RnoINT0112564 @ rn6
Intron Retention
Gene
ENSRNOG00000008129 | Pla2r1
Description
phospholipase A2 receptor 1 [Source:RGD Symbol;Acc:1309777]
Coordinates
chr3:46564612-46576104:-
Coord C1 exon
chr3:46575964-46576104
Coord A exon
chr3:46564807-46575963
Coord C2 exon
chr3:46564612-46564806
Length
11157 bp
Sequences
Splice sites
5' ss Seq
TGCGTAAGT
5' ss Score
9.73
3' ss Seq
CTTTGTGTTGGTTTATAAAGAAA
3' ss Score
3.44
Exon sequences
Seq C1 exon
AGGTCACTGCTGGGCCATTTGTGGAGTATCATTGTGGAACCCTGAAAGTTGCCTCAGCTACCTGGAGAAGCATGGACTGCGAGTCTACCTTGCCTTATATATGCAAACGGCATCTAAACCACACTGCCGAGGACATCCTGC
Seq A exon
GTAAGTGCTCCTTCAGTCGTCCTTTGGTTGTTGGCATGTCCCCTCCACCCCTTAAAATTCCTCTATTCTTGCAAATAATTCATAATTAGGACTTGGAAAACTCAAGTTTATGGCTATATGAATAAAAAATGTTTAAATGACTCCTGCCATCCTAAAGTATCATGACGACCACAAATGCATTCATTCGAAGCCAGAGCACAATGGCGTGAGCCAAATCAACATTTCTGTCCTTTCTGTTTAGAGACTGTCACCCTTCATCATTCCACATTAGAAAACCTAAGTATGCTTTCTTTTATAGTTTTGAGTTTTATTTGTGGGATTTCCTCAAACTCTGTACTTTTTGTTATGTTGATTTTCTTTGTTTTTCTTTTTAACACAATAATTGTACATAATTATGGAGTGCAATGTGCTTTGATCCATATGTGTTGTGCAATGATCAGCGAATCCATCGCTTCAAACATTATCATTTCTTTGCGGGGAGACCGTTCCAACATCTCTCTTAAAGCTATTTCAACCGAACAATGCACTGTTTAGACTCTTGTCACCCGGTATGCAACAGAACTCCAGACCTCTCCTGCAGTATTTCATGTTTCTACCACATTTCAAATTTCATTTTAGTAATGTGCTCTCCCCCACTAAAATAACAAACAAAATTTGGGTTATAATTAAAACAAATAATACCTAGCTATAATCTAGTATAATCTAATCATTTTCACTGGTTGTTATGCATCTGTGTATATGAGTGTGTACTGACATATGTGTTGACAGTGTCCAGTGTATGTATGTTACAAGTTGTATGCATGTGGTGTATGTGCACATGTGTATGGGTGTTCATACCCATGTGAATCTACTGAGGCCAGAGGACTGGAGGCATCCTGCTTTCCCGCTCTCTGCCTCTTTCCCCTGAGACTGGGTCTCTTATTGAACCTGGAGATAGACTGGTGGGCAGAAAGCCTCAACAACCCTCTCTCTGCCGTCCTTTCCCACACGAGGATTATAGGCACATGCCTGACTTTTTACATGGGTTCTGGGGATTTGAACTCGCATACTCCGGCTTGCACAGCAATCATTCTTACCCACTGAGCCATTTCCCCAGCCCTAATTTTATCCATTTCTAATGTCTGTTACCTCATTTAGTGGGAATTGCTATCAAAATAACAGCAAAACCAACTTTTAAAGAATTATTACAAGGAAAATTAGAAACAGCCAATCATAATTTGTAAACATTACCTCTGCCACTTATGTTCTTACTGTTTTTCCCCTCCAATGGCAGCTGACGCCACCAATACTGGAGAACTGGGCATAGTGGGAGAGAGGGGAAAAAATCCAGTCATGGGATTTCTCCATTATTTCAAGTATTTGCTAAAATCGCTTTTGGCTACTATGGAGGTTTACATTCTGTTTTGTTTCTTTCTTCTTTATTTCTCCATTTCTTCTTTTATCCTTCATTTATTTTTTGTTCTCTCTCTCCCTCACTCTCCCTCTCTGCCTCCCTCCCTCTCTCCCTCTCCCACTCCCTCTCCCTCTCTCTCTCTCCCTCTCTCCCTCTCCCTCTCTCTCTCCCTCTCATAATTCGGACGCGCGAGGGAGCGGCTTGATTTTTCGCGGCATAACTTTGGCGCTGTGCGTTGTGATTATTAGGCGGTAGGTAAGCGCGTGATAGTGTGTGTAGAGAAGGAGATCGGTCTGTACCTGACCGATAACTAGAGGAATTAGGTGAATATACGTAGAGTGTGGGTGCTGTGGTCTCGCGCGGGTTGCCTCCCGGCCATTCGTTCGCCGGGTGGAAACAGACCTTTGTCCTTTTACCCTTCTTTTACCCTCTATTGCTGTGGGTATCTCTCCCTCTCCCTTTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTTCCTCTCCCTCTCTCTCTCCCCTGTCACCTGTATTTTTTTCTGTTTGCCTTGCTGGTCACATCAGTGGATCTAGTTAATGAGTTGGTCCGATAATTTACTCCAGTAGGTTCACACTGTGTTTCTGAGCTGCCAGGAATCTTTTTTGCTAAATGACACATTAAAAAAATAATAAAATGTTAATGTGTTCATAGGGTACAGAATCGATGAATATGTGAAAGTACCGATTGTTAATTTCAATCAGGTTAAGTATACCTGTGACCCCAAATGTTAATCTTGAGTGAAAACCTGCGTGCTTGTCTCCAGTTTCTGAATGCTCAACTCATCACTGTCCCCTCATAGTAGCCTCTCCTCACCCCTACTCAGGCTCTCACTCCCATCACTCTCCTCCTCCATCTACAAAATGATGACAAGTTAAAATCATGACGTCACAAATCCAGAAAAAACATCATTACATTCCACATGTGAACGAGAACATGCGGTCTATGTCTCTCTGTGTCTGGCTTAATTTACCTATCATAATGATCTAGGTCCACCCATGATGTCCAAACGTCAGGGTTTTACTCCTAGGACCGGATAATATTTCATCGAATATATTATGCGTGGTGGGTGTAAATACCTCACATCTTTTTATTCATCTGTTTGCTGAGTGACACTTCGGTTGTTTCTGTTCTTGACTGTTGTAAATAATGCTAGATCACTGCTCTAGAGGAGATGGGGCCTGGGAGAATGGACCTGATAAACGAGTGGACTAAAGTCTCAAGCAAAAGCCAATGTATTCAAAGCCTCAGACAATTTATACTCTGAGGGTTAAGAAAGGTCAACCAAGTAATTTCTCATTAGTCAAGCTATATATAATTAATCACAGACACAAGCCACACATGGCAAAAACATGTTTTTCAGTGGAGGCATAGGAAGGATAGTTGACTGAATAATGAACAGCCAATAAGCGATAATGAGTAATCTGAGGTAAACTCATTCCTCTCTGCTACACCCGGGACGGGTACGGAATACTTTCCAGGAGCAATTCCATGTTTTGAAGAAATTGAGGTCACAAGACTTTTGTCTTATTTTCTTGAGGCTTTCTCACAAGCATTCAAAATTCTCCTCACCGTTCTCAGACCATCTTCCGACAACGCTATGATGGGCAGAGAAGGACAGCTGTTCTTTTGAAGTACTAATTTCATTTCATACATAAACATATGTAGAAGCTTTTTAGTTTCACAATACCCATTTGCCTGACATTACTTTTAATTGCTGTGCTTTGGAAACTTCTTGTTCAAAGGAGCCTCGCTCGTTTCAATATCCTGAAGTACTTGCCCTTTTCTTCAAACAGTTCCATAATTTAAGGTCTTTATGTAAGTTATGAACTCATTTTTATTTTTTTATTTTTTTGCAAATGCTGAACATGGTCTATTTTTACTTTTTCATTTATGGGTACCCCGTTTCTCCGGCACTATTTATTGAAAAGACTTCTCTTTGTTCGATCTGTGTTCTTCTAACTCTCACTGAAGATCATTTGCTACAATGCTTGAGCTCACTTCTCAGTTCTTTATCCTGATCCACTGGTCAATGAGCCTGTCTTTACGCCAATTTCATACTCTTTCGAATATTAGAGTTTTGTAGCATGTTCCAGAGTTAAATTTTGTTCTCTTCACCTAGGGTGGTTGTCTTAGTTGGGGTTTCACGGCTGCAAAGGGACAACATGACCAAGGTAACTCTTATAAAGGAAAACACTTAATTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTCCATTATCATTATGGTGGGAACCATGGCAAATGCGTTGGTGGAGGAGCAAAGAGTTCTACATCTTGGTCTGAAGGCAACCAGGAGGAAGCTCTGTCTTCTGTACTGGGTGGAACTTGAGAACCAGGAGACCTCAAGCCTGCCTTCACAGTGACATACTTCCTCCAACAAGGCCACACCTCCTAATAATGCCACTTCCCATGGGCCAAGCATATTCAGACTATCACATTTCACTCCCCGGCCCCCATAGGCTTGTTCAAACACATTTAGTCCAACTTCAAAAGTCCCCATAGTCTATCACAGTCTCAACAATGTTTTAAAGTCCAAAGTTCAAAGACCCTTCCACGATTCATGCAATCTCTTAACTCCAATCCCCTATAAAATCAAAATCAAAAACCAATCCACATACTTCCAACATCACAGGATATACAGTTCCATTCCAAATGTCACAGTGAGGAAATACTGGACCAAAGCAAGACAGAAAAACCAGCTGGGCACACTTGAAAACTGCATCTCCATGTCGGACATCAATGCGTTCTCCAGATCTCCAACTCTTTTCAACTTTGTTGACAGCAACAAACTTCTTCCTCTTGGGCTGGTTCCGCTCCCTGTTATCAGATTTCCTTGGCAAGTGTCCTGCAGCTCAGAACTCACTTCTCTATCTGTAGCACTCTAGACTCTGACTAACTCTGACTAGACTCTGACTGCTGCTGTTATTCTTGGTGGTTACGCCCATGGTACTGTCATCTCCGATCCATTGAGGTCTTCCGCTGCAACTAGGCTTCATCCAAAAGCCTCTTATAGGCTTTCTTGATGGTGTCAAACCTCAATTTCTTTGGATGACCCTTTGAGTACTGACCTGTCAGCTACAGCTGAGGCTACAACCTTCACCGATAGCTTTCTTGGTCTCTCACAGTGCCAAACCTCAGTTACTCTCCATGACCCCATCATGCCTTCAAAACCAGTTCCATCTAGGTGATTCTTACACATTCTTACACAAAAGTCCAGATGCCAACATGATGTCTATATCTGGAACATATCTTCTTTGTGCTCTCAGAAAACACCACAGGAATTCACCCGTGATGCTTGAAACTGCATCTCTATGATGTCAGCCTGCTCTTCAGATCTCCAGCTCTTTTTATCTTTGTTGATGGCAACAAACTTTTTCCTCTTGGGCCAGTTTCACTCCCCACTAGCAGATTTCCTTAGCAGATATCCCGCAGCTGGTCTTTTCTTAACTACCACTAATTTCCTACCTCCATCTAACCAGCATCAATTGTCGCAGTAACCCCTTCTACTCTTGACTCTAAAGCCGGTGGCACATGGCCGAAGTTGCCGAGTTCTGCTGTTCACTGGGGCTGAAATATGGCTCCCTTGATCTATTATATCTTTACCAACTTTTTGTTTTCAGCGGTTTCCTTCACTGCCTAAGCTTGGCTGTCCTGGAACCTGCTCTGTATACTGACCTTGAACTCAAAGATCTTCGTGTCTCCTGAATGCTGGGATTAAAGGCATGTGCCACCATGCCTGGACCAAAGCCTGTCTTTACTTTTCACAAGATCTTTACAAGTTCTATATTGTAGTTCTTTTCAGATATACTCAACTTGACAACTGAGAATAGCCATCAAAACCCATTCCTTGTCCATTTGACACATAATAATATCTCTTTATATCCAAATGAAAACAATAACCAGGTAATAGTAACACCTCGCATAATATAAGCATCTCTTGTTCAACTACAAACAATAAACTTAGCTGGTAGGATCTTGTGCCAAGGTCACCACTGTCTTAATTCCATTCAATATCCTTGAATACATAATTTAGCTCCATTCCTCTTCCTGGTGCCCCTTTACTCTTTAAATCATTCACTTCGTATTTTCCTTTTTAAGCTTGTTATGCTTGATCAGTTTGTTACACTTAATCCAAAATGTTCTTCACAAGAGTGAACCCCAGTACAGAATCTATGATAGGCTTTTTTTGAGATTTCCTTTGCCAGTGCAATTAATCTAAATTTCTTCATTTTAGCGTCAGCAGACTCCTTCATACATATCACAGGAATGATCTCTAGGCAACATACTAAAATTCTTCTCCTCTGAAACCTCTTGAGCCAAGACCCCAAAGTTCAAGTCACCCTCAGCATCCTGTCTTCCATTTTCCTACTAGTTTGGACTGTTAAACCCTGCTTAAAGCATTACACTGCTTTCCAAAGTCCCCAAATCCACATTCCTTCAAACAAAAGCATGGCCATGTCTATCACAGCAATACCAGTCCTTGGTACCAACTTCTGTCTTAGTTAGGGTTTCATTGCTGTAAAAGGACAACATGACCAATGTAACTCTCATAAAGAAAAACGTTTAATCGGAGCTGGCTTACAGTTTCAGAGGTTCAGTCCATTATCATCACGGTGGGAAGCATGGCATCATTCAAGCAGATATGGTGCTGGAGGAGCAAAGAATTCTACATCTTGATCTGAGGGCAGTCAGGAGGAGACTGTCTCCCAAAGGCAGCCAGCAGAAGGGTCTCTCTTCTGTACTGGGCAGAGCTTGAGCATCAGAAGACCCCCAAAGCCCACCCATACAGTGACACACTTCCTCCAACAAGGCCACATCTATTCTTACAAGGCCGTACCTCCTAACAGTGCCACTTTCCATGGGCCAACCATTTTCAAACCACCACAGCAGTTTTTTTTTTTTTAAAGATTTATTTATTATATATAAGTACACTGTAGTTGTCTTCAGACACACTAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCACTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCACCACAGCAGTTTTTAAAGCAATTTATGATTCCAGACAAAAATTAAGCCTTGCCTTTTTTAGTTCTGTGGAAAAATATCATTAGTATTTTGTTAGAAACTGCACTGATATTGCAAATTACTTTGGGTACTGTGAACACTTTGACAATAATGATTTTTTTTTCAATCCATGCATAGTGAATAAATAGCCTTTCAATTTTTATAATCTCCTTGTTTTTTTTTCACTGTTTTATAAACTTCATTACAGAGATCTTTTTCAACTCATTGGTCAAATATATTCCTTGGAATTTTCTACTTTTCAGTTATTGTAAACAGGTTTTATTTCTCTATCAGATAATATACCATCAACAATATAGCGGCAGTCCTGACTGTTTTTGTTATTGTTTTTGTGTTTTTCATGACAGGGTTTGTCTGTGTAATAGCTCTAGCTATCCTGGACCTCACTCTGTCCTCACTCTGTAGACCATTCTGGCCTTGAACCCGCAGAGAACCTCCTACCTCTGCCTCTTGAGTGCTGGGATTAAAGGTGTGAGCTACCACACCAGACCAAACAGTCCTTACTTCTGACGTGTTATAAATAATTCAGTTATATTTCTAATAGATTTCTGTGGGGTTGGTGGTGTCTCTGCATATATATAAGATGATGGCATCTACAAATAATGACAATTTTAAGCACTCTTTTCTGTTTGAATGCTTTTCACTTTTTCTTTTGCCTGATTGCTCTGGTGAGCACTTCAGGAACTGCTGGACAAAAGTAGTGAAGATGGGCTCCCTTGTAACAGAACTCAAGGAGAAAGCTTTCAGCTTTTCTCTGTTCGGTTTACACTATGAAGCATTTTTTTAAAGCAATGAAGGATTTCTGGGTTCAACCCTAATCATCATATATACCAAAAGGCAGAAGCAGGAGGATCAGAGCTTCAGGTCATCCGTGGCAGGAGCTCCAGGCTAGCCTAGACTACATGAGACCCTATATTTAGCAAGACCACCAGTAATAACATTTCATAATACTCCTGAATGTAGAGTAGATGGAGGAAACAGAGAAAGGGAATAAAAACATTGCCCAAAATAGAAAAACTTTCAAGAGCAAAATTTGATGAATATGTGGAAGGAAATAAAAGAAGAAAGCTTGAAAGTACAGGGACGTTTGGAAGAGACAATACTGAAATCACGGGAAAAAGAGAAGCTTCAGGGCCACTGCCTTCTGGCTCCCCAGAAACTGGCCACTGCCAGTTATAAGCATGCAGGGGTTGGGCGGCTGAACCCGAGGACTCTTGCTGTTCTGTCAGTTTTGTTGTTGCTGAAGCTGGATTGGACAAGTATTGTCCGCCCAATTCTCTTCATAATGAGGGTTTTCCTTCTCTGTAATACCAGTGGCCTCTGCTGGCCACACTTACCTTTGTGTTCTAAGACTTGGGTAAATGTTCTCACCCTCCTCAGACTCCTAGTGATATCCCCTGGGGTGGCTGATCTGATGGTTGTCCCCCAGATGCAATGGAGAATGTGGGACACTACCATAGTATTAGGATGAGTACAGGCAGAAAACCCATCTTCATACTCAAGACGTTTTAAGTAATGGCTTAGTTCCTTTTCTACCCCATGACAAAATACCATGAACAAGGCAACTTATACAATAATGCATTGAATTAGGTTTGCAGTCACTGGGTTAGAGCCTCTGATGGCCATGCAAAGATATGGCAGCGGGAGCGGCTGAGAGTTCTTGATCCACAAGTAGGAAGCAGAAAGGGCATACTGAGACCAATAGGAGGCTTTTGAAACTTCAGAGCCTACCCCCAATGACATACCTCCTCCAACAAAGCCACACCTCCTAGTTCTTCCCAAACAGTTCCACCAAGTGGGGACCAAGCATAAATTCTATAGGGGTCATTCTCATTCAAACCACCACAGTGTTAGTGAGCCTGCTGAAGGGATGGTATGGTGGGTATCACACACACACACACACACACACACACACCTTCTGGACTTCAGAATTCTCAGCCTCTACCCTGATGACTCACAGAGGGTGGCTTCAGAACTCAGAGCTGTCAAACTGCAGCTTTCACAAAGGTAGCCCTTAGTCTTACCATCTTACCCAGAAGTGCCAATGTCTTCTTTTCCATCTCTGGTTTTATCTGAACTTCCCCGTCCTCCCCTTAGTCTGGCTAAGGGTTTGTCTATTGCGTTCGGAGAATTGTACCTTATTTCAGTGGCCTTTTGTAATTCATAATCTCCATGTCATTCGTTCCTACTCTGATCTTTATTACTCTTTCCCTCTGCTAATTTGGAGTTTGGTTTGTTCCTATTTTGCTGACTGACCCCTTGAGGTGCAGCAAGGGAATGGGTGTGACGCTGAGTTTCTCAGCCGTTTAGTAGAGGATCACTATATACTGCTGGGTTTGCCTGAGCCCATATGCATTTCACATGTTGTATCTCTATTGGCACCTGTTTCAAAAGAATTTTTAAAATTTCTTCTTTGATTCATTGCCTGTTCAAAAGCAAATCGTTTAATTTCCGTGAGTAAGTATAGCTTCCTCTTTCTCATTTTTGAATTCTGATTTTATTGCATTGTGTTGAAAAAAAAATAGTTGATGTGATTTCAGTTTTTATTGTCAATTTGTCGAGGCTTGTCTTGTGGCCAGGCACATTATCTGTCACGGAGAATAATTAAATTGTAAATTAGGCAGCTGTTGGAATGTAGATGTCCGTAGGGCCCTTTGGCCAGGGGTGCAATTTGACTTTGTGGTTTCCTGGTTAGCTTGCAGTGTGGACAGTCTGGATATCAGTAAATATGAGGTACGGACTCCCAACTACTAATGTGCTGAAGTCTCTCTCTTCCCTTAAGTCTGCCAGTGTTTGCCTTGTGTATATTTTAGAGCCTAATGAGCTTTTCTATCAAGCAGCTGTTTTAGTTCCCGTGGACGCTTTCCCAGACTGATTACTAGCTAGTCCACTTCTAGAACCTTCTTTTGACTACCAGATGCAGGCATGGTTTCCTGAAACCTTCCAATACTTACTTACTGTTATGCAACTGTCAAAGGACTGGTTATCTTACTCCTCCTAATCTAGTTTTGTTTGTGCCAGTCTTTCTAGAAATGCTAATCTGGATGCCTGTTCACTCTGAGCGATTAGTCACCAGATAATGCTCAAGTCCAATTTGCTAAGAACTTGGTTTTGGTACACTGTCACTCTTATTAGGCGGCAATCCAAGTCAGCTTTTACCCAAGGTAGTTAGTATGTTGTTCAAAAAGAACTGAGAGTATCTAGAGAGAGAAGTCTGTCCCCACAAGCCTTTCCCTGGAGCCTGGTACACCCAGAGGCATCACTCATTGCCAGACACTGAGGGATTCTGCCCAGTTCTGAACAGAGCCATCAAAAATCCACCTAAGCCATAGCGATGCCACCAGGCTGTGCTCCAATAGGAAGCTCTGTGCTTGCTTTCCCTCTGCGCCCTAGCAGAGGGCGTCCAGATCTCTGCCTTGGCCTCCTGAAGTTGAAAGGCCAGTATTGCTACAGCCAGCTTCCTGGCCAAATGCAAGACTCAGCCCACAGTTAATAGCTTTGTGGTAGGAGTTGCTCTGCGTGGCACTGGGTTTCACCATGGGAGCCCTGGTGCTGGGTCTCAAATCTAAGACTACACTTAATCCGCTCTTTCTCCCCTAAGTAACAGGAGTCTGTGCTGTGGGACTTGGAGGTGGGGAAGGGATAAAAGACTTGACCAGACCCCTCCCCTTCCTGCTTTCTTCACCACCTTTCCATTTGGTTATTCTAATGAGGGCCTCTGGAGCATCCTGTCTGCTATTCTTAGCTCTTCTGAAGAAGGTCTGGTGGAAATCAAGGGGAAAGTTTTGTTTTTTATTGCTGGAGAGTGGGAATTGAACCACAGCCTGTATGTTAGACCAGCCCTCAACCAGCCCCCAAACAGCGCGTCACTCAGCCTGTCAGGGTTCCACCTGGCAGGCTGTGACACTGCTCCCATCTCAGAAACTCCTCATTTAACTTTTTTCTTACATTGAGAGAGAAGTTTACAAGAGTGTTTTTGTTGTTGTTCATTTGTTTCGCTTAGTTTGATAACCATTAATAATATCCACATGTTCTCACATCCTCTGGGGATGATTCCATTGATGACAGTGTCCGAAAGGTAGTTTTGAAAGAATGGCATCTCAAAAAGTAATGAAATCATACCTAACCAAACGAATAGATACCTGGGACACCTGATCCAGAGCTCGCATCCATCCAGCGTGACATCAGATTCCACAGTGACCTGTAGAATCCTTGAAATACCATTTAAATTATGTTTCATAACAGCCCTTTTATAATCTAAAAACATTTTAAAGTAGGCAGACAGGTTTCATTCTCTTTCTCTCCCTTCCTCCTCCCTCCCCCCTTTATTTTTGTATGTATGTATTTACATATGTATGTATACTGTGTTTGCCTAGTACACCTATGTAGCCCAAAAAAAGTGTTCCAGATCCTCTGGAACTGGAGTTACAGGTGTTTGTAAACCACTGTGTGGGTGCTCAGATTTGATTTTGTGTTTCACTTAGAAAAGTCATCACGATGCTGGCTATGTAAAGGGTATTGAGTAACATTGGAAGTAATTGTGCAAATGCTGTCCTTTGTGTTGGTTTATAAAG
Seq C2 exon
AAAAGGACTCCTGGAAATACCATACCACTCACTGTGACCCTGGCTGGACTCCCTTCAATCGTAAATGCTACAAACTTAAGAAAGAGAAAAGGACTTGGCAGGAGGCTCTGCACTCTTGCCAGTCTGATGACAGCATGTTGATGGATGTCACTTCCCTAGCTGAGGTGGAGTTGCTTGTAAACCTCCTTGGGGATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000008129:ENSRNOT00000011003:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0005916=Lectin_C=PD(33.6=75.0)
A:
NA
C2:
PF0005916=Lectin_C=PU(33.9=56.1)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]