RnoINT0086047 @ rn6
Intron Retention
Gene
ENSRNOG00000016758 | Loxl2
Description
lysyl oxidase-like 2 [Source:RGD Symbol;Acc:1308435]
Coordinates
chr15:51304059-51315476:+
Coord C1 exon
chr15:51304059-51304090
Coord A exon
chr15:51304091-51315376
Coord C2 exon
chr15:51315377-51315476
Length
11286 bp
Sequences
Splice sites
5' ss Seq
ATGATGATC
5' ss Score
-7.44
3' ss Seq
ACACTCCGCGCCCCATCTGGGTT
3' ss Score
0.2
Exon sequences
Seq C1 exon
GCTCCTTCCTACGGCCCAGGCGAAGGTATATG
Seq A exon
ATGATCTTATGTGTGGAGATTGGTTGGCATGTCANCCCTCAAAAGAGTTTTACAGGCTAAAGTTCTACCCACATGAAGATCATTGTTATTGTTGTTGTTGTTGTATCTGTGTGTGTGTGTGAGTGTGTGAGTGTGTGAGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCTCTCTCGAAAGTGCATTTGTGTTCTTGCACTGGTTTGTGTTTACGGCATCCAGAGGGAGATGTTCCTCAGATGTTATTCTACTAGGCCTTTTGCTTCTTTCCTTCTATTTTATTGATTGTTTGATTGAGACAGGGTTTCCCTGTGTAACTAGAACGTTCTCTGTAGCTCAGGTTAGTCATGAACTCAGATCTACCTGCCTCTGTCTCCTGAGTGCTGGAACTAAAGGTGTATGCCAATACCACTTTGTTGTATAATAGACTCTTCAAGAACTGGTATATCCCCATAGTCTATGTCCCTGGTTGGGTGTGCAGGTGTAGGTAAAAGGTAGCATTTGCAAACAGCTGTTCTTCTTGGGCTAGGAGGTGGCTCTGGGTAAAGAGCTTGCTGTGCAAGTGTGAAGACCTTAGTTTGGATATCTGGCACATAAAATCTGGGCATTGTGGCACTGAAGCCTCAGTTCTAAGGACCTGGAGACAGGTGGTTCCCTGGAGCTAACTGGCCAGACACACTAGCCAATTGGCTAGCAGCAGGTTGAATGAGAGACTCTGTCTCAAAAACATAAAGTGGAAGAAGGTACCTGAATCAATCTCTGATGTCTACATGCTTACACACACACACACACACTCACACAATCATACACACATACTCATATACTCATATACACACACTCACACAGACACAGACACACACACACACACACACATTCTCTCTCTTTCTCTCTCCCCAGCTCCTCCTCTCTCTCTCACATACACACACACACACATACATACCCACACAGGAGCTGCACATCGACCCCAGCTGCTCCTCAGCTGAGCTGCCCACAGACCTTGGCATGAATCAGACTGTTGGACTAGAGCTGTCCACACTCCCTTGACCATTGATAACTGCACAAAACTACAGACCATTTCCAACCCAACCGAGAATGTTCTGATCTCAAAGTTCTGGGTGTGACTCGATCTGGGTCAAGGGGACAGTGGATAGACAAGTTAACCCTTCAACCTTTCTTTCAGTTAGTCTAGAAATGATAGGAAGAAGTGTCCCATTTCTTGCACACCTCAGCTCCAATGGGAAGCTTCCTAATGGAAGAACTGGCCTAACACCCCATGCTTAGAGTCACGTGTTCTCAAAACTTGTTCTGGGCTTCTTGGCATCAATGAGAGCCAAAGCAGCCAAGACCAATTAGCCGGGGGCCTTTCAAACCACTTCCCGCATCTGACTGAACTTCCAGTGTTCTTCCGTATGTCCACATCTCTGTTTATTCCATCCAAGAGATCTAGTGCTTAGATCAGATTTATAGTCTCCATTTCAGATTATTGTAGCTTCAAACTTTTATGGTAAATACTCTCCAACAATGGTGTCTTTTACCCAGTGACAGCTTTATTTCTTATAATCAAATCAGCAACAAATCTATCATCAAACGAGGAATTTGTGGATCTTTCCCCATAGGATCCAGCATGGGATGGCAGGATAGGTGGGCTTATTGGGTAGGACTTTGCTATGAAAGGATGACAAGGATCACAGGGTTCAAGAGAGAAGAGGAGACTTGAAAGGAAGCTAATAAAATGACGCTCTGCAGAGTCCGTGCTGCACAAGGGAGACACGAGGAGGAGGAGGAGGGATCAGTCCTGCAAAACTACTTTTAACCAATGAAATGGTGGTAGATACAGCTACAGAACATGATGATTGAGATGGAGATTGAGAAGGGTACAATTATCAACTACAGTCAGGGCTGAGCCGTGAGCTTGAGGAGAAGCTGGAGCCAGGGGTCAGAAGGTCTCTAGAGAGAGAATGTGTGATGACCGAGTACTGAATTTCTAAAGGCCATCCATGTGGACACTGAGGCCATTGAGGGTTATGACAGCTGCAGTCTAGGGAAAGGACAGAGAGAAGCCAATATTAGGCAACCTGAACACTGCAGGGATTTAAGACTTAAGCTGTCTAAGAGATGAGAAGACAGCTACACACATGCAAAATACAATCGTGCATGTGTGAGCACACACACAAAAAGAGGAGGTAGTGACTGAGTATGGTGGGATGTACCTAGAATCCCAGCACTAGGGAGGCAGAGAGACAGGCTTGGAGAGTCTCAAGCCAGGAAGAAAACCTGTCAAAATAAAAAAGTTCAACACCTGAGGAATGACACCTAAGTGGTGTCCTCTGGTCTCCACATGCACATGTACACCCACGCACAAAGTCACATGCACACTCTTGTACACACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCAGCCATCTGTATATAAAGTGGCACCATGGGAGAACTTCCAAATATAAATGTATTTAAGTTTCATCAGCTGCAGTGGAGATTTATTGTCGCACTGGGTACATGGTGTGCACTCAGTACTGAGCTGACTGATGTGCTTTGGTGTGGGAGAACACAGAGAACAGTTGATGAAAGTGGCTGTTGTATGATGACCACAGAGTCTGACCAACTGGGGCTGACCATGGAGTCAGGCTCTGTGGATGGGCTGGGAACAATGTAGCTAACCCAGACACCTCTGAGGTTCAGGCTGTCATGATGAAAATAGGGCGATCGTCAGGGATCCCCTGGATTTTTCAGTCTAACCTGCAAGCAGGTCTCGATTTCCAAAGCCTCTCTGAGCCCAGACAAGCCGGGACCCTTTCAGAGAGCTCTAAATAGGGAAACTGGCCTTTTTCATACCCTCTGATGGGCTTTCACAGTAACCTGAACCAGAGTAGGGCCCCTCTACCCAGTTGTACCAACACTGGCAAGGCCAAGGATCCTGCATGTTCTGACTTGGGATAACTTCCATTCCCTTGATCAGACCAGGGCTGAGCTTCAGAGCAGGTTTATTTATGCTCTTCCAGAGCGTCTTCTAATTTGTTTACTTCTTTCACCAGAGAGGGGCTCCTGTGAGTGAGTGGGAAGAGTAAAACATAGTTTTACTTCTGATTGAATGGCTTTTTGTGTTCCAAATATGAGCCTCCTCCTATGTCCCAAGTACTACTTTCCTAGCATGCGGATGTCCCGTAGGTGCCTAGAACTCTGTCACAGGAAGACATGGAAACAGGGTGTGTTGGACTCAGGGCAATCTAGCGAATGGGCACTAGATATATTGGAGAAAGCATTGACTTGAAACCAGATCAAATAGTGACCCATGAATGGTGATGCTGTCGTGCTGTTGTAAGCAAAGTGTAGGTTTGTATATTCTGTATCTAATAGAAGGCACCATGGTCAAGCACAGCAGAAAGCAAGACTACCAGAAAGGAGCTGGAAAGCAAGGTGTAGCTCTGCTGGATAACAGTGCCCTTGGTACCCCAGGGAGCTGATCCCACACATTCTGCTGTTCCCTGAAGATGCTTTAAAGATGTTCTGAATTTTCATAATAGCCAAGTGATGGAACTAAACGAGATGTCCATCAAAAGATGACTGAAGGCTGAACAGTGTGTGCACACCTTTAACCCCAACACTTGGGAGGAAGAAGCAGCACATAAATTTGAGGCCAACCTGGTCTTTAAGAGTGAGTTCTAAGACAGCCAGGACTACATAGATAGACCCTGTCTTGAAAACAACAGTAACAAAAACAAACAAACAAACAAACAAAAAAGAGATAACTGAATAAGGGAAATGCATATACGTACAATGTAATATTAATCAGCTATCACAAAGACAAAATAAAGTCATTTGGGGGGAAAAGGCTGGAACTGGAGACCATCATATGACATGAAGTAAGTCAGGGCCATCGAGAAAATTACCATGTTTGCTCTCATATATGAAATCTAGACTTTAAAAAGAGGACTTGAACCGGCTGGTGGTGCATACCTTTAATCCCAGCCCTTGGAGATAGAGATAGGTGAATCTCTGCTAGGCTGGTCTATATAGTGAGTTCCAGGACAGTCAGGATCACACAGAGAAACCTGTCTCAAAAAGCAAAATAAAACAAAACCAACAAAGCAACCAAAAAAACCAACAAACCAAAGCAGAGGGGAGACAAGTTAGGAAGAGGAAGGGATCAGTAGAACAATTGGGCAGAAGAATAGTGGGGGTGAATAATATCAAAATGAAACTCTCTCCTTGAGACTGCTAGGTAGCCCCAACTGGCCTCAAATTCATGGCCGATCCTTCTGCTTCTGCCTCCCTAGTGCTGAGATTCCAGGCATGTGCCACCATGCCAGGCTGAAACCCATTATTTTGTGCAATGAATATTCCCTAAGTGGGAAACAGAATGTGGTGGTCCTCCAGGCCAAAGTAAGGGTGGCTTCCTTGGCTACCAATGGAGTAAGGGCATTGCCTCTTTTCACAATCTGCCCTTTAGCTGCTCCCTCAGAATGTCCTGGGGAAGAAGCCTCGCTGGCAAGATGGAGGGGCCCTTCTGTTGCTAGTACGCAGTAAAACAAATAGGAGCTTGCTGTAGAAACAGCCGTCGATTAGCAAGCATGCGTTTTAGTGGAGCCTGACGGCTTGGAAACTAGCCCAGATTGAGAAAGTGGTTGGAAAACCCAGTCCAGATGTTTTCAATCAACTCATTGTTCCCACAGTGAGTCCAAAGCTCACTCCTTTGAGCTGCCACCAGCCAGGCATCAGAGTACACATGTTGTAGCCAGGCTTGCAAGTCAGGAGGACTGGCCCCGTGTCCTCCTTGGCCTCGAAGAACCTCAGCTTCACAGACCAATTTTCTAATCTCCACAATGAGAGTGTCTTGATCACCTCCCCCACCCATTATGGAAACCCTAGAATACATTGGGTTTTTTTACTTGACAAGGAGGAAAAGAAGGCCTAATGTGCCTCTGGGCCTGTTCATCAGCTTGTTGAGTCTTCGTGACAGCCTGTCTGTTGGACATCACTTTGACTTTGGAAATGGGGGCAAAGTTTGTTTCAGTAATTGACAGAGTCACAGATCACCCAAGCCTGCGGCAGATAGGACTCAAGCAGAAGTTTGTAGGTCTGCTGTTCTGGAGGCCTGTAAAAAGACCAATGGAAAAATGACAGGCCTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTCGGTTCGGTTCGGTTTGGTTTGGTTTGGTTTGGTTTTGTAGTGGCTCAGAGGTCAGAGTGATTGCTGTTCAAATATGAGGACCTGAATTTGAATCCCCAGCACCCACATAAACATGAAGGGTGTACTTATATAACACCCATGCATGGGGGAGTGAAGACAGCCCCATCCATGAAGCTGTTGGGCCAGGTTCAGAGAAGCTGAACAGTGACCCTGCTACAAAAAAATAAGGTACAGTTCAAAGGAAGAAGGCATGCTAATGCCAAGCTCTGGCCTCCGCTTGGTACATGCACACACAGGGCAATCTTACACATGTCTATGTAGATATACTACATACACACATATGTACAGACATAGATATGTACACACAAGTACAACATCACTACTGGAAAACCACCTAGCATCTTTCTTAGATCTTCATTTTTCATTGTAGTGAAATATATGTATGAAAACTTACATCTTAACCATTTGAAGTGCATATACAGTTCAGTAACGTTAAGTGTGTTTTTCGTTTTTGTGCAACTAATTTCCAAAACGTTCTTGCAAAACAGAAGATCCAGACGCATTAAATAACCGTCCCATCCTTCTTACAGCCCCTGGCAATTCCCTTTCTGCTCTGTTTCTCAGAGTTTGACAGCTCTAAGTAGGAATCATCCCATATTTGGCCTTTTGTGACCAGCTTTTCCCATTTAGCAGAATGTCCTCAAGGTTGGATGTCGAAGTATGTGTCAGAATTTTTCCTTCTACAGTTTTACCTTATATGTACACAGTTTGTCAAGAGATGCCAGTTATGAATTGTGCTGCTGTGAGCATGTGTGTACAAACATATCTCCCCAAGGCCTGGCTTTTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCCCTCCCTCATCCTTTCCTTCCTTTCTTGTTTTGGGTCCATGTAAATACTAGACAAGCATCCACCCACTGAGCTACACCCACAGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTATGAGACAAGATCTCCCTCTGTAGCCCAGGCTAGTCCAGAATTCACTGTGTAGCTTAATCTAGCCTCAAACTCCTGGCAGTGTTGTCTTAAGTTTTTTGAGTGCTATGATTACAGACATGGGTCTGAGTACACCTGTAATTGTTTTCTTTTAAAATTTGAGACAGGGTCTCACTAAGCTTTCCAGGTTGACCTAGATCTCAATGTGTAGCCTGGTTTGGCCTTCAACTTGTGATCCTTGGTCTCCTTAGAAGATATAATTACAGCTGTATGACACCATACCTGGTTTCAATTTTGGAATTCTGAGTGATATGATAGTGTTAAAGTGAGGACACAGTTTGGTGGTAGAGCAGTTGTCTAGTAAGTACAAGGCCTTGAGTCCTATCCCCAGCAACATTCCCATCTCAACAAACTAAACAAATAAAAAAAAAAACAAAACATGTTTTGAGGAACACTGCACTGTTTCCTGCAGCATCAGCACCTTTGACACACAGGAAATAGCAAATGGTGTTTTTGACAGGAACTCCCTGCAGTACATAGTTTTCTTGTTGCTGTGATCAACTATCTGTCAAGAAACATCCTAAGAGAAGAAGAGTTATATTGGCTCACAGTTTGGGAGCACACAGTCCATCATGTTGGCTCTACATAGCAGGAGTCTACAATCTAAGACTCCTGACACTTGTTCTTGTCTTTGTTATTTGTTCTGGAGACAATATAGCCCTGGCTGCCCTGGAACTTGCTATGTAGACCACACTGGCCTCAAACTTACAAAGATCTGCCTGTCTCTGCCTCCCAAGTGCTGGGATTGAAGGCATGCCACCAATCTACCCTATCCTGTCACATCTTCTTAAACAGAAAGCAGGGAATTGACAGGAAATGTGGTCACACTATAACAGTTAAGGTCCTTCCCCAGTGACTCACTTCCTTCCATCAAGGCTCCACCTCCAAAAGGTTTCCCAACCTTCTAAAGCAGTGCTGCTAGCTGAGGATCAAGCATGACAATGTAGGAGCCTGGAGGGAGGGGAGGGGGAGGGAATCTCACACTCAAGCCACACCACCACCCCTAGGGCTTTGCACATAAAATTTTTCGCTAATGAAAGGAAGGTGAAAGGACCAGAGGTGAGCCACATTCCACAGTGACTTTGCTGAATGTGTAATGATGGCTGTGATGTATTGGCCTGTGAAAGAAAGAATTGAGAAGGAACTAATTAGAGAACTGGCTCATAGGCTTCTGGGCTCATGGATGGCCTGGTGCTCAGAGACTGAGCTATCTGACTCAGGCACTGTGTCTATGAGGAGAGAGCAATAGTGTCACCTAGGTCTCCCTGAGATCAATCTGGTAATGCATGTGGATGTGCCGTAAAACCTGCAAACTCTTGATTACAGAGCAGATGAACTTTTCCCTGAGTGGCTTCTTCTATAGCTGCTCTATGTGCAGAGGCAGATGAGACTGACTTGTGTTGTGGTTATAACTAGAACCCACATTCTTGTCACTGTCTCTATCTTCAAGTCACTTTAGAGTGGCAGTGAACTCTCTAGTCAACCCAGAGCTCTGCAGCTCACAAATCCTTGTCTCCATCTTGCTGATAGGAAAGGGGCTTTGACCTGTGTTTCAAAGGTAGAAGAAACTGAACCTGAATTCAAACCCAGGTTTGGACTGCATCTTGCATGGCATGGACCTCGAAATCTCACTGGGACAGCAAGAAAAAGAAGAAAGGACAGAAGACACACAGACACACATATAGGAAAGCTGGGATTGGGTGGGCTGTGCCAGTTCTGGTGGAGCAGTACCGACTACAGCAATCCATAACATCAGCCTCTGTGCTACATACAGCCCAGAAGTAGGGGTCAGATAGTCTTGGTAGGAGGAGTAGTCAGTGTCATGTTGCAGTCATCTAAGAGAAGCTATAGTCACTAGTATTTGCTCATACTGTCAATATCCACACACAGACCCAAGGAAGGCTCTGCCAGTTCCTCTGAGTCCGAGCCCTTGGTCCTTGTCAGTAATTCACTCAATTCTTCATCTCCTGTGGGGGTTTGCCCTCCCCCCCCCCCCGCCCACATAGGCTCATATATTTAAATGCTTGATTCTCAGTGGAACTGTTTGAGAAGAAATTGGGAAGGATTAGGAGGTGTGGCTTTGTTTGACGAGATGTGTAATGAAGAGCAGGCTTTGAGGTTTCCAGAGCACATGCCACTCCCAGTTAGCTGTCTGTCTCATGGTTGTGTTTCAAGATGTGATCTCTCATCTACTACTCCAATATCTTGGCTGCCTGCCTACTGCCATGCTCTTGACCTAATGGTTATGAACAATAACCCTCTGGATCCATGAGCCCCAAATTAAACACTTTCATTTATAAGTCTCCTTGGTCACGGTGTTTTGTCACAGCAATAGAAGAGTAAGTTAGCTCTTTACACATTCACACAGGGCACCTTTACTTCCCACAAAAGCCCCTGTTCTTCTGTAGTACCATCCGAGTGGTAAAACGTCATTGCCAGATGGGTGAAATGGCTCAGTGTGTACAGGTGCTTGCCATGCAAGGCCATCAGTTAATCCCTGGGACTCACAGAAACCTGGAAGAAAAGATCCAATGCCACAAAACTGCTCTCTGATCTCTACACTTTCTCACTGTGGCATGTGTCCCCCAAACCCCTCCCACACACACATCATGCACACACATACAATAATGATGATACTTTAAATTAAAATTAAACTTGATTGTCAACTTGACATGATTTGAAATCCCCTAGGAGACTCAACTCTGGGCATGCCTATCTAGATGTTTCCACAGAGAATTAACTAAGGAAGGAAAACCCACCCTGAAGTGGGTGGTACTATCTAGGATCCCAAACTAAATAAAAAGGAGAAAAACAAGGAAGCCAGCTAAGCAGCAAAATTCACCTCTCTGCTTCCTGACTGTGGAACGCAGTATAACTAGCCACCTCACTTCCTGATGGCATGCCTTCCCACCATGATCAACTGTATTCCTTTGTAAACTGAACCAAAATAAACCCTTCTTTTAAGTTGCCTCTACCAGGTGTTTATCACAGCATTGAGAAAGGCAACTGATCTACCACATAACCTTCAAGATTAAACATGATTTCTGTCCTAACTGTACTCAAACTACCTCTCCTCTGATCACACCAGCTGCCGGTCCAGGCAAGATATTTTTTGGGACTTGTTTCTTCTATTTTGCCACCATAACATTTTCTCTAGCTAGCAAAGCCTTGGACGCGTCGTTCTCTCCAACACTCGCTTGCTGGATAGTTCTGAGCTTCTAGCTTGACACACAAAGCCACTGAGGAATGTCATCAAAAGCTCATGCTCGCCAGACGACAGAGTCCAGTGCTATGAATAGGGATGTCTGCTCTGAGTGCTCTCTCCAGGGTATAGTTTACATGCTTGACTTTGGGTGCTTTTCTGGCCTAAGGGAACAATAATCTCGTGGTATGCATCAGCTAGGGAAAAGGTAGTCGCAGAAGTTGAATCTTTTCACATGTGGTACCTAGAACCTCCTGTGTGTGGATGGGCACCATGATTAGAGATGTAGCAGCCTACCCTCTTAGGGGCTTCTGGTCTCATTAGAAGCAGAAACACCGTACATGTGGGTGCTGTGTTCTTTGAGATAGAGGTGGGCATGGAGTTCTGGGCCACTGGGGTTGGCAATAAGCCCCATACTCCTCCAGTTCAGTTCCATGGAAAACAAAGTTGGTTACGTGGTATCAGTCCGCTGAATTGCATAGACTTATGGTTGCTCTTGTTACATGACTGAGTGAACATGTTGAAGATGATCACTAGCAAGTGGTCTCCAAGCTCCAGCCGAGGGAAGGATGGGAACTCCATTCCATGCTCCACATAGACTGGACCCAATTCTAGCAATGTGCTGTGTGCTCTGGGGGTTCAGAAGACAGAAAGGCAGGGGCCAGTAGAAAGTCATGAAGATAACCAAGCTGGGCACAGTCTGGGGACATCTGGAGCCCTAAATGGAGGACAATTTTAAGTCTCTTTTCAAAAGCAAATTCAGAAGGCTAAAGAGATGGTTCAGCAGTTAAGAGCACTAGTTACTCTTCTAGAAGACTAGGTCAAGTCCCCAGCAACTACAGTGGCGAGCTCACAACCATCTGTAACCCAGTTCCAGGGTTCCAATGCTCTCTCTGGCCTCCTTGAGCACCGGTGTAGTACACAGACAATATGTACTGGCAAAACATCCATCCCTGTAATGATACTATCCATTCTCCAGAGACCTTCAACTTGCCCATGCATCATATCCAGCTGGTATTGAATCCCCACATATACCCTAGTATGCAACAAGGCAGGCAAGACACAAGGCAGAAGAGAAACATTCAAGTGGAGATGCGTCGATGGCATGTGGAGGCTGAGTATACACGGTTCTGGGTTCCATAGCTACAATAGCGTAAAAAAGAATAAAGCATAGCACTTACCTCTATTTGGTTGATCAATGAATTGTCAAATTTGAAGCCTGGAATTCTTTTTTCACTGCACACGCACCACACCAACATCTTCAGTGTGCTTGCAATCAGTGACACCCCCGCCATTAGAGGAGCAAGCTGCCAGGGTTGACTCTTTGCCTGTGCAGTAGATGTTGTCCAACCAGATGGGCCTGCGGGGAGTGTAGGAGAGGAAGTAAGTATCCTGTCAATGCAAATCAGGTGGCAAGGGCACTAATGCCTTACATGGAATTCCTCTGAATTTGGCAGGGTGTGTAGTTATCAGTTAGTTTTATTGTATGAGGTTGGTCCATCTATCATAGATCACTGGAGGTTCCCTGACTCCGTGATCTATGTAGATGGGACAAACCTCATACAATAAAAACTAATGATAACTACACACGCCTGCCAAAATCAGAGAGGAATTCCATGTAAGGCATTAGTGCCCTTGCCACCTGGATTTGCATTGACAGGATCTACTTCCTCTCCTACACTCCGCGCCCCATCTGG
Seq C2 exon
GTTGGACAACATCTACTGCACAGGCAAAGAGTCAACCCTGGCAGCTTGCTCCTCTAAGGCGTGGGGTGTCACTGATTGCAAGCACACTGAAGATGTTGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000016758:ENSRNOT00000058663:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0053013=SRCR=PU(20.8=90.9)
A:
PF0053013=SRCR=FE(3.3=100)
C2:
PF0053013=SRCR=FE(68.8=100)
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]