCTGTACGGTGGAACCAGAGTGGGCCTGGAGAAAGTCAGAAACACGCATGTTCCTGCGGAGGTGGGCACAGTTTGAGGAAGCTGATTCTCCTACCATGTTTGTCCTGCGCATCCAACCCGGGTGGTCAAGCGTGGTGGCTGACACCTTTGTGCACTGAGCCATCTTGCTTCCTCTTCCCGTTTACGAGACGGTTCTGGGGACTTCTGAGCAGACAGGACCTCTCTGTGTAGCCCTGACTGTCCTGGAACTCATTCTGTAGGCTGGGCTGGTTTCGAACTCAGAGATCTGCCTGCCTCTGCCTCTTGGGAGCTGGGACTTTAAGCACGAGTCACCACGCCTAAACTCCGCTTTGCTTTCCTTTGGGGCCAGTTTGTGATGCTGACGATGGGGCCCAGGACCTCTGTATGCTAATTAGGTGTACCCCAAACCTCGATTTCCCTTGGATCTGTAGGGAACAGGCTAACTGGGGAGGAGGCAGGGGAGAGGCCACGACAAGGCGGTTACTGGTGTTCTGGCCTGGGATGGTGCCAGAAGTGATGAGCGAAGGCTAGATTCTGCTTTCATCATTGTCTGAGGCAGGTTCTCACGTAGCCCAGGCTGACCCAAAATTCACTGCATAGCAGAGGATGACCCAATCCTGATCCCCCTACATCCATGCGTGTGCTGGGATTGCAGACATACACGGCCGTGCCCAGTTGACTCAGTGCCGGGTTGAACCCAGGCATGCTGGGCAAGTTCTCTGCCTACTGAGCTACCCCTCCCCCAGTCCTCTCCACCCACGGAGACAGGGTCTCTTCTCTCCCCCCACCCCGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCCGACAGGGTCTCTTCTTATGGGCTAGCCTTGACCCTGCCCATAAGAAGGGGGAGGAGGGGGCCTGAGGATTAATGTGAAGTTTTAGCCAAAGTGTTTGTAATAGTGGGGTTGTCATGGACTGGGTGGGGACCGCATGAGGACCACTCGGGAAGCCAGCTGTGCTGACACTCCATTAACTTCTGAAGAGCCCATCCTTGGGGTGTAGGAGTTACCTGGGAACATTAGTAGCCCTCTGGGGTTGTTCCAGTGGCCAGGATGACTTGTGACAGGTGTGCAGATGGGGAGGGAGAGAGATCAGGAGGCCGGGAGGTTGAGGAGGGTGTGGCCCCTCCTCCACCTGTCACTGTCCAGGTCTCTGAAGCCCCCTGCTAGCACTCACTGGTCAGCCGGCCTTCGAAGCCCAGCCCTGTGATGTTAACCTTTCCGGGCTCTGGCTACCTGCTTGCAAAATGGAAAACAATAGCAAAGTGGTTTTAGCAAATTAAATAGTGTCTGCAAACATCAGGCAGCCTTCCAGTTCCTCAGGCCACCAGCGGGGTGGCCTACGTCCCAACTGAGCTCCAATGCCATCTGTGTGGAGTTAGTGCTAGACAACAATGACATAGGCCGAGGGCCCTGCCTCCCACCCTGGGTGCCAGTCACCAGCCTCTGGATTTATTGACTGACAGAAGCTGTGGATTCAGGGACCCTGTAACATGAGACACCTGCTACAAACGGCTCACACAACTCAGCAGGACTAACTACTGTGGCCAGTGAGACAGCTTAACTGGTACACACACACATGCACACACACATGCACACACACATGCACACACAGTACATGCGCACACACACATGCACACACACTCACACACACGTACATGCACACACACATGTACACACATACTCACGCACATGCACACAATGCACACACATGCACACACACACGCACACATATACACACATGCATGCACACATACACATGCACACACACTCACATACACATACATGCACGCACACACATACATGCGCGCGCACACACACACACACATACACACACGTGCATTTGTGGTTTGTGGCTGAGCGGTGTTTTGCAGTCATCACCAGGTACAGTGACCACACCTAGAGAGATGAGAAGGCCTAGGGATGCTGGGGTCAACTGGAGGCTTCGCCAGGATCCTGAGGTCACTGAGAGAGTCGGTGGAGGTCACATGTTAAGACCTTGTTAGCCAACGCAAGGAGTGCAGAAGTAGCGTGGGCTTTGATACTTGCTTCGTGAGGCCAGAGAGCCATGTAGGGTTTATATGCAGTCTTCTCCTTGGTGAAATGTCGCCAACGGCTAGTTCTTGGGTTGGGAGGCAGGAATTCAGGAACAGGTGCTGCACAGGGCTGAGCTTAGAGCTGCTCTTGATAGTGGTTCCTCGTCATTGATCCTGGAGACTGGGGTGGAGAGCTTGAAACACGGATGGACGGATGGATAGGTGGATGGACCAATGGATGTGGGTGGATGGATGGGTGGGTTCACGGATGAGTAGATATGTGGATGCAGGGATGGATGCATGGATGGGTAGGTGCAGATATAAAGGATAGATTGATTGATCGATTGATCGATACCTGGGTGGATATATGGGCAGGTGGACACTTGAATGGACGGGGAAGGTGAGGATGGGGGACATGGACAGACGCCCTCCAGGGATTCAGTCCCCAGCCATGACTAGAAGGAATTTCAGACCCTAGCTTGGGTCCTGGTTGAGTCTGGGAAGTATGAGGCTTATTATCCCATCTGTCGGTTTGTCCATCCGTCTGTCAGTCTGTCTGCCTGTAGTCTCTCATCCAATTTGCTGTTCCCTGCCCCGAGGTATGTGAGTCTCTTCCTGGCCTCTAACCCGGCTGCTCTGTCTCCTAG
Seq C2 exon
GCTGGTGGATGACCGTTGTGTGGTGGAGCCTGCAGCTGGGGACCTGGACAACCCCCCCAAGAAGTTCCGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000052795:ENSRNOT00000090925:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF087096=Ins145_P3_rec=PU(11.8=90.0)
A:
NA
C2:
PF087096=Ins145_P3_rec=FE(10.5=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]