RnoINT0115576 @ rn6
Intron Retention
Gene
ENSRNOG00000016992 | Potec
Description
POTE ankyrin domain family, member C [Source:RGD Symbol;Acc:1308454]
Coordinates
chr17:89634730-89650376:-
Coord C1 exon
chr17:89650315-89650376
Coord A exon
chr17:89634761-89650314
Coord C2 exon
chr17:89634730-89634760
Length
15554 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAGA
5' ss Score
10.57
3' ss Seq
TTGTGACTTTTCTTTGTCAGAAT
3' ss Score
7.04
Exon sequences
Seq C1 exon
GAGGACAATACTTTTGGAGTATGAATATAACCTGATACAAAGATTAAGAGAGAGAAATCAAG
Seq A exon
GTAAGATCTCTTGGCAATTATATTATAGAAATAATGTCAGAGTAAGGAAGTTCTAACTCTAGAAGTTTTCAAAACCAACTATAAGTTGCCTTTATTTTATCTTTCTAGCTTAGAGTTCAGACTTATGAGGAAATTAGTTATATTAAAATTTCAATTTGAAATGGTATTGTTTGAGTAGAAAAGTGGACTAATTTTGGCAGTTAAAATATTATATGTCCTTGTATGTATAAAAAAGATTATCAAAATTAGTATATTATAGTAACCATCACATTGCAGCAAATTGAGTAGGGTATAAAATGAGTTTTAATTCTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCCCTTCCTAGGCAAGTGCTCTGCCACTGAGCCAACTCCCCAACCCCGAGTTTTAATTCTTGATAAGAATATATTCAATCACATAGTTGAGTATCATTTACTTAGTAGTATGTGTCACTAAACATGAATAGTGTTAAAGCATCCTGTTGTTTTCTTTCCTGTTTTGTTAGCCAAAAATCTTGACTTTCTGTGTTTTCAAACTAGACTATAGAACTCATTTACTATTTCTGTGGTTTTGTATAATTTTCATACTCATGGATATACTGTGTTTTTTCAAATATATTCCTATTTTCTTCCACTCTAATTCCTCATGTATAACATCCATAATTTCCCCTTTCCAGTTTCAGGTGTGTCCTTTTCCTCTTTTCAATATCCAATGAGTCCATTTAGTGATGCTGTACATGCATATGTGTGGTGCCATCTACAAGAATGGGTAGCTTCTCAGACCCAACATTCCTGAGGAAAACTGACCCTTCAATCCAAAAGAGGCCATAAATGCCAATAGCTTTTCAGATAGAAGTGGAACCTGCATAGGATCAAGTCTGTGATTTTTAAATGTCTCCACTTTAGGAAATGACTGCCTCTTGTGATAATACACAGAAATACTAGACTGACTAAAAGTATATTACATTAAAACACCATTAATTCTGCCAGTGGACTGAATCCAGAGTCCCATTCTAGGTAAGTACTGTAATCCACTAGCTATTCAAAGAAATTCCATTAATATCAAGAATGAGACAGAGCTGTCTATTATCCCCACACATTTTCAAGTAGTGCTTGAAGAACTAGTAACTATAATACAACAATAAAAAGAAATTAAAGGGATATAAGTAGTAAAAGAAAAAGTTAAATTGTTCCTATGTGAAGATGACATATTATACATAAGAGGTCCCCATAATTCCACCAGAAAGCTTCTAGAAATTATCCACAATTTCAGAAAAGTGGCAGGATACAAAAATCAACTTACAAAAACCAATAGCATTTCTATATGAGAACAACAAAACGTTCTGAGAAAGAAAGCATGGAATCACTCTCACTCACAGTAAACTCAAAAATCTGAAGTATCTACGAATAAACCCAAATAAGAAAGTACAAGACTTTTCCAGTGAAACTTTAAATCTTCGAAGAAAGAGTTTGAGGTAGAAACTAAAAAATGGAAAGCCATCTTATGCTAATGGTTTGTTTGATAGAATTAGTATTGTGAAGTTGACCCTCAACCAAAAATAATATGCAGATTCTATGCAACCCCAATAAAATTCCCATCTCATTCTTTCCAGAAAAAAAACTCTAACATTCATATTGAACCACAAAAGACCCAGACAGCAAAAGTAATCCTGATTCAAGCCTTTTTTCCCCATTTAGGATAATGCTGCCTTTTTCATTAAAGGATAATGTGGGTTTAGGTAGAGTAGAATGGACCAAGTCACATATAAGGGAAAACCAACTAAAATAACAACAGCTGATGTCTCACTGGAAACTTTAATAGCTAGATGAGTCTTGAGAAGTATACTCCAAGATCTAAAAGACCATGGATGCCAACAGATTACTGAACCCAGTCAAAAAATTTGCCACAGTTAAAGGAGAATGAGAAATTTCCCGTGATGAAAACAGACTAAAATAATACATGCCCACCAAATCATCTTTATACAGAAGGTTGGAAACAATATTTCAGACTTAAGAGTGGACATAGCTGTGAGAATATAGAAAATTAAACCGAAATCCCGTTGAGGAGAGGGCTGGACCCTTAGAAGTGCGAACACTCCTGAGAACTCAAAGGAGACTACTCTCTTCCCATATTCCCAAACCAAGAGGAAGTCACCTAGTGCCATCTGTGCCCTTTGAGCACAGGTTACCTAGGAGCAGTCAGGGTCAGGGCCCTTCAGGTTTCTGCCTTCAATAAGAGCTGAGAGCCAGTTGCCAGGAGCACCTACACACTTGAGAGCAGAGCTCCCTGTTCCCATATCCGGCTGAGCAAAAACAGTTCTACAGGAGTGCTGACACACAGGCCTACAGGAGGGTCAAGCCACTGTCAGAGACAGCAAGACTAGCTAACACCAGATACAACCTGATGGCAAGAGGCAAGCAGAGGAAACTAAGCAAAAGAAACCAAGACTGTTTGGCATCATCAGAGCCCAGTTCTCCCAACAAAGCAAATAATGGATATCCAAACATACCAGAAAAGCAAGAATTAGACTTAAAATCACATTTTCTGATGATGATGGAGGACTTTAAGAAGGACATAAATAACCCCTTAAAGAAATACAGGACAACACAAGTGAACAAGTAGAAGCTCTTAGAGAGGAAAAGCAAAACTCCATTAAAGAATTACAGAAAAACATAACCAAACAGGTGAAGGAATTGAACAAAACCATCCAGGATTTTAAAATGGAAATAGAAAAAATAAAGGAATCACAGAAGGAAACAACTCTGGAGATAGAAAACCTAGGAAAGAGATCAGGAGTCATAGATGCAAGCATCACCAACAGAATGTGAGAGATAGAAGAGAGAACTCAGGGGCAGAAGATACCATAGAAAACATCAACACAACCATCAAAGATAATGTAAAACGCAAAAAGCTCCTAGCCCAAAACACCCAGGAAATTCAGGACACAATGAGAAGATCAAACCTATAATTAATAGGTATAGAAGAGAGTGAAGACTCCCAACTTAAATGGCCAGTAAATATCTTCAACGAAATTATAGAAGAAAACTTCCCTAACCTAAAGAAAGAGATGCCCATAAACATACAAGAAGCCTACAGAACACAAAACAGATGGGACCAGAAAAGAAATTTCTCCTGTCACATAACAATTAAAACAACAAAGGCACAGAACAAAGATAACAAACTGAAAGGAGTAAGGGGAAAAGGTCAAGTAATATATAAAGGCAGATCTATCAGAATACATCAGACTTCTCTCCAGAGACTATGAAAGCCAGAATATCCTGGGCAGATGTCATACAGACCCTAAGAGAACACAAATGCCAGTCTAAGCTACTATATCCAGCAAACTCTCAACTACCATAGATAGAAAAACCAAGATATTTCATGACAAAATCAAATTTAGACAATATCGTTCCACTAATCCAGCACTGCAGAACATAATAGAAGGAAAACTCCAACCCAAGGAGGGAAACTAAACCTAAGAAAAGGCAAGAAAGTAATTTCCTTGCAATGAAATCAAAAGAAGAGAGACTCACAAACATAATTCCACCTCTAACAATGAAAATAACAGGAAGCATCAATCACTATTGCTTAATATCTCTGAACATCAATGACTCAATTCCCCAACAAAAAGTCATAGTCTAACTGGATACATAAAGAGGACCCAGCATTTTGCTGCATACAGGGAACACATCTCAGTGACAAAGACAATCACTACCTCAGAATACAAGGCTGGAAAACAACTTTCCAAGCAAGTGGTCTGAAGAAACAAGATGGAGTAGCCATTCTAATATTGAATAAAATAGACATTCAACCAAAGTCATCAAAAAGAATAAGGAATGACACTTCATATTCATCAAAGGAAAAACCAACCAAGATGAACTCTCAATCCTAAATATCTACGCTCCAAATGCAAGGGCACCTACATTCATAAAAGAAACCTTACTAAAGCTCAAATCACCCATTGCACATCACACAATCATAGTAGGAGATTTCAACACCCCACTCTCATCAATGGACAGATCATGGAAACAAATTAAATGGAGGCATAGAGAAACTAAAAGAAGTTGTGTACCAAATGGACTTAACAGATATTTATAGAACATTTCACCCTAAAACAACAGAATATATGTTCTTCTCAGCACCTCATGGCACTTTCTCCAAAACTGACCATATAATTGGTCACAAAATAGGCCTCAACAGATATGAGAAGATAGAAAGAGTCCCATGCAACCTATCAGACCATGGACTAAGGCTGGTCTTCAATAATAAAAAAAAATGACAGAAACCCCACATATATATGAAAGCTAAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAGAAATAAAGAAATTAAAGACTTTTTAGAATTTAATGAAAATGAAGGCACAACATACCTAAACTTATGGGACACAATGAAAGCAGTGCTAAGAGGAAAACTCATAGCTCTGAACGCCTGCAAAAGAAACAGGAGAGAGCATACATTAGCAGCTTGACAGCACACCTAAAAGCTCTAAAAAAGAAAAAGAAACAGATACACCCAAGAGGAGTAGAAGGCAGGAAATAATCAAACTCAGGGCTGAAATCATCCAAGTAGAAGCAAAAAGAACTATACAAAGAATCAACAAAACCAGGAGCTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAACCAGACTAACCAGAGGGTATAAAGGGTGTATCCAAATTAACAAAATCAGAAATGAAAAGGGAGACATACCAACAGAATCTTAGGAAATTAAAAAAATCATCAGATACTACTACAAAGCCTATATTCAACAAAACTGGAAAATCTGGAGGAAATGGAAAATTTTATAGTCAAATACCAGGTACCAAAGTTAAATCAGGAACAGATAAACCATCTAAACAGCCCCATAACTCCTAAAGCAATAGAAGCAGTGATTAATAGTCTCCCAACCAAAAAACAGCCCAGGACCAGATGGGTTTAGTGCAGAATTCTATCAGATCTTTACTGAAGTCCTCAAACCAATACTGTCCAAACTATTCCACAAAATAGAAACAGATTGAGGACTACTAAATTCCTTCTATGAAGCAACAATTATGCTTGTGGCTAAACCACACAAAGACCCAAGAAAGAAACCAACTTCAGACCAATTTCCCTTATGAATATTGACACAAAATTACTCAATAAAATTTTTGCAAACTGAATCCAAGAACCCATGAAAATGATCATCCATCATGATCAAGTAGGCTTCATCCCAGTGATGAAGGCATGGTTCAATTTACAGAAATTCATCAATGTAATCCACTATATAAACAAACTTAAAGAAAAAAACCACATGACCATTTCATTCGATGCTGTGAAAGCATTTGAGAAAATTCAACACCCCTTCATGATAAAAGTCCTGGAAAGATCAGGAATTCAAGTCCCATACCTAAACATAGTAAAAGCCATATACATCAAACCAGTAGCCAGTATTAAATTAAATGGAGAGAAACTTGAATCAATCTCACTAAAATCAGGGATTAGACAAGGCTGTTCACTCTCTCCCTACTTATTCAATATAGTACTCAATGTCCTAGCCAGAGCAATCAGACAACGAAGGGAGGGATACAAATTGGAAAGGAAGAAGTCAAAATATCACTATTTGTAGATGGTATGATAGTATAATTAAGTGACTCCAAAAATTCCACCAGAGAACTAAGAAGCCTGATAAACATCTTTGGCAAAGTGGCTGGGTATAAAAATAACTCAAATCAGTAGCCTTTCTCTACTCAAAGGATAAACAGGCTGAGAAAGAAATTGGTGAAATGACACCCTTCACATTAGTCCCAAATAATATAAAATACCTTGGTGTGACTTTAACCAAGCAAATGAAAGGTTTGTATGACAAGAACTTCAATGCTTTGAAGAAAGAAATTGAAGAAGATCTCAGAAGATGGAAAGACCTCCCATGCTCATGGATTGCCAGAATTAATATAGTAAATATGGCCATTTTTCCAAAAGCAATCTACATATTCAATACAATCTCCATTAAAGTTTCAACTTAATTTTTCATAGAGTCGAAAGAGCAATTTGCAAATTCATTTGGAATAACAAAAACCCAGGATAGCAAAAACTATACTCAACAATAAAAGAACTTCTGGAGGAACCACCAACCCTGACATCAAGCACTATTACAGAAATTCATAGGCAAATGGTCGGAACTGGAAAATATCATCCTGAGTGAGGTAACCCAATCACAGAAAAACACACATGGTATGCACTCATTGATAAGTGGCTATTAGCCCAAATGCTTGAATTACCCTAGATGCCTAGAACAAATGAAACTCAAGACGGATGATCAAAATGTGAATGCTTCACTCCTTCTCTAAAAGGGGAACAAGAATACCCTTGGCAGGGAATAGAGAGGCAAAGATTAAAACAGACACAGAAGGAACACCCATTCAGAGCCTGCCCCACATGTGGCCCATGCATATACAGCCATCCAATTAGACAAGATGGATGAAGCAAAGAAGTGTAGGCCAACAGGAGCCGGATGTAGATCTCCCCCGAGAGACACAGCCAGAATACAGCAAACACAGAGGCGTATGCCAGCAGCAAACCACTGAATTGAGAATAGGACCCCCGTTGAAGGAATCAGAGAAAGAACTGGAAGAGCTTGAAGGGGCTCGAGACCCCATATGTACAACAATGCCAACCAACCAGAGCTTCCAGGGACTAAGCCACTACCTAAAGACTATACATGGACTGACCCTGGACTCTGACCTCATAGGTAGCAATGAATATCCTAGTAAGAGCACCAGTGGAAGGGGAAGCCCTTGGTCCTGCTAAGACTGAACCCCCAGTAAACTAGATTGATGGGGGGGGCGACAAGGGGGGGAGGATGGGGAGGGGAACACCCATAAAGAAGGGGAGGAGGGAGGGGGATGTTTGCCCGGAAACAGGGAAAGGGAATAACACTCGAAATGTATATAAGAAATACTCAAGTTAATTAAAAAAAAGCAGTATTACAGAGCAATAGTTATCAAAACTGTATGGTATTACAGAGACAGGCAGGTAGATCAGTGAAGTAGAATTGAAGACCCAGAAATGAACCCATACACCTATGGTCACTTGATATTTGACAAAGGAGCAAAAATCACCCAATGGTTCTTTTTTAACTGGAGGTCAGCATGTAGAAGAATGCAAATTGATCTATTTTTAATCACCTTGTACAAAGCTTAAGTCCAAGTGGATCAAGGACCTCCACATCAAACCAGATACATTCAAACTAATAGAAGAAAAGGTGGGGAAGAGTCTTGATCACATGAGCACTGCAGAAAATTTCCTGAACAAAATACCAATGGCTTATGCTCTAATTTCAAGAATCAACAAATGGGACCTCATAAAACTGCAAAGGCAAAGGACCCTGTCATTAGAACTAAACAGTAACCAACAGATTGGGAAAAGTTCTTTATCAATACTACATCTGATAGAGTGCTAATATCCAAAGTATAACAGAACTCAAGAAGTTAGACACCAGAGAGCCAAATAATTGTATTAAAAATGGGGTACAGAGCTAAACAAAGAATTCTCAGATGAGGTATATTGAATGGCTGAGAAGCACCAAAAGAAATATTCAACATCCTTAGTCATTAGGGAATTGGAAATCAAAAGAACCCTGAGATTCTACCTCACACAAGTCAGAATGGGTTAGATAAAAAACTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTTTTGGTGGGATTTCAAACTGGTACAATCACTCTGGAAATCAGTCTGGAGGTTCCTGAGAAAATTGGACATTCCACTACCTGAGGACCCAGATATACCTCTTCTGGGCATATACCCAAAAGATGCTTCAACATACAAAAAAGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATATTAGCCAGAAGCTAGAAAGATTCCCAGATGGCCTTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACTCAATGGAGTACTACTCAGCTATCAAAAACAATGACTTCATGAAATTCATAGGCAAATGGATTGAACTAGAAAATATCAACCTGAGTGAGGTAACCCAATCACAGGAAAACACACATGATATACACTCACTGATAAGTGGATATTAGTCCAAAAGCTCGATTTACCCAAGAATCAATCCACAGACCACCTGAAGCTCAAGAAGGATGACCAAAATGTGGATGCTTCACTCCTTCTTAAAAGGGGGAAAATATTCATAGGATGTGATATGGAGGCAAATTTTGGAGCAGAGACTGAAGGAATGGCCATTCAGATCCTGCCCCACATGTGACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCACCAAAACTACATAAGATTGATGAAGCTAAGAAATACATGCTGACAGGAACTGGATATAGATCTCTCCTGAGAGGCACAGTTAGAGCATGTCACATAGAGAGTTGAGTGCTAGCAGCAAACCACTGAACTGAGAACGGGACCGTGTTGGAGGAATTAGAAAAAGGATTAAAAGATCTGAAGGGGCTTGCAAACCTATAAGAACAACAATACTAACCAATCAGAGCTCCCAGGGCCTAAACTACTACCCAAAGACTATACATAGACTGACCCCTGGCTCCAACTGCATATGTAGCAGAGAATAGCCTTGTTGGGTACCAATGCATGTCACATAGAGAGTTGAGTGCTAGCAGCAAACCACTGAACTGAGAACGGGACCGTGTTGGAGGAATTAGAAAAAGGATTAAAAGATCTGAAGGGGCTTGCAAACCTATAAGAACAACAATACTAACCAATCAGAGCTCCCAGGGCCTAAACTACTACCCAAAGACTATACATAGACTGACCCCTGGCTCCAACTGCATATGTAGCAGAGAATAGCCTTGTTGGGTACCAATGAAAGAAGCCCTTGGACCTGCCACTGTTGGACCCCCATTGTTGGGGAATGTTGAGGGACTGGAAGTGGGATGTAGATGGGAGGGGAACACCCTTTTAGTAGAAAGGAAGCGGGCTTACGTCCAGGAAACTGGGAAAGGGAATAACATTTGAAATGTAAATAAGAAAAATCCAATATAAAAAGAAAGAAAATACAATTCATGGAGATTAAAAATTCATCATTGAATAAAGAAAGATTAAGGTAAAAAGACAAATTTAAAAAATAATTTGAAGTAAATGAAAATGAAAACACAGTACAACCAAGCCTCTGGGACACACTGAAAGTATTACTATAAGGGAAATATATAGATGTGGGTGTCTATAGTCAGAAATCAGAAAGAGCACAAATAAGCAACTTAATGGTTCAAGTCTAGAATTTGGAAAACCCAAAAGAAACCAAACTCAGGTTTAGTAGACTCCAAAAAGAAAAAAAAAACCAATTAGGATAGAAATTAATGAAATACAAATGAGGAACAAGTCTGTAGTGGTTTGACTAAGAATGACACACACACCCATGTATGTATATATATATATATATGTATATATATGTATATATGTATATATATTCCATAAATATGCACTTATTTATTAGGACATGGCATTATTTGAGACAGATTAGAAGGATTATGAGGCATGCCTTGTTGGAGGAAGTGTGTCACTGTGGGGTGAACTTTGGGGTATCAAGAGCTCAAACCAGGTGCAGTCTCTCTCATCCTCTGTAGGATTAATGGTAGGGTTCTTTGTCTGCTTTGACATAGTGCTGGGGCTGTTGGAGAGGCTGGACTCAGGAAGTTTGACAGCACTTATCCCAGGCCGCCCCTGGGCGGGAGTCGGGCTGTGGGAAGTCGCAGGACAACACTCCCAAGGTCGGGAAGCATGATCTGAGGCATAGGACACAGTAGGAGCTGGCTTGGGGTCCCCAGGCCTGTAATGACGCCAGGGCCATCGGTTCTCAGGCTCTTGGGCATCCTGGTGCTGCTTCGATGCCTCAGAAGAGCTGACAATGGAGTGGGGGCCCGTGGGCCTGGATCTAGCCTGGGGCCTAGGGAGAAAAGAGGGGGTACGCTCCAGCTGGTCCAGAGGGGAAACTCCTTGGCTGGTAGGCTGCTGTGGTCTTGGACTTGGTGGCAGCTACCTCTGGTAGCGCAGGGGAGGCCTTATGGGGGAGATTAGGCAAAGGGCTCCTCTGTAGGTAAAGGGCTTCTCTATGGCTCCCCATGGTGGATCCCATGAAAAGAGGCAGTTCATGGTTTCCAGGCATTTACCTGGTAAAAAGTGGATGAATAAAGCCGTCTCCACTTTTCAGAGTGGGTCTGAGATTAAATACCTTTTGCAGGGAGGAGTGTCTGGGAAGGGAAGCGTCATTGGCTAAGCCTCCAGGCCTTTAGATACCACATTAAATGGAGATTTTGCCTCGAGCCTAGTGACTGGTGGTCACATCCTCCACCTGTGAAGGGTTTTGGAGCATTGCTCTTGCATGACTGATGGTCACAGACCTATGGAGGGCTGTGGGCCAGTGACCGGCCTGGCTTTCTGGGAGTCAGGTGAATCTCCTGCCATCCCTTCAGGGTCTCTGGGGTTCAAATTTCCTCAATTGGTAACCAGGGTGTCTTTCAGTGTCCTTCAATCCTTTGCCAGGATAGTCATGATTCTATTGCTCCAGGGTCTGTTTGTCTTTTGCCATGTTCCCAGCCATGATGATAATGCACTAAACCTCTGAAACTATAAGCAATTCTCTAATTAAACGCTTCTCTCTGTAAGTGTTTTCTTAGTCAAGGTCTTCACAACATTGAAAAGTGACTAAGACCACAGTTGGTTACAGAGAGCAGTATATTGCTGTGGCAGGTCTGACCAACTGTTTGTTGGAAGAATGTGGACGATTTGGGGATTTTGGATGCTTTATGTGGAGGCCTACTCAGCCATCCTGGTAGGACCATGGACAGCTTTGCTGAGGGCAGTGTGGACTATAGGGTCCATCACAAGATATTCCAGAGGGTAAGAGTGTTAGTAAATGGCCCAGAGACTGTTTCTAGGATAGTTTGGTGGAGAATGTGGCTGTTTTCTGCTATTTTTTAAAAGTTTGCTGGAGGATAACATTTTCAGATTATGATTTTGACAGAGATGTTTTTCATGACAGACTAGCATTGACTGTATCATGCAGTTACTAGGAATCACTGTTATGTGGACCTATAATGAAAAGAAGCAAGCTGGATGGAGAGAAATTCGATGTGTCCAGTTTGAGGAGAAAAGGAGCATCAGGAAGTGTAATGTAGCTAAGTCCAGTCATCGCAGAGATAAAAAGTTTAAAGGAATACAGGATACTAGATTGAAGAAAGATTGGTGACTAGGGCAAGATTTCACTCCCCAACCTCTAATTAAGCTTCCAACTTGTGAAAAGAATTGAAAGAAAAGCTTCAGCAGTGAAGAAAACCATCACCTGCAGAAATCTGATGTAAATGTGATTGATGGATGGGACCAAGTTCCAGTCCCATCAAGCAGCAAACCTTGAACAATTTCAGTCATATGGTTCTGGCTTTAGAATCAAGGCTATAAAAAGGGGATTGTGGGCTAAGGGAAGCTGCAGAAACCAGGCATATGTCAAATGTGTCCCTCGATGGAGTCTCAGCAGGGCCAATGTGTGAGGCTAGAAGGTGAAGCCTAGACTATGTTGGAGACTCCTAGATGCCAAAGGTGCCATAGTCATGGCACACTTGTAGAGGAAAGCTGTGGACTGGGTATGGACTCAGCTCAAGAAAGAGAAGTCTGTTGCAGTTAGAATCTGAAGAGTGTTTTGACATGAGACACGGAGATGCAGAATTTGGTAGCTTCTAGACATCATAATGGGGCCATGAGTGGACAAAATCTAAGCAGTCGTTCTTTGAGAAGATAATTAAAATTGTAAAACTGAAACCTACCTAACCAAAAGGAAGAAAGAGGTGACTCTGTTTAACACAATCAGAAGTGAACAGAGAAATATTACAACAGACATCAAAGAAATTCAAAATATAAGAAAACATCTTTACAACAATATATTCCCTTAAATTGGAAAACCTAAAAGAAAAGTATGCATTTCTCTAAAGGTAAACCAAGAAGAGACAAACAATTTGAAATAGACCCTGTGGTCTGACTGAGAATGTTCCCCACGTATGAATATATTTGAACATAGTCACAAGTTGGTGGTTGTGTTGGAGATGTTTAGGGGATATGACTTGTTGAAGGAAGTATGTTACTGGAGGTGGGTTTTCAGAGCACAGCAGATGGGCCCCATTTCAAGTTTGCTGTTTCTGCTTCACTCTAGTGATTCAAAATAAGCACTCTCAGCTTGTGACTCTAGCCTCCATACCTCCACATTGCCATGCCTCCATGGCATGATGGCCATGGGCCCTTATCTGTCTGGAATTGTAAGTCCTAAAAAACCTTTACTTCTATAAATTGCCTTGGCCATGGTGTTTTATCATAACAATAGTACAGAGCTGTAGCAAACAGAGTATCGAAACAGTAATGAAAGCCTTCCAACTAAAAGAAGCCCAGTACTAGGTAGAGCCTCAGCAGCATTCTACCAGACTTTTCAGAGAGTATTTATGACCAATACTTCTTATTTAAAAAAAAAACTGAACCAAATTAAAGGAGTATTTCCACTCCCGTTTTACAAAGCCAGTATTACTCTAACACCAAACCCATGTAAAGGCACAACAATGATGTATAATCTAATATCTCTGATGAACATAGGTGAAAAGACCCTTAATAAAACACTTGAAATACAAATACAGGTATAAAGCAAAAAGATTATCCAACATTGGATTTGTCCAGAAGATATAGGGTTAGTTCAAAGTACTTAAGTCAACAAACACAATAAACTCTATAAATCGCCTTATGGACAAAAATTACATAATAATTTCAAAAGGTCCCAAAAAGGCCTGTGGGAAAAATCCAACACGGCTTCATGATAAAATTTCTAGAATGGGACTGCAGGCAATGTAACTTAGAAGGTGTACTTTTAAAATTGGCCTCCATAACTTTATTGTATGAACCTTGTTCTATAAAAACATTAGAGTGTGAATACCCTGGATGAAGCTACAAGACAATTTTCTTCTCATGGACAAGTACAAACAAGTGTTCACAAGGCTGATTTAAGTTCCCACTATTAGTTTGTGATGCTGAACAGTAAATATTAAACTCAAGACCTTCCAAATATTAAGCAAGTGCTCACATACTAATTTCCAACCCCGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATTTGAGCTTTACAAGGAGTGAAAAAAATCACATCTAATGTTTCCCTGGGATAGTCAAGTGTGGGCACAATCTGAAAAATTGAGAGGTTTAATTAGTTGGTATATGTGATTTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAACAGCAGTCAGCGCTCTTAACCACGGAGCCATCTCTCCAGCCCTTAATTAGTTGGTATATCTGTAATTTCTTTCTTTTTTTTTTAAATTATTTATTCGCTTATGTTATGAGTACACTATTGCTGTCCTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTCGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTGGGAAGAGCAGTCAGTGCTCCTAACCGCTGAGCCATCTCTCCAGCCTGGTATATCTGTAATTTCATATCTGATTATCCGTGTCCTTCATTGTTGGTAATCGCCCCGGGCTCATTTTTTTAATACTTGTTTGTAAGTTTTCCTTTACTATTAGCTATGATTTGGGGTCAGATATACTCTTAAAATTTTTTTAAACTCATTCATTTTTATTTTATGTGTTTTGGTTTTGGCTAAATGCACCATGTGTACGCAGTTCTTACAGATGCCAGAAGAGGGCATTAGGTCCCCAGAAATTGGCTTTATAGACTGGCGTGAGCTGCCTTGTGCATTCTGGGAATTGAACCTGAGTCTTCTGGAAGGGCATCCAGTGCTCTGAGGCATATCTCTAGTCCCAAACAGACTCTTAAAGGTTCAGTCACTCCAGTAGTTCCAGCAGTTCCTTCTATGAGAGACAAAATATCCAGTAGCATTCAATCGTATTTTCACCAAATGGAAGAATGAGATAATAGTGAGAATTGAGTGATGCTCATTTTGAGGAGGACTGAGGACTAGAAAGATGCAGCAACAAATTTCTTCTCCACTGGCAGCCAGAAAAGTGTTTTGATGATGTCTTAGTTAGGGTTTGTATTGCTGTGAAAGACACTGTGACCATGGCAACTCAAAAAGAAAGCATTTAATTGGGGCTGGCTTGCAGTTCAGAGGTCTAGTTCATTATCATCAGGGTGGGAAGCATGGCAGCGTGCAGGCACACATGGGGCTGGAGGAGGAGCTGAGAGTCCCACATGTTGATCCACAGGCAGCAGAGGCAGAACTCACTTGAGCATGAGACCTCAGAGGCCATTCCCACAGTGACTTCCTCTAGCATCTACACCTGCCCCAGCTCCCAATAGTGCCCCTTCATCTGGGCCTGTGAACCATTTTTATTTAAACCATCTCAGATGGGCCCTTGTCCCTGGTCTCTTTCTGTGTTTTGCTGAACTGTGCAGTATAATGAACAGACGGTGGGCTTTCTTGTTATATCATTTTACCTTCAACTAAATAGTTTGCGTGAATTTCTGAAGAGGTTCAGTTGTGTCAAGAGAAAAGCAGATTTCTTTTTAGAATTTTTCCTTGGGTAATTACTTCAAAAATTAAGGTATTTGCACGACACTGTTGGTTTCTGGAAAGAAACTTATTCTGCTAATGTCAACATGCTCTGACAGTCTGCCATAGGGTTACCATGCTCTGACACTGCTGTGATGTCACCATGCTCTGACACTCTGCTATGATGTCACCATGCTCTGACAGTCTGCCATAGTGTCACCATGCTCTGACAGTCTGCTGTGATGTCACCATGCTCTGACACTCTGCTGTGATGGCACCATGCTCTGACACTCTGCTGTGATGTCACCATGCTCTGACAGTCTGCTGTGATGTCACCATGCTCTGACAGTCTGCTGTGATGTCACCATGCTCTGACAGTCTGCTGTGATGTCACCATGCCCTGACAGTCTGCTGTGATGTCCCATGCCCTGACACTCTGCTGTGATGTCCCATGCCCTGACACTCTGCTGTGATGTCACCATGCCCTGACACTCTGCTGTGATGTCACCATGCCCTGACACTCCCTTGTGCTCAGATAGGATTGTGGTTGTGATACATGACAATCTTGTACAAGGCATCACATTTTGACATATTTCATTTTTCTTCTATACAATAATGACAAGGAGAAATAACTTTTAATATATCACTTACTCTCAATTAGTAATTCATACTGACAGTAGTATATTTCATATTGATGGTAGAATATTCTCATACTTAATACTGCACTTTTAAAACTTAACAATATTTTATCTACACAAGGTAACTTGTGACTTTTCTTTGTCAG
Seq C2 exon
AATTTCAGAGTTCTGAAGACTCTTCAATCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000016992:ENSRNOT00000052342:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.455
Domain overlap (PFAM):
C1:
PF127962=Ank_2=PD(16.3=68.2)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]