RnoINT0077721 @ rn6
Intron Retention
Gene
ENSRNOG00000003841 | Kcnh1
Description
potassium voltage-gated channel subfamily H member 1 [Source:RGD Symbol;Acc:68398]
Coordinates
chr13:111144026-111159973:+
Coord C1 exon
chr13:111144026-111144278
Coord A exon
chr13:111144279-111159776
Coord C2 exon
chr13:111159777-111159973
Length
15498 bp
Sequences
Splice sites
5' ss Seq
TAGGTATGT
5' ss Score
7.76
3' ss Seq
ACAACTCTCTCTCTCCTCAGGGA
3' ss Score
12.16
Exon sequences
Seq C1 exon
GTCCTGCAAATCTGCCCCAAGGACATGCGAGCTGACATTTGCGTACACCTGAACCGAAAAGTGTTCAAAGAACACCCCGCCTTCCGGCTGGCCAGCGATGGTTGCCTGAGGGCCTTGGCCATGGAGTTCCAGACAGTACACTGCGCCCCAGGGGACCTCATCTATCACGCCGGGGAGAGTGTGGACAGCCTCTGCTTCGTGGTCTCGGGCTCCCTGGAGGTGATCCAGGATGATGAGGTGGTGGCCATCCTAG
Seq A exon
GTATGTGCTGCCTACTTTTGATGTACTCCTGCTATCATACTTGGGGTTGTCTTAGTCGCTGGACAGCCACATTTAACCAGAGATTTCCCCTTGTGGGAGGCTCATTTCTCCATCCATTCATCCATCCAACAAACGTTGGAATGCCTACTTTGGACCGATTGATGTTTAAGGCTCTTGGGTTTTCTTCTCTGGGGGCTGCAGGTTATTGGAAGAGATGAATAAACAAGCCACCATTTGGAACATATCAGAAGGGCATCTGACTCAGGATTCAAATGGCAATGCTTCCTATATAAAATGACACACAAGAAGGAGCCAAAAAATTGAAAATGATTTAGCACCAAGCAGGGTAAAAACAGGATTGTAAAAAGAGAGAGGTCAGCCTCTGTGAGAGAGACAGGTGTGATTCACAGGGACAGGTGTGACTCACGGGGGATAAACTCTGAGTCACTTTGTGTGACAGGGGCACATGGAAGGGCCGCCATGGGAGATGACACTGGGAGAGAGTTGATGGACTTAGGCTCCAGGAACCACATTAAAGGATGTTCATTTCCCTTGCAGGGGTGGGGCAGGTGACCCATGGTGAATTGAAAGTAGGGAAGGGGCACCGTTAGGTTTGTACTTTTGAAAAATGACAGCAAGTAGAGGTTGGGCTGCAGTGGACAGGGTAAGCAGGTAAGAGACATGTTATCTAGGTGCTTAACGGACTAGGATGTGGGTGGATGGTGAGAAATGCGTCACTTTGAGGCATGTAAAAAGTCGAATCAAAGGAATCCAATGACGGTTTGCTCTTGGGAAAGGTAGGATCTCTCATTGGATAACAGGGAGACTAACTAGTTCACCACACATGGCAAGAAGGAATGTGGGAAGAGCAGGGATGTGTCGAACGTGGGAGCTTGACCTTCAGTGGTGATGGGGAAACTTCTGAGGCAGCCACAGGGTAGCTCTTCAGTGCACACATCTCTCTAAGAGGACAAGACACCTCAACAAATCACCACTTATGGATCCCTGCTTGTTGCCCAATGTTGTGCAGATGGATCCTCATTTAACCATGCAAAATGGCTTTATTACTCTCGGTCTTTAAGTGAGACAGTTGAAATTCAGAGAGGTAAGGAAATGTCTTCCCAGTGTTTGAGGCCCATGGGGTCCCATCCCAGCAACCTCTGATTCCAGACCTTCTGCTCCCACCAGACTTGTGGAGTCCTGTCCTAGTACCCTCTGTCTTCAGCCTCTCTATGCCTGCCTAGCTTTCAAACCGATGCGCTGATGACTAATGGAATACGTGGGTGCTGGCACTGTTGGTGCCGCTGCAGTTTTCGGACGTAAGTTCGCACATGATTTATTTCCTAGAAACGTGAGATGGATGGGATTACGTTACTGTGATGTTAGAATGAAAAGCCTGACTCTGTAAAGACGAATGGTAGTTTTAAAGCCGATTTGCTCCTGTCTGATTTTGGAGTACCTGAAACATGGCTTCCTTCTTGCTCCTGGGGCACCTTGTCAACTCACCCTTCTGGCTATGTTGTGCTCAGGGTAACCCAAGGGTGATTTATATTCCTTCAGCATTTGCCAGAATATGGTGAGGGGGGCCTGTTAAATCTGGGTTGGAGCTGAAGTGTGTCTTGTCTGCTGGATACCATAGTGCCCATAGAGCCCGACAGCCTAGTCCTGGCTGTTCCTCATTCCCTCCTCTCAGAGAAGTGAGGTTGTGGGCCAAACACAGGAATGGTGAAGACATTGTTGTAGGGTATCTGAAGGAAGGGGTTCTTATCTCTCCCTTTAAATTCACCAATGAGGACATTGGGCTAGCCAGGATTCCTGAGCTAAATGTAACCACTGACCAATCCTTTGAATTTGGACTAGAGGTAAGCCTTCGGAGTCAGGCATCTTGAACCAATTTGCCCACAGATCACTCATTATTTAAGCTTCCAGGAATCCATCCCAAGGCCCAGTATTATCTCTTGTGTTCCCACGATCAGGGATTTTGTAATGCCCTGCCACAGACACCAGCACAATAGACTCAGTATGGAGGGATGATAGCCTGAGGAGAGATGAGGACAAACAACCATTCCTCCCCTCCTCCCCTGTACACCGGGCTTCCTAGGAGGCAGCAACTTCATAACCTGGTTGATTTGGCTGGTTCCACTTCTCCAAATCTAGCCCTCTGGGCATCCAGCCTGCTCCAGTTAGCAGTGTGGTTGGACTTCAAATATAGCTCAACCGCTTTGGACTAAACATGTTGGTTGTTCTCAAGATGCCCAGGCTAGAAAAAGCCTCCTCTATGCTTCCCAAGAGCCAGATTGAGCCCCCAAAGTAGGTCCAGGCTCGATATCCTAAACAGCTTGCCAAGAGTCTCAGTCTATAAAAGGACATGACAAGTTCTTTGAGTCAACCTGTCCTTTAGGCCGTGAGGCATACAACACTCCGAGCTGTTTGTTCCCTGGAAACACCCACTTGGAGCTTTTTAAAAGTCCTTTCTCCTTAGAATAACTTTTGTTCAATGAACTGCAATCAGTTTCTTCTACAAAGGGTTTGAGCATCACACGGGACTGAGAACTAGACCTTCATTGTCCTCCAATGCCCTTTAGTGTATTCTCTCCCAGAACTGTTGAACAGGCCCTGTCATGAGTGGGTTGCTACAGTTAGACCAAATCTTATCCCAGGCCTCAAGAGCTGCATGTGGAGCAACTGACTCTAGAGAGCTGTCACTCTGCACAGCGAGGGTTATATAGGAAATGGAGATGCTCCTGGGGGATTGAAGGATGAGTAGCTTTTGAGCAGTGTTGTGTGCCCAGTGCTCCAGAAACAAAGGGGAACATGCCAGTGTTCGTGCAAGAGGCTATAGAGAAAACAGGGGCACAGCTGCCCGTGCCCTCAGACTCAGATCCCCTGTTATCAGTTCAGTCACTTACAGCCTGCTGATGTGGTTCTTCCTCCAATTAGACCGTACCACCCCGTTCTCTGTTTAGTTTTAGTGCGGACTCCAAGAACAGGAAGGGACAGTATTCATAACTGAGTGGGCTTAGCATGAGCCCAAAATAGAATCCCCCATCACTAAAACCTTATAGACTTTTTCGGGACAACAGCCACGATATAAAATGCTCATTGCATTGCTAACCGATGGATGCAGAAGTAAAACTCAGCAGCATTTGTCCTGTTGTAGGAGATGCAGTCCGATGTTTTCTGTTACGATCGGTTGCCCTTCGTTAGAAATAAAAATGAATATAGTGACCTGGTAAATTGGTTTCTGGGGCTGATCAAAGGTTGCAGTTAGGAAGTGTGTGTGTCTCGAGCCGTGCCAGCCACTCTCTGATTGAAAGCACACTGTCCCCTGAAGACAGTGACCATGGAAGGGCTCTCTTATGATTTCTCCTCTGGCACCCTTGCTATGACATCGTCCTTACTTCCCTCGGAGACGTCTTCCCGCAGTTGCTGAGTTGGAAGGCTACCTTGCCTTTGCTTGGATAAGGTCCTCCTTTGGGCCATCGTTCTAGGTTGGATATTTAGCAGCATCTGCTGTCCACGGTCTTTTCTTTGGGGGACAGAGAAAGCCTTGTCTTCAGGGACCATTGTGCTGAGCTGAGACAGATGCTTAGTGACACGAGCACAAGGGGTCTTGTTCTGTCCCTCTCCTGGAGCAAGCAGGCAGGTAAACGCTCACAGAGGAGGCAGAGCCAAACTGAGAGCTTGGGAGGTGCCAAGGAGTGTGGCAGGCTGAGCATTGGGGTAGAAAAGCATCAGTAGGGTCACTGGAGCAGAGTGTGAGTGTGAGCATGAGTGTAAGCCGCAGGCTGAGGCTAGTGTGAGTGGAGCTGGCCTTGCTGGTTCCATCAGCTCAGAGCTGCCTGCTTCGGTGTGCACCCAGCTCTGCCAACCTGCTGCACTGTGGCGTCAGGAGCACTAAGCCTTGGTTGTCATTTCATGTGTGGTTTGACATCGCCAACCTTAGCTGTGGAGTAGGGAAGGAGGCACATGGAGAAGGAAATGAGGCAGGAACCCATAGGCAGGGGCCTTCCCAGTGATTGACAGAACAGGCTGTGAGGTCTTTGCCTTGGTAGTGGCTGGGAAGATGGAGTCATGAGGTCGGGCATGGGTCAGCTGTGGGGAAGGGACCTGTGTGGTGGATCATGCCGCCTAAACTGGAGCCCAGAGCTGTGGTGACAGTGACAAGATGCAGCAAGGGTGGTGTGGACGGCAGTGTGTCATCATGAGAAGTGGGGCCCTAGCGAGTGAAGCATGGCATCATGAGAGCTGTGCTCCGAAAGCAGTAAAGACTGGGGCCAGAGACATGGAATCTGTGAGGTCACCGTGGGTCATGATAGACAAAGAGCGCTGAGCTACACTCAGAACAAATGGAGAAGGCCCACAAGGAACATTCGAATTACATAGAAACGATGAACGACTGTAAGCATGAATTTCCCCCCAAAGATTGCATCGGATGCAATTTGAGGAAAATTATTCATTGGTTCAGTTTTGACTGGATATCTATATTTTTATTTGCAGAATTTGCCACACTTAGTTGGGAGGTGCAGGTGGGTGAACGGTCAGGGGCAGAGGTGTCCTGGTTAGTTTTCTGTCAGTTTGATTCATCTAGAGTTATCTGGGAAGGGGAACCTCAATTGAGAAAATACCCCCATTAGATCAGCCTGTAGGCAAGTCTACAGGATGTCTTTTTGATGAGTAGTGTGGGCGGGCCCAGCCCGCTGCGGTGAAGCTACCCCTGGGCAGATGGTCTTAGGAAGCAAGAACAAGCCGGTGAGCAATGCTTTTCCCCAGTCTCTGCTTCAGTCCCTGCTTTCTGTGTCCCACCTTGAGTTACTGGCCTGATTTCCCTTGATACTGGGTTGTGATCACATAGAAATGTGAGCAAAATAAATGCTTTCCTCCTCAAGCTGTTTTTGGTCAGTGTTTTATAGAAAACAAGCGAGGACAGAGAGTCTCTTGGGTTGTAAAAGTTAATACTAGAATGCAATGGGGTGAACAGGGAGGCAGAGGCAGGTTCTGCTGTCTGGGAAGTGAGAGAGAAGTATTGACAAAGAGGTGGCCACGGAGCAGAAAGTGTGAAGCTTCCACTAGACTTCCATGTAGAGACCTGAGGACATTGGACAGAGGTGCAGCCAACATTACTTGGAAAGGTGGGTCTGGAACCAGGACAAGAAGACAGGTCGGGACCAGGAAAGGCACTCGGGTCTCTAGCTAGAGATTTAAGAATTAACAGAAGGAATGTAAAACGGGAAAGGGAAAGGAAAACCAGTGGCGAAAGTTTCGAGCCTTTTCCTGAATGACCAAGCATTTGAGAGCATTTTTAAAGAGATGGGGTATAGCCGTTCTGAATGTTCACAGGGAACTTTAAGTGATATTGGAAACTCTAATGGTGAGTGAAATGTTATTTGAGTATGCTGCAACTGATCCCAATTACGTGAAGACAAGCACACGGAGATGAGACTCCATGGGCGTTCTGGCTAGCAAGCTGGGGTAGATGTCCTGTTTGTGAGGCAGGAGGAGATTTTCATTTTCTTATCAAATTTGTCTGACTTTCAGGCTATCTTTAAGAGAACATGTGTGGGTCTCGAGAGATGGTAAAGTACTTGAGTTCAGATCCCAGTGCCCTTATAAAGTGTGTGTGTGTGTGTGTGTGTGCGCGCCTGTGAGTGCGCGAGTGTGGGTCATCTTAATAGGGCAAGAGGCCCAAAAACTCTGCGGACTGAGATGTTCTTTGATGCTAGATGTGGCTTCTAAGCTCTACCAGCGTTGACCCTGAGGATGGTGCTGTGCCTACTTTCCTCTCTCATCTCCTAGCCCAGCCCCAGACAGGACTGGCACTCAGCTCTGACGAAGCCTTTGTCAAGAAGCCTTCCTTTACTCTGTGACTTGGCTGGCTTGGATGCCTGCTGTGTGAATTCTGACAGCATCTTGTTCTTAGCACTATTACCACTCTCCACCCTGCCTTGTAAGTGTATAATGACTTGTCTTCCTGGTGAGCACCTCAGCTTCCTGAGAGACCAGCGTTTTTGTTCATGTTGTGTCTCCAGCCCCTAATACCCACCCTGCATGCTTATAAAATAAACAAACCATTGCAAAGGTGGGTTAGAGGAACTGTGTGTGTGTGTGTGAGAGAGACAAAAGAAGACAGAGAGACAGAGACAGAGAGACAGGGACAGAGAGAGACAGAGAGAGGGGGGAGGGAGACTATGATCCTAGAGGTAAAGGGGCAAGAACTGGAGGGTGCCAAGGCTTGCACCAGTCAGTAGCCTCCAGGTTCACGGAGTAGCTCTGTCTCCAAAATTGAGGGCAATACCAATAAAGGAATACACTAAACATGACCTCTGGTCTCTACATCAAGTGTACACACACACACACACACATACACACACACATTTGTACTCATAGCAAACACACACACACAAACAAATGACCTCTTATCTCTACATCATGCAAACACATGTTTACATACGTATGTATATATACATCAAACACACACAAATAAATAAGCATCTGATATTTTCAAGATGACAGTTAAAACTTTTTTTTTTCAAGACAGTCTTGAGAAAGCTTCATTTGTTTTCCCAGACACTGTTAGGCGATCATTTTTAAGCATGATTTTTTTTTCCCCAAAAGAATGTCTTGGCAGCAGCTCTTTTGCTTGTTACTATCCAATCAGAGAAAATGGCGTGTCTCTGCATGTGTCTACATCTCTCCCCCTGACTGTCCTTGGCCAGACAGTGAGGACCGAAGGCCTTATCTAGCAGAGCCAAGTCTTTCCTAGAGATGTTTCCCGGGGTCCCCGGGAGCCAGGGTGGGAGAAAAGCCGGCTCCAGGACTGCTATTCCTCCCTCTCTGTGGGGCACCCTGCACAGGGAGCAGGTAGACTGCGGGGTGAGCCTGTGTCAGGAGCTGTGCTCCAGGCTCTCCATGCTGTAACCAAGCGTCAGTATTCACCTAGCTGCTCCATCAACCCGAGTGGTCACATTAAATCCACAGTCCTGGTGAGGAGCTGTAATGGGAATCACCTAGAACTGCAAAGCAGGAAACGTTTCTATCGGGTGGCACCAGCCACACCATGCGATCGAGAGAGGATGAGGGTAGACACCAGGTGATCTTTTCTAATTTCTCCTTCTGTTTAAGCAATTTTTGAAATTAGTTTTCAGTCCCCGAAAACAAAGGAAGTTAGATGTACTGTAAGTGAGTTTCTAAATGGAATCCCTGTTACTGCATTGCCCAAAGGACTCAGTTGTAGGAAGTTAATGTCAGTTAGGGCAAGTATGAGATATAGAGGCACTCTAGTATCATGTAAAATGTCTCAAGTATTTTAAGTAAGGAAAGCATAATACAGGACTGCATGTGTGGCAGCCTTAGCTACGTAAAAATGTGTGTGTGCATAGAAGCAGGACGGAAGGCAAACCAAGATCTAGAAAAAGCGTCCTGGATGGTGGCCGTCATTTTCAATATTCAAATGTAGTTGAATAATTTTCTACAATGTACTTCTATTCTTTTACAAATAACCAGAAGGGAAAAACGCAAATGAGGTTTATGCCTGTAGGTATCCTGGTAACTTCCACCATCTCCCGGTGGAGCTCTGGGGTCCGCTTACTTGTGGAGGAGAGGCACAAACAGGGAGTCATCACGGTGGCTCCAAGACCCTGCTTTAACTGAACCCTTTCGTGTGCAAGTCTCGTTCAGGGAGGGGTGCCAGCCTTCTTCACACCCAGTGTCACTGCATGAGGAAGGCTGGGGACATGTGGGGTGAAAGGATCTAGAAGGCTCCTAAGACAGTGCTTCTGTCTCAGGATCATCTCTTGTTGTCCATGTCCCTCATCTCTGCTCCCTGCTCCCACTCACAGGGTAGTTTCTAAAGTACGATGTTTTATTTCATGGTTGTAAATTTTGCCTGTAAACTTTCAGCTTAGCAGAAAGCTGAATCACACTGAGCTAAGGGAGCATCTCTGAGCAGGTCAGCTCAGACACACACACACACACACACACACACACACACACACACACACATGCACACACACACACACACACACACAGTTCCTCTAACCCACCTTTGCAATGGTTTGTTTATTTTATAAGCATGCAGGGTGGGTATTAGGGGCTGGAGACACAACATGAACAAAAACGCTGGTCTCTCAGGAAGCTGAGGTGCTCACCAGGAAGACAAGTCATTATACACTTACAAGGCAGGGTGGAGAGTGGTAATAGTGCTAAGAACAAGATGCTGTCAGAATTCACACAGCAGGCATCCAAGCCAGCCAAGTCACAGAGTAAAGGAAGGCTTCTTGACAAAGGCTTCGTCAGAGCTGAGTGCCAGTCCTGTCTGGGGCTGGGCTAGGAGATGAGAGAGGAAAGTAGGCACAGCACCATCCTCAGGGTCAACACTGGTAGAGCTTAGAAGCCACATCTAGCAACAAAGAACAACTCAGTCCGCAGAGTTCTTGGGCCTTTTGCCCTATTAAGATGAACTTGAATAGAGTAGTAATCGGGGAGCAAGTGGTGACTTTAAACAGAACAGGGGCAGAATTGCATTTGTGCTTAGAAAATCATCCAGGCACCTGTTTGGAAAGTGAATTAGAGAACCAAGGTCAGAGGGGACCAACAAGGAGTACTCCAAGGTGCAAGACTAGCCTGGCCTGATCTCACAGCCGTTTAGATGAGAGAAAATAGAGCCAAGAGATCCTTGGTAGGTGAAGTGAGTGGAGGATGGCCCTTCACTGTTTGTGGAATAAGAGGGGACTGTATTAGGGTGAACGATCCAGGAGGATCATGGGCTTACTGTGGATGAGACTCATTCCTCCTCAGATGGGATTCTGGAGAAGGACCCGGACTCTGGGTACAAACCCTGCATCACTGCAGTCCAGATGCGTGACCAGGCACAAGCTGAGAAAGTCCCTACTCCAGCAGGGGTATGGGGAGGTGAGGAGAGAATCAGGGGTCCATAGTAGGTCCCTAGGAAGCACTTGTACCTAGGAAATGTGTTCAGGAGGCTGGGTGAGAGACTACTAGAACAAGGAGAGTGGCCCAGACACTGGGCTGTTACAGAAGCCAGAGGTGAGGACAGGCACTGGTGCCAAGTTCTTGCAAATGCCATAGAATATTTTTCACTGGACAGAGATGGCACACTTTGTAATATCATCAATATTTTATGACCTGACTGTCCCATTTTTTTAAAAAATTCCAGAGCTGGGCATAGTAGCATATACCTTTAATCTCAGCACTCATGAGGCAGAGGCAGGGGGATCTCTGTGTGCTTGAGGGCAGCCTAATCTATATAGTCAGTTCTAGAAAAAGCCAGCATACATATAGGGGCCCTGTCTCAAAAAAGTAAATAAAATAAAAACAAAACTTAAGGCACATATGGGTGCATTGGAAGCATATGTTATAACACATCGAGGATTAGTGAGCATTTTTCATATTGATTAGCAAAAGGGTAATGATTGACAGGGATGAGATGGGTGGGTGACCTACGGGAGCAAGAAGCTCGACAGGAGGCCAAGGAGATGTCAGGTGCATGGGTTCCAGGGCCTGAGAAACTACATTGGTATGTGCAGAGGTGCACCCAAGAGAGGACAACACAGCAGGTATGCAGAGGTGCACCCAAGAGAGGACAACAGGACAGGTGTGCAGAGGTGCAGCAGCGAGGGGACAACACAGCAGGTGTGCAGAGGTGCACCCAAGAGACAGGCATGAGTGAGTTTCCTCTTCTTTCACAATAAGCTCCTTGACCCCAGAAAGGACTTCCACCATCCCATCCAGCCCCTTAAGATGCTGTAAGGGATCTCTGACCCACAAAGGTAAGTCCAAGTCATTGGTCTGGGTTGAACCATGAGATGCACCCGGCTGTGGGAAGTCAAGCTAAAGGCTCTCTGTGAGAGGCAGAGGCAAAGGCAGAGTGGGTGACTTGGAGAGACCTGGCTGTGACCTTACTTGTGTAGGTTTCACAGAGCACATTAGTGCCCATCTCTAACTAGAGGTAGGTAAAGAGGGTCATCGGGGTGGCTCTTTTGTACCGACTGGAAAGAGAGCAGGTGTGTTGAACTCCTACAGAAGTTACAATCACAGCAAACTTGTAGAGACAGATGCACTCTGGGAAGAGGCGGAAAATCAGATCTGACCCTGGAACCAGGTTACCTGGGCATGTCTAGTCCCAGCACTTTTCCCCCACTGGGTCCAATAAAGCACTCAATACTGCGGCAGCCAAACAAAGCCTGGGTTTTGTTCCCAGGAATGCCTTTTTTTTTTTAAACCTCAAAGAGGAAGCCACTGGTGAAATCTGCAGGGTGTCTATCTGTCTGTCTGTCTCTGATGTATGTTCTCATTCTATAAGCTGTGGCACATGGGACAGAGGCAGTGACCTCTGCAGCAACCTTTATTTGTACAATGAAGGTGAGAGGAGCTTTGCAGTTTTCCTCACAAGACGTCAACCTCCTTATGCCCACCTGCAACCTCAGGCAGTCTTGGGGTTGCAGCCCCAAGTACCTGTGGAGGAGCGCACAAGTGTTCCCGAGTAAGCAGACTGGGCCTTGGCCCTCTGGGAGGAAGCGCCCAGCAGGTGCTGGTGCACACAGTAGGTTCTAGGTGGTCCTAATCTCTGGCCATATGCAGAGTGGGCAGAAAGGCTGGTCAGTGTGGTCTAGCTGAGTCTTTGGCCTTCAGACTGGGAAGCTGTAGCAGGCAAAGAATTGCTTCGGGGCTGCCTGCCCTCAGAGCTTGCTTGCCCTTGGCTTCTCTTCTGGGCCAAGGGATCCCCAGTGGTCTAAGGTATAGGGGCAGCTGCTCTGGTAGGAACTGTAGCTGTCAGAAAGCCAGCAAGGTCAGAGCTCCTCTTCTCATGCAGTTATCCAGGTACACAGGAGCAGGTGGCAACTCCATGGCACCAGATGCCGAGTCTGCTGTCAGCTTGTTCCCCTCAGTAGGGTGTCGCTCCAGCTTTCTGCCAACAGGTTCTTCAGCCCTTCGAGCAGTGCATGAACGGCTGGCTGAGTTCTTTCTGATGGATTTGAGTCTGAAAACGGCTAGCGATTTTAGTAACAGAGGGGCCAGCTTTGGACATGCGCTGTACCACTGTGGGCCATCCTGTGAGCAGTCTTTAAAAGAACATGTCATTAGGAATTACGGAAACAGTCAGACATCTACCCCTGGCCTGTGCCCATTGGCCAGCCAGATTTGTCTATCTGAGTGAACTGGACCTGCTGGATCCGAATCACGATCCCTGCAACCTCTTAACACCGAGGAAGGCTGCTTGATGCTTCCAGGGTCCTATTCCAAACACCTCTTGAATTCACCCTGCAGTTCCCTTGGTGTCCTCCCCACCAGCTCCATTTGCCTCTGCCCTTCACCAAACCAAGCTGCCTGCAGGGTCTCCATTCCTCCCGTGCTGTGATCCTGGGTACTTCAGCCTCTCCTAGCTGTTCTTCAGGTCCCACTGGTGCCCCACCAGGGGGCAGACTCGGAAATGGTGCTGTGTGTAACTGGGGGAGTACATGGGGTGATTCATTAGCACAGTGCTGTTGGCTTGTTCTAATTAGAGGCCTGCAGTCATTCCCACCTACTCCTCTCTCCAAGCTCAGGACATTTACTGAGACCGTGAGAACCTAAGGAGTCACAAGGCAACGAGACCCTTAATGTTCTGTATCAGACACTCTGACTGGTAAATCCAGTTGACTGAACATTTGATTTCCAGGTGCAGTGCGCTGGGTGCCTTCTGTTCTTGAGTGCATGGTCGTGTCCTGCTCATAGCTGGGAGAATGTGTACAGTGTCTGGCTTCTGCCTTTCGATATCTGACTGGGAAAGTCTCTTCCCAGTCATTTGTGTCATACCAACCCATGAGAGCCCTGCTTTGCTCCCTCGGGTTTTCATGAGTTAACGTGTGTCTTGGAACAGCTCCCATTTGGTAGAAGAGTTTGGGGCTTGCTCTGATTCAACGAGTCCTGCATAGCACATGCTTAACCCTCAGATCATCTACGCTGTTCATCTACACCAAAGTGGCTGACTTCACAGGAAGTAGGATTAGACACTTGTTGAACTTGGGCTGGATATGACAACACCAAGGCTCCCAGCCCTATGGAAAACTTCCCGGCACAAGTTGCTGCTGCTGCCTCCGTGCATTGATTCATGTGTGTTCAATCCGTGCATGGGTGTCCTATGATCTGTGCAGTAAATAGATGCACCTCTTGAGGGAGTGCATTAATGAAATCTGTACAACCAGATCCATTCATTAAATGCACACAAGGAGCTATTATTTCACTTTAAGGGTTCTTTTCTTCTATAATTAGAAAATTTAATTAAGGAAGCATAATCTTTCTATATTGGGTCTCGTTTAAATGAGGTAATCTTGGTAAGAAACAGATAAAATTACCAATCAGCTTCTACTCAGTAGTTACAGCTTAATTATACCATGTTTCCTCCAGTAGGAGCTGCGGAGTTTGGAAAGCTGCCTTTCTCACCAATGCTCGAAATGTGTAGCCAGGAAAGCCAATCTGTGAGAGATGCTCCTTGTTTCTCCCTAGTGGGAAATTCCAGCTGTTAGAGAGGTCCTCAGCCTCTCCCGTTACCTTCTTTCAGAAACACAGGGCTCTAACAAGAGCCAGGGTGATGGGTGATGTTCTGTTGAAGGAGTAAGTTCACCCACGAGGCCATTTCTCAGCCCAGAGCTCCGTGAACTGTGTATTCAGGTGTCTGATGCTGGATCACAGCTCCTTACATGTACTGGTTTGAGATACTCATTCTTGTCTCATAGCAGGCTTCTCAGATGGCTGAACACAGGTGGCTTCTAAGCCTGTACTCACCCAGGGCTTGACTGGGCTGGACCAGCCAGAGGCTCATTGTTGAAAGTGGTGGGTGTGCCTGACTATCACATGAGATCTGGACTGGGGACCAGAGCATTCCATGGCTCTCCCCCATGCTGATCAGACTTCAAGACAGAGACTTGCAGGAGTGGGTACTCCACAAGACCCAGGCCATCGGCTTCCCATGACCTTGCCCTAAAAATTCCAGAATGTCATTCCTGCCAGATCGTGTTGATTAAATGACTAAGTCCAGCCTTAACCCATCCCTCGAGAGAGCTTCCCCATGTAACTGTGCTGCCAGACGGAACAGGTAGCATTGGTTTATCAGAAGTTTGCCATGTTCCTTCAGAGGAGGCACATGTGCTAGGAGACCCAGAGCACACAGATATGAAGGACACATGTGTCATGGTGGACAGTGTGGAAAGGCTATAGGATGCTCAGCATGTTTAGGTGAGTTCCCAGAAGTCAGTGCTGTGGGGCATCACAGAGAGAGCTTGTTTCCAGGGCAACCAGGAAGCGGCCTACAGAAAAGCTTCTATCTATTGGGTCTACACCTAGCTCAGCCACCCGTATCACAGACAATTAAAATTAGAACTTGGCAAGGGGATCTGTGCTTACATACAGCACAAAGTAGCTAAACTTACATGTTTGCTTGGAAGTAAGTCCACGGATGTCCTATGTTCACCAATCTCTAAAGTCGCTTTCATTTGAGAACAACAGACACACAGAACCACGAAACAATGTCCCCAGGCCATCCCCAGTTTACCTGATTTGGAGGAGATGGAGATAATGACTCATATTTTGGAGGTGCATAGAGAGAAACATGGAGTATCTTACGTGCTACAATGGACACTTGTTTCTGGAGAAGTCACCAAACCTGTGTGCCTCCAGGTCTAACCATTTCTTTTGCTATTGGCAGGGAGACGGCTCTGGTTGAGCACCAAGGGTACCTGGGTCTGGGGAGCCTGGAATACCGCTCTTGCTTTCTCCTTCCTCTGCATGTTCTTCTCTGGTCCCCTGGGAATTCATATTTGCACTAATCTGCCCCGAAAATGTATAAGCCAGGTGATCAATCAAACCACATAGCTAGAGGCTACTATGCCAGGAATAAATTCAGCTTTGCGATGGACATGGGCTAAAGCATTGATCCTTACGAAAGGTGGGGAGAATGCCTCTGAGTTAGAGGGGGTGGGTGGAAGGTTACTAAATGTCTTATTTGGGGCTGCTATGACAACATGCTGTGGCAGAGCTGCCATACAAGCAGTAGAATTTCCATACGGTTTTAGAAGATCAGAGGTCCAGCATGGTCAAGTTACAATGAGGATCTTCAGATGCAGACTGCCTGCTTCTCCTTGTATGTGCAAATGGAAGAAATAGCATAATTGAACTCTCTGGGGCCCTTTTATGAGGGTGCCGTGGGATCAGACATGAGCATAAGTCACAAACTCTATCTTTGTCAGTCATAGGCCAAAGGCTCCCTCCCAATGCTGTAGGGTTTTGAATATCCACATACAGGTTTGCGATATAAGCCTTTATTTTACAACCTTGTGTCGATTCACTGAATGGACTCGTAAGATTCCAGAAACAGAAGATCCTGGAGATGCAATTGCACAGGACCTATATTGCACACAACTAGGAGGGCATTTAGCAGAGTAAAGAACACATTTCAGGAGGTGTGCGGGAGAAGAAGGACACATGATATAAATTAATCCTTAGAACAGCGAAAAATATGGGAGGGGTTGAACCCCACTGTTGCCTGCTTCTAGGTAGACAGTCTCAGATGCAGCTTCCCTTTTCTTCAGTTCCTGAGATGTCTACACACAAACACACACCGAATCTGTGGAGAATATCTACTCACCTCTCAAACACACAGATGTAGACCTGTGGCTCACTTCAGCCCTCACTTCCTCTTTGCCTACCAGTATCAACCAAGCTCCTACTACTAGTTCTGTTGCCTGACTAGTAAATCTCTATTTCAAAGAAAGAACTGAAGAAAGATCGAAGTAATACCTCCAAATCCCAACTTGCTGAATGAATTTGTTGCAGGTATCATGGGAGTGTGAATGAAGAGTAGTTACATAAACACTTATAGCTCAGAGGCAGATATACCACCTAAGCCCACCCCAACATGGGCAACAACTCATGAACACGACAACCCTGAGCTCTGCGCTTGACTGTCAGAAAGATTGCAGGCTAGAGAGCTCCCTCCTTTTAGCAGTCTTTACTGCTTCTATAACCTGAAAAAGGAGGAACCTTGTGAATCTGATAAGTTTCAGGGAGTTTCTGAGACTTGTGAGTTACTTTAAGGCTTCCTAAGTCTTAAGGAGTTTCCCTCCCAAGATCGAATAGTTCAGATTGTTGTGTAGAAATTCCTACACAACAAATAAGGTGTTGTGCTCTGAGGGGACTAGGGCATACAGCTCTTATGTGCAAAGACACATAAGCCACACAGTAATCACAGGTTATGAGTGGTCTATGGGGAAATGAGGTGTCAACAGACTAATAAGGTGATGGCTTTCTAGGGGACCAGCACCACCCTTGCAGCAAGGTGGCATTAGCACGCATTTGTGCTATCTTAAAGGTTCCTGAGTTGCATGTTATTAGGGTTCAAATTATGACTCCTTTTGTTTTCTCAGAGCACAACCTGAAGGCTACCGGTGACTATAGATTCATCCCAACTATCATTGTGCTCATGACAACTCTCTCTCTCCTCAG
Seq C2 exon
GGAAAGGAGATGTGTTTGGGGATGTTTTCTGGAAGGAGGCTACCCTTGCACAGTCCTGCGCTAATGTCCGGGCCTTGACCTACTGTGACCTGCACGTGATCAAGAGGGATGCCCTGCAGAAAGTGCTAGAATTCTACACAGCCTTCTCCCACTCCTTCTCCCGGAACCTGATTCTCACCTACAATCTGAGGAAGAGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000003841:ENSRNOT00000005209:9
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0002724=cNMP_binding=PU(45.5=47.1)
A:
NA
C2:
PF0002724=cNMP_binding=PD(53.4=71.2)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]