RnoINT0130704 @ rn6
Intron Retention
Gene
ENSRNOG00000006916 | Sardh
Description
sarcosine dehydrogenase [Source:RGD Symbol;Acc:621125]
Coordinates
chr3:5746047-5760962:-
Coord C1 exon
chr3:5760869-5760962
Coord A exon
chr3:5746210-5760868
Coord C2 exon
chr3:5746047-5746209
Length
14659 bp
Sequences
Splice sites
5' ss Seq
CTGGTAGGT
5' ss Score
8.37
3' ss Seq
CCACACGCTTGTCTCCCCAGGTC
3' ss Score
10.19
Exon sequences
Seq C1 exon
CCGTGACATTCTCCAGGATGTGCTTGATGCTGACCTGAGCAATGAAGCCTTCCCCTTCTCCACCCACCAGCTGGTGAGAGCTGCTGGACACCTG
Seq A exon
GTAGGTGGCAATGGCCTCTGGGGTGGGGAGTGTGATGGCAGCAACTTTGGGCAATGGTAGAGTGGGCCTGGGAGTCTGGTACCTTCGGGCAAGTCTCTTTATCTCCCTGGGCCTCGACTCCCAATTCCAGTCAGCCAACCTGACCCTGGAGGGAGCTCAGAGAAGCATGGTGGGGTCAAGATGGGGTCATGTGTCTTCTCCTTGGTGCCTGGCCTGTGCCAGTCTCATCTGGGGAGAGGCTTCGCTGCTTAACAGATAGATGCCTTTGTGCCCTCTCCTCAAAGTGGTAGAGGATGTCCGTCTAAGCCAGACTACTGCTTTTCTGCTTCCCCACAAACAACAGGGCTGGGGAGAGCTGACAGTTCTCTGCAGGTTCCCACATCCCCAGAGGAGGCTACTTCTCCTTCCTTGCGATATCGTCCTGACAATATCGTCCTGGTGTTGTAGATGTGGGGGAGCCTGGTCAGCCCCCAATTTCACCTCTACTGTAGAATTTAGAAGTCCAATGCTAAGTGATGAAGCCCGACTCTTTCGAGGTTATGGTTAGCATCCTCATCAGGGTCTCCTGAACTCCAGGGGCTTTCTAGAAACCCTGGGTAGGGAATCTGGGCCCTAGCCCCTGACTGGCTCCTCCATTTCCTGGACCTCAGTCTCCAGGTTGGAAAATGCACATTGTAGTTTCCTCTGGGATTCTCAAGGCTGAGGGAGAGGTTGATGGTGACAGACACCAAGTATCATCTTCTCTCCCATGGGAGATTAGAGACTCTGACCTCTGCTCATAGATACTGCAGTACCCCATAGCGGTGACTACGGGAAGTATTTTCTGACGAGGCTGGCTTGCCCACTAAGGCCATCCCGGATCATTCATTTCCTGCAGCTTTTGCAGGGCCCCCAGCCCGTGCTGCATGAGGAATTCTTCCCTAAACTGAATTTAGAGAATCTGGATGTCTTTCCCATGCTGCCCAAATGACAATGTCCCCCAAAACAAAGATCTGGTGACACACATGCCTGCAGGAGGGCAAGGACACTGTCGGGCATGTCCTGTCCTCTCTACTTGGCCATCTCTAGGCTTTTACGGAGAGATGGGGAGGAACACCAGTTGGAGAATGAGATCCCTGCCCGCAGAGGGGCCAGACACTCTGGGACCAGGCTGGAACCTGTCAGCAAGTAGACTGAGTGGCGCTGAGTGCTAGGGAGAATGCTGCCAGAGAGGATGGGTGATAAAGGCCGCCACGTGGTCTGCACTCCACCTCCCCTCTGGAAGCTGCACCAGGGTTCAGGAAGTGGGGTGGGGGTTCTCTGTCTAGCTTGTTTCCTGCCTCACGAGTACAGAGCTGCTTGCTGACACCAGAGAGGGTGGGCGCTCTGAAAGAGTACTATGGTGGGATCCTGGGATACGGCAGCCCCTGGACCTTCAGACGCTAGCTTGGGTTGTTCACGAGGGCATCCTGGTGCCACTTGTTTTGGCATAGTCAACATCCAGAGTCTGGTTTTGGTCCGGGCTGGGTCCTGCTGTGTGGAGGAAGGAAAGCCGTGTCTCTTCCACTGTGTTGAGGCTTGGCATAGCCTCAGTCTGTGTGTGGTTTGGATGTTCATGGAGGGAAGACCAGGTGGGAATATATCCCCTCCTGTCAAGATCAGCATCCTCCCACCACGAGCAGGACTGCCGTGGGCTGGGGGGAGCGGCGTGGGGTTCCCAACTCCAGCTGCTCCCTCCCATGGGGCCCTGTACTGGCCATGTCTGCCTCCTCAGCCCTCCCAGGCTGCCTGGGAATCTTCACCTGGGGCCTGGGAGCTAGGCCAGGGCCCAGGCTGAGCTGACACAGTGCACACTGCCCAGGGTCATGGGCAGGCCAAGCCCCAAAAAAGGTGTCTGGTTCGGGGAGGATGTATTCACTGGCTACTTGTGTCTCCTGCCAGGCTGACTTATGGTGACATAAGCTACATATGGAATTATAGCCTGGCTCAGAGCATAAGCCTGTCATCCCAGCTATGCAGGAGACCAAGGCAGAAGAACTGAAAGTTCAAGGCCAGCCTGGTCAACTTAGTAAGATTCTGATTTAAAATAACCAGTAAAAAGAGAGCCGGCTAGAGCTCAGTGGTACAGTGCTTGTCTAGCATATGTGAAAGCCTGGATTCAACCCCCAATACTGTAAAAAACAAACAGGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGCAAACACCATCATTCTGTTTCCAACCATAGCCGCACAGCGAAGGCTGGGTACCGAGCCCAAACCAGACCTCCCTTCTGCAGCACAACCTTGACCTCACTGGGCCTTGCTTCTCTCAGCCCTGGAATAGGGTCATGGTCCAGCACCCATGGCATGATTACATAAAGATGGCCTTCTCCATGTGGCAAAGACACACTGACCAGCTCATGTCGCCAACTCTTGGCTGTGTTGTAAAACATGAGAAAATTCAAGAAAGCTCATCTATCCATCCCTAGAGGCTGGCGTGTCTACTCCATGACAACGTCTGCCTGTTTGTAAGCATGGTGGCCGTGGTCCCCACATTGCTTTGTTCTCTGGTGGTGCTACAGTCCTTGCTTGTTCATTGCAACGTACAAGAACTTGTGCCCACCCCCTGCCTTAATACTACCCATGTTCAAACATCCTGGGGTCCATTTCTTCTCTTGGAAGCAGCCTAGTGGCAGATGTCCTTATACACGGAGCTATGAGTTTTCTGTCCTAAGAAAGGAACCGATAACTGAACCCACTGAGTCAGAGGCAGCCTGCCCTACCCACTTATTCTGGACCCCATCCCTTTCCAGTGCTGTCCTAGATCTGACAGGATAGGAGAAGACATTGCTTTCAAGACCAGGGTTCTTGTCTTGGGGAGACTGGTTGTGTGGTGAGCTGGGAAACCTAGAACCCTGCAGATCCTTGAGGATAGCATACCTAGGGATACATGGTACATGAGAGAGCATTCAACATGGGAAGACTCCAGGTTCTATTTCAACTAGCTGGTCACAATGAGGCAATTAGATGGATGGGCCCATGTTTGAGGCCAGACATGGGCAATGCCTCAGCAAAGCTGACCCATGGCAGTTATTGCTAATGCACCTCCTGGTACCAAGTACACACGGCACCATTGTGGACCATCGGAGAGTTCGAGCGTTTGGGTCTGAACCCATGCTGCTTTCCTATTATACAGCTGCCCTGCCCCCCAGCAGCCCCTCCCCTGGCTCTCGAATGAATTCCAGATGTGTTGGCGAGGAGCACCTGTGGGACTGGGCCAACCCTAGTGATGAAGAGGAAGGTGTAGCCCGCTCTCTGTGTGTGCATCCCCGCCCATAGGCTCAAGGGAGCTTGCAGCTGCAGTCCAGAGCAGTGGAGAGTGGCTGCCACTGCCCAGGAGATGACAGCCTGAGAGTCCCTGGAAATGCTCAGGGAGAACTGGGTCTTTGTAAGATAACTTTGACATGGAGATGCTAGTGTCTTGTTGTTGCCCAACTGTCAGCAACCATGAGCTTGGGCCTGGTTCCTCAAGAAGGTGAGCCAGCTTCACTGGTGGCTCACTATAACATAACGAGAGAAGTCTGCCGTGGTGTGTGCTTCAGTCTCCACCCAGAAACATTTGACGCCTGTCTCTGACGCCAGTCATTCTCTCGCGTCCTACTTCCTCAGAGGTCAAGGCCGTTCAGATTGGGAGGATCTCTGAGGACTGGGCTTGCCAGGTAATTGATGAACAGAGCTGGGACATGCAGGCTAGAGTAGGAGTATCTGACAGGCTGCAGCTAAGGTTATGTAAGACCGTGCCCTGCCAGGGTCCTGTCCCAGTGACCCCACCTTCTCCCAAGGGCCTGAAAGAGGGTTAGGCCAAAGAGAACAAGATTGTTCCTGTCACATCCATGCTGTGGTTTGCGCTGACCTGGAAAGTTGTCTCTCAGTGTGGCTCTGGACACACATCCCAGTGGCTTATTCCTTTCCATCCCTTGGCCAACAGTAAGTGGCAGTTTAACCTTTGGTGACTCCTCAAGCTATAGAAGCTGGCTGGCCACTGTCCTGGCCCCAGAGGTGGGGCTAACAGGAGAGTGGAGGAGGGAACAGGGAGCTGGGCCACAGACATGAAGGGGTAGCGTAGACCAACACTTCTGTGCTACCTTGACCCTCAGAACTAGGAGGTAGATGTTGGTCTTCAGTCTTACGCCAGCCTTCTTAGGCCTCAGTTTCCCTGGCAGTAGTGGTACAAGTCTAGACAATCTCAAAAGTGCTTTGTGGTGCATCCTGTATATCTGTTCAAATACTGAATCCTCTTGGAATCCAGGGGAAATTTCATATTCTAAGTGATATCTTGTGCTGGCTTAAAACTGTGTTGATGGACTGTCCATCAGCGTGTGGAGGTTCTGGGGCCAGAACACGGGGCCAGGCCATGAATTTATAGATCAGTTGGCTTCTAGCCCACCAGCTGCGGGAGAGGAATGTGTGTGTCTGCGTAGTCAGCAAATGCCAGGTCGAGCAGAGATGTGAGCAATGACTTTGGTGAGTGCCAAGTTCTGCAGACCCTGGCCTGTGGACCAAGGCCCAGGACCCTGCTGTGTTTGCCAAGCTCTGCTCATGACAGGACCTGGTCAGAGATGCCCAGCCACACGTCACTGACTTTTGCAATAGCCCTTCTCTGAGATGCTTGTGCTTGGGCCAGACATCTACAGTCTTTGGATTCCTAGAGGAAGAAGGGGGCCGGGGAAAGTGAGTGTCCACTCAGCGGCCAACAGACCAGCTGTCTCTGCTCCTCACATATTTGCCTCAAGGCCAGCGAGATTCCCTAGCGGGGAGAGCTTTCCCGGCGAGTCTCCCAGAGCTCAGCTCAGCCAGGACTGGGTCAGACATGGTGTTCTCGGCACCTCGGCTGAGGACACCCCGCCCCCAAGCAGAGAACAGGCCCCTCTTAGCAAACCAGCAGGCTCCAGGATGGGAGTCATCATGAGACATAACAATAAAGCAATTTCCCTCTGAAAATTAATTTCAAATCAGGAGGAAATTGGATTTCTTTCCTGGCAGCGAAGAAGCCCAAGCTTGTCACTGCTGTGACTCCATTTGCTCAGGATAGAAGAGGCTCCCGGTGCGTGCATTTGATAAACTACGGAGTGCCAGTGAGAACGCATTCACATAGAGTACAGCTGCCTAGAAGCTTGTGCTGTGAGGCCAGCACAGATCTGCTGATCCCTTCCTGAGACAGCCGTAGAATGTTCTGCTCTAATTCCGTGACGCAGCCAAGAGAGATACGGCATCCGCAGTCTGGGCATGTGTCCCTGCCACTATTCCAGCTGTCAGCGGAGGATAAAATGCCTGCCAGAAAAATGTAGGAACACAGCATGGCTGGAATGAGGTGGGGTCACCCTGTGTAACCCCAGTGTGTGCTCAGTTTAGAACTAACTTCTCTCCAGGTTTCTGTGACCCGCTGCTCTCGTCTGTGGGTGCAGGCATTCACCAGCAGCTTGATGAAGGACCTCGGGCCAGAGCTGCTGGAGCAGGGGTCTCCTCAGAGGAATGGCTGGCTCTCCTAAGGCCAGAAGGATAAACCCCAGGGCCAGCAACTGTGGGAGAGACTTCAAGCAGCGTGGGTTAAGTACTGTCTGCTTATGCCCACTTCTAGAAGATTGGATTATAGTCATTGTGACCATCATGTCCGCCATATTATACCATCACTGTCACTGGCCCCACCATCACTGTCACCAAAGCCACTACCACTTCTGTCATTTCCTCATCGCTGTGATCGACGCCATGATCACTACTGTCACCAGTACCACCTTTACCATTACTATAGCCACCATCAACACCATCACCACTGTCACCATTACTACCAGCACCACTTCCTCCATCATTACTATCCCCACATCTTTATCACAACTGCCACCATTACTGCTACTGACATCACTACTACCACTGCCGTTGCCACCACTCCCACTATCCCTACCATCACCATCATCATTACCCTGCCTCACCAATACCACTATTACTGCCAACATCATCAGTACCATCCTCACTACCAACGCCATTATGATAGTGTTGATTATTATGGTGGCCGTTGTCCTTCTCACCATCACCACAAGCACCATCACCACTACCAATGCCATTACCTCCCTGCCCCCACACTGGTGCCATCCTCATGAGAATCACTGCTATCCTCCCCTCCCACCCCACGAGCCTCCACACCAGTGCACAGATAGAATTCTTGCCCAGGGTAGTGTTTTTGCACTTAGAGTATCTTGGCTGTCTCCTGAGGGTTAGGGTGGAATTTTTTCCAGTCCCTTCCCTTCCTGTGGGTTTGAACCTCTGTGCATCTTTCCTCCTGGGCCTCTCATTTGTTTAAGAATGACTGAGTTTGGAGCATGTACCTACTGTGCTGGAAACACCGAGACTCCTGTGGGACCGTGTGGTTATAAAGACTTAGCAGGACCTGTCCTCTCGAGACCCCACTCTGGTACATGTTCAGGGGATTCCCCAGGAATGGCTTGGCCTTCCCTGTCCTGGCACCACCATGGTCTTCAAGCTGAAGCTGAGGCTCGGCTGAATGCGGTTCTGAACCTCTCCATACTAGCTGGTGTGGAGTTAAGCAGTGTGCCAGATGCGGGATCGAATCCCCCAACCTTTTGACTGGAATCCCAGATCCTTCTCTCTTACTGAAGATGTCAGCACTCAAGAGCAAAGCGTGTCTTTCAGAGCTGGGCTCAGGTCTTGGATCTGGGAATATTAGGGCAAATCCTGTTGTATCGCCAGAGTCTGAGGCCACTTTGACACTTATCCAGCTTATAGAACCAGTGTTAACAATGGGATATCTGCTCGATCATGAGTCACCTAAGAGCAGCCATGCTGGCTGACATATACACCAGGAGGATTGCTAGGGGTTGTAGAACACTTCTACCTGCCAGCGTCTCTCAGTCACCTGCCTCGGAGATGTCACCAGGCTTTGAACAAGTGTTTCCTCCCTGGGTTCCTTACTTGCCCATATTTCAGGGCGAGTGTCTGTGACGTGCTTCTAGGGAGGCAAAGGCTGTTTCTCTGCAGTTTTGCTGGCAGAAGCTGAGATTCAACGGCCAGGTTGTCAGGGGAGAGCCATGCAGGCTCCAACTCAAAGCTCTCTCTGTGCCGTCCTGTGATTTTGGCTTACAGCATCTGCCCTGGCAGGGTGGCTGCCTCCTCGTCTGTCCTGTCAGTTGACTGCCAAGATGGCTAGACAGTGTATCTGAACTGCCATAGGTTAGAATCCTGGGACTGTGTTTTTGACCCAGTGGGATGTTTGAAGGTAGCTGATCATGAAATGGGGGCTCAGAGCCATTGTTCTGCCCTGGGTGTATGTCTGGCTCAGTGGAATTGTCTAGAATGGAGCAGATATGGCAAACCTCCTCTGTAAAGAACCCTGAGCTGTTGGCCTGGAAGCCCTGCTCTCACCTGCTGGGCTGAGCTGAGTCTGTCGACCATTATATTGGGGGCTTTTGGGCACCCAGTGCTGGGTGGCGGACAAGGTGAGGTCTTTTGTTCCCGTTCTAATGGGCAACTGTCTACCACTTGCACGGCATGAATAACACAGGGAATCGACAGAACCCTCCTGTCAGGACATCCAGGACCTTCCAGGAGAATGGGATCCTGGACTGGTTTGGGATGGCGGTATGGGTCAGGGTGTGCAGGTTTCCAAGGCGTCAGCCCTCTCACTGGCCTCTTCAGACACAATTCTCAACCAGCCGCATCCTACCATTCAAGGCTCTGAGCCCAGAAGGCCACTGTGGCTCTGCTTGACATAAAATTCACTCTGGTCCTTGCCAGACCGTTGTCGTAGCTGGCCATTCAAAGTGCCCATTTCCAAATAGGAGGCAGAGCTGGCCTGGGACAGGATGTTTTGCACAGACAACCCCAGGGTGGCCTGCCTGGCCCTCAGAGTCTGCGCTCTCCAGATTTCTGTTCAGCAGTGTATCCTCCACAAATAACCCAAGTCCTGAGCCTGTGCTCAGCCACTTAGGGTGGGCTTCTGGGTGACAGGCATGCTGGAGATATTCCTTGGGGTCTAATTAAAGATGCTGCATTTTGAGGTGCTTTAGTGAGACTGGGGGTTCCTCAGGACAGCCCTCCCTTGTCATTCTCCAGAGCTGTGCCCTCCTCACTTCTCCTACACAGGGATTTGGGTTTCTGCTCATGCGGTTCTCACTCACTCTCTTCAGTCCCAGAGAATCCCCCACCACTGTCCTTTTTAACTAATCTTAATAGATGTGTAGAACACACAAAACGGTCATATTAATGAGGCTCCGTGTGATAGTGGGGTTCTGTGGAGCAGAGAGGTAGCGTGTGGTGGTTTTATACTGCACGGCAGTAAGGTTCCATGTGGTGGTGGGGTACCATGTTGTGGCAGGGTACTGTGTGGTGATGGAGTACCATGCAGTAATGGGGTACTGTGTGGTAGTGGTGTACTATGTGGCAGAAGGGTACCATGTAGTGGTAGAGTGCTGGGTTATGGAGGGACCATGTTGTGGTGAGAGGTGCTGCTATGGTGGTGAGTACTGTAGTGGTGGGGTACCGTGTAGTGTAGACCATGGTGAGTATTGGGGTACCGTGTGGTGTAGACCATGGTGAGTACTGTGGCAGGGCATCATGTGATGGTGAGGCACAGCTGCTATTTTGAGGCATGGACACAAGGTTTACCACAGGCTATATACACTTCCGTTTCCTCACTCTGTTTCCTCGATACCTACTTTTGCTTGTGTGCGTATTGGATGTGACTGCCCATATCAGTGTTTGCGCACATGTATGTGCAGGTATGAGAGTGTGTGGGTGTGTGCATGCTTGTGGAGTCCACAGGAGAACTTGGGGTGTCTTCCTCAATTGCTCCCTGTCTTGTTTTGTGAGACAGGGTGTTTTACCGGTGAGCTTGAGAATCCTTCTGTCTCAGCTTCTCTAGCGCCGAGATTACAGATGTGCACCTCCATGCCTGGCTGTTACATGGAAACTGAGGATCAAACTCATGTCCTTATGTCTGCACTGCAAACACTTTGCCAGCTGAGTCATCTCCTCACCTATTCATTTATTTTCTCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCCATCTATCCATCTATCTATCAATCATCTGCTACATGGATTCTGGTGACTGAACTCAGGCTGTCAGGCTGAGTGGCAGGCGCCTTCACTGCATGACCCACCTCCCGTGCCCTGAGATGAGCTTGTTTGGATGCCATACTTTACAAGTAAGATCATCCAGCACTTACCTGTCAGTGACTGGCTTGTTGTACTTAACAGTGACAAGCGCTAACCTTTTTGTTTATTTTGTTTTTGAGTTTCTCTGTGTAGCCCTGGCTGTCCTAGACTCCTTCTGTAGGCTGGGCTGGTCTTGAGCTTAGAGATCCACCAGCCTCTGCCTCCCGAGAGCTGGGATTATAGGCGTGCACCACCACTGCCTGGCTGGATATTTTTCTGTTGGGTACACGAATTTCATTTATGTTGAGCGACATCATGAACACAGTGGTATCGGCATATCTTCAACAAACAACTTTCATTTCCTCCCAAAACATACCCTAGAGCTGCTGGGACACTCAATAGCTCTGCTTGTCCCTCTTCCCTCCATGATCTGCTCCATAACCCACAACTGAGCACCGCATGGAGCTTCCACTGTGTTCCGCTCCTGGTTTGTCTGCTGCCCCTGTCAGGTCTCTAGAACTTGAAACGCAGACAAAGCACACCTCGCCCAGGCCCTCGGGTCTGTTTTCTATCCTTGGAAGGGATCTGTTGGTTTTTTATCATCTTAACTTTGTGGGGGTGGGAGGGACACAGGATCCATCTAGACAGACAAGGTTGTCCTTGAATCACAATGCTTCCTCAGCCTCCTGAGAACTGGATTTGTGCCTGGCTTCAACCATTTTAAACCTTCTATCCAGTAAAGTACTCACGCACCCTGTTGTGAGATTGCTCAGCTGAAACTCAAACCCATTGGACAAAGCCCAGTCCTGGAAAGCAGTGCCCTGTGGAACCCTGCAGTGTAGACCCTATGAGACTGCCCTGTGTCACTCAGCACAGCCTGGGCTTTGTCCTCATCCCAGCAGGTGTCAGGCCATCCTTCCTGCCTGAAGGTGACTGCTGTCCTGTTGTGTGAATGAACTCTGGGGCTGCTTCCCGTCTCCAGCTGCTGTGTGTGATACCAGTGTGAGAATCCCTCTGTGAGCTCTGCCTCCCATCCGCACTGGGGTTGGTGGGGGGGGGGGAGGTGTTTACACAGAAGCTGGGCCACACCACCTAGGTCTACGTTAACATTTCAAGAGGGTGTCACGCTCTTCATGGCAACAGCACCATGTTTTGGTCCTGCCAGCAAACACAAAACTGGTTTCTCGATATCCTCGCCAGCATCTGTTACCTTTTGCCTTGTTTTTTTGTAAAATCTAGGTTACATTTGGAGCTTGTGTGTGTGAGGATGCATGTTACGGCGTGTCTGTGGAGGTCAGAGGACAACTTGGAGGAGTCGGTTCTGTTCTTCCGCCATGTTGAACCTAGGGGTAGAACTCAGGAGCACCTTTTCCCATAGTCACCATCTCTACCCTGCTTGCTTAAAAAAGGGAAAAAAATTGTTTTGTTTTGTTTTTCCCAGTCAGGGTTTCTTCATGTAGCCCAGGCTGGCCCGGAACTCAGAGATCAACTCCCTTCTGCTTCCCCACTGTTCTGGTTACAGGCATGCACCACCACTACTGGGTTTGAAAGATTTTTTTAAAATTTTTATTTTTTCTAGACAAACTTTTTTCTTTTGAGACAGGATTTCTGTATGTAGCTCTGGCTGTCCTGGAACTCGATCTGTAGAACAGGCTAGCCTCAAACTCACAGAGATCTGTCTGCTTCTACCTCCTGAGCGCGCTGCCGCCGTCAGACTGGACTTGGGTTTTAATTGTGTGTACCCGTGTGTGGGTGTGCTGAGTGCCTCCATGGAGTTTACGTCCAGATGCTCCACTGGGTTTCGTTGCTCTGGTTCTCTGTCCTTATGACAGCTGCTTTGACTGCCATGGCCTAGTTGCTGTCTGTTTGGAAATGACCGGGTGAATTCCCCAATTCTGTCAGTGCTTCGAGTCTGATGTGGCTCTTAGGGTCAGTGGAGAGTTCGTATGAGCTGTAAGAGGTTGTTTTTCTATGTCTGCAACTTAATAAACACCAGTGGGACTCGGCCGGGGCTGTGTAGCTTCTGTGCTGCTTTGGGTGTTCGGGTGTTTTAGTAATAATACGTCTCCCAATCCCTACCGTGGGTGTCTTTATTTATTATCCGAAAATCCTTTCACCTCTCGGCTACGAATATTCCTAAATATTTGAATGCTGGTACGACTAACTTTGTTTTAATTTCCATCTTTTGTTTTTGAAGTTTTGAGACACTCCATCAAGCCCAGGCTGACCTGAAACTTCCTATGTAACTGGGGATGACTTTAAACTCCTCAATCCTCCTGCCTCCACCTCTCGTCTCTGGGATGGCAGATGGGATGGTACATTTCTGGCTTAATTTCCATTTCTGGGTTGTTCCTTGGTAACAGATGACTTTGTATGTTGGTTTTGGGCCCTGAAACCGGGGGTTCTGTTTACTGTGGAATCATTACAGCGAGACAGGGTTTTATCAAAACCTGGTTCAAGGCCCTTCCTGCCAACCTTTTGTAATTCTAGCTCCATCCATTGCCAGTAGCATCCTTCAAGGAGTGCTGTCTTCTCTTAAGCCTTCTTTATTTTGTACTATCTTGGTACTGGGAATCAAATCCAGGACCTTCCACATGCTAGGCATCTTAGCATGTCATGTCATGCTAGAACATGCTAAGTCATGCTAGGTCATGCTAACTCATGCTTGGTCATGCTAAGTCATGCTAGGTCATGCTAGGTTATACTAAGTCATGATAAGACATGTTAGGTCATACTAGGACATGATAGGTGTCCTATCACTGTGCTGTATCTTCAACCCTTTCTTAATCTTAAAGCCACCTGAGCTGGGATGTCATCCTTGTCCCTGTCCTTGATGTTTGTCCCCCGGTTTCCCAGGTCTGTGCATTCATATTTTCATTTTTCTTTATGGATGAACAAAACTCTACCGTACCATCCACTCATCCAGGGATGGGCGTCTAGGCTGGCTCCGTTTCCTTGCGAGTGTGTCTCAAGCAGCAATGAACACAGTTGTGCAAGTGCCCAGGCCAGCATTTGATGGCAGGTAAATGTGTGCCTGCGTGGATTCTGTAACAATCCGTGCTCATTGCTTAGATGGGGCACAAAGGCTGAGCCTTCGAGGTAGCTGCGAGGTACCTGGCCCAAAAAATGAGTTTGTTCTCAGTCTTGCCCCATCCTTATGTGTCACTATGAGAAGAAATGAGACCTGCCCTTAACTCTATTGCATCAAGGGGGAAAAAATGTAAGACACCCAGTGACCCATAACCTACAGACCTGGAAGGCACACAGACTTCTCCAAATTCTCACTGTGCCAGTAGGGAGTAGAACCTACCATCTTCTCTCGGGAGTTTCTTCTTGGCACCTGCCATGGGCCACGTTGCTCTGTAGTGGAGACCCAGAAGTTGGCCACCTTGTGTCCCACTGAGGTCAGGAGATCTCAAGCATCCGTGGGCATCCCCTACCTGTGTGCTTGGCTTGGATGAGGAGTGTCTGAACAGGGAGGTTGGGTGCACTTTAAAAATTACTTTCCCTGCTTCGAAATGACGCTGGCTTTGAGCCCCAAGCTCCTTCAGGGCTGTCTAAAATTAGCACCCTGGTGACAAGGCGGTCTTTGTCAGGGGCTCACAGCTTGTACAGGGAGGCAGAGAAATGTCAACAGCACAGTTTCTACATCAGTGTGAGGTTTTTTTTCACAAGGCCAGGCAAATGGCGCTGCTTCAAAGGCCTCTAGTACCCAGTTTCTCAGTGGCTTTGTGATTAGACTGGAAGGTTCATAGGGTGCTGGCTTTGTGGTCAGACAGCAGGGTAGCTCCCTTCTCCAAACAGCACAGGGGTGGTGCACTGGCCTGGCCACCTCTATCTGTGAGGTGTTTTGATGAGCTGAGCAGTGACCCAGGGCTTCTATGCGCTCTTGGGGACATTCACTCACATCCCACAGCTTGCCTGCAGGCTGGGGGAAGTGGGCATCAGTTGTTGGGTGTGTTGGGCTTGGTCCATGTCCCTAAGCTAAATGTTTGGAAAGAATGATTCTTCTGGGAAAGGGAGCCTTCACATTGGCTGTGTGGGTATGGATATGCCTTCCCAGACCCCTGCTCTTCCCACATGGGCCTCGATGCCCTTCCTGCATGGCTATGGTTAAGTGGGATGTGTGTGTAAAGGTCTCAGCCCGGGGACAACAGATAAATGGTGGTGTCATCCCTGTGTTTGTGAGCCTCAGTTTCTGGAAGGCACACTGGTTATTCATGTGGCTTCCTGAGTGATGGATTTGACCCTGGATCGGCACTGGCAGGACATGAACTATATCGACTTCCCACCTGCTTCCCGAGAGCCTGGGCTCAACATGGCAGAACCTGTGGATGTGGCCATCTTTGGGAGTAAGGTCCTGGCAGATGGGACTGGACGAGGGAATGTGCACACAGTCACCGTCTTGCTGCTGTGACAAAGTGTCTGGCCAAAGCGTCTTGAGGAAGGAAAGCCAGAGGTGGCCCACACCTTTAACCCCAGCACTCAGGAGTCAGAGGCAGGTGGAGCTCTGAGTTCAAGGAGAGCCTGTTCTACAGAGCAAGTTCCGGGACAGCCAGGGTTACACAGAGACACCCTGTCTTGAACAAGCAAAGAAGCATTTATTTGAGCTCACCATTTGAAGGTCAGATCCATCATGGTGGGGAAGGTGTGCTCAGCTGTCTATGGTCAGGGACAGAAAGAGAGCACCTGGCTCATTTTCTTCTTATTCTGTCTGAGAGCTCAGCCCTTGGAATGGTGCCACACACACTGGGAGCGACTCTTCCTACCTCAGTTCACTCCATCTAGAAACTCCCCCAGACATGCCCAGAGCTTTGTCTCCTAGGCGACTCTCGATTCTATCGTGTTGATAGTATCAACTGTCCCAGTTGTTAAGATGCGGTTCTTCAGAGTCCACATAAGTCCAAAGCCCCATGTCAGAGTCCTGGTAAGAGCTGAAGTGACACACAGATTGGCAGTGGAAGAGGGCAGCAGATGCAGAGTGACACAGAGAGCTGTGGAGCATTACTGGAACCCTTGCTTTGGGAGAAACCAGGAGGTATTTCCTGAGCCTCTAGGCATGGCTCGGCCATACCCTGATCTGAGGCTGGGAAGCCCCAAGATAGACGTGGAGTTCATTTCCATCGGTTTAAGCCCATGTGGTTTCTGGTTAGTTGCTTGACCACAGGGAACCTGTTGGTCACTCCTGGGGTTTGAAGCCAGGAGGTGGAGTCTGTCTCCCTCTCTCTACATCGAATTCTCCTCCTTCACTTGAAGATTCTCAGCTCAGCTTATGTGAGCACTCCTCAGAAAGCACCGTTTCTCAGGGGCTGCTGGCAAGTGGCAGTCTGTGCCTGGGCATCAGCAATCCAAGCAGCCGTAACTGATCCACACGCTTGTCTCCCCAG
Seq C2 exon
GTCCGAGCCATCCGGCTATCCTTTGTCGGGGAGCTGGGATGGGAGCTGCATGTGCCCCAAGCGTCCTGCTTGCCTGTGTACCGGGCTGTGATGGCTGCAGGGGCGAAGCACGGCCTAGTCAATGCAGGCTACCGTGCCATCGACTCCCTGAGCATTGAGAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000006916:ENSRNOT00000009555:18
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0157116=GCV_T=FE(13.5=100)
A:
NA
C2:
PF0157116=GCV_T=FE(23.6=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]