Special

ENSBTAG00000018920 @ bosTau6

Biotype
protein_coding
Gene Symbol
TRIM47
Description
tripartite motif containing 47 [Source:HGNC Symbol;Acc:HGNC:19020]
Coordinates
chr19:56373299-56377735:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
52.16
46.85
0
Alternative 3'ss
3
chr19:56376452-56376454
+
47.84
46.85
0
Exon Skipping
96
chr19:56374997-56375092
+
96.17
26.03
0
Intron Retention
987
chr19:56374010-56374996
+
16.01
21.47
0
Intron Retention
297
chr19:56375093-56375389
+
23.08
58.34
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000132481 TRIM47 1-to-1
Human hg19 ENSG00000132481 TRIM47 1-to-1
Mouse mm10 ENSMUSG00000020773 Trim47 1-to-1
Mouse mm9 ENSMUSG00000020773 Trim47 1-to-1
Rat rn6 ENSRNOG00000008215 Trim47 1-to-1
Chicken galGal4 ENSGALG00000028301 TRIM47 1-to-1