Special

ENSBTAG00000038619 @ bosTau6

Biotype
protein_coding
Gene Symbol
'
Description
Bos taurus major histocompatibility complex, class I (LOC512672), mRNA. [Source:RefSeq mRNA;Acc:NM_001076841]
Coordinates
chr23:28299437-28311309:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
88.55
58.21
0
Alternative 3'ss
455
chr23:28305339-28305793
+
11.35
58.21
0
Exon Skipping
281
chr23:28298512-28298792
+
37.77
50.97
0
Exon Skipping
273
chr23:28307639-28307911
+
13.26
40.81
0
Intron Retention
823
chr23:28304971-28305793
+
15.02
49.15
0
Intron Retention
399
chr23:28306282-28306680
+
22.61
43.93
0
Intron Retention
361
chr23:28306732-28307092
+
16.65
62.12
0
Intron Retention
3520
chr23:28307132-28310651
+
22.91
28.29
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000053835 H2-T24 1-to-1
Mouse mm9 ENSMUSG00000053835 H2-T24 1-to-1
Rat rn6 ENSRNOG00000000787 AABR07044364.1 1-to-4
Rat rn6 ENSRNOG00000032596 RT1-T24-1 1-to-4
Rat rn6 ENSRNOG00000042905 RT1-T24-4 1-to-4
Rat rn6 ENSRNOG00000045924 RT1-T24-3 1-to-4
Chicken galGal4 ENSGALG00000000178 BF1 15-to-17
Chicken galGal4 ENSGALG00000024348 15-to-17
Chicken galGal4 ENSGALG00000024372 BFIV21 15-to-17
Chicken galGal4 ENSGALG00000027293 15-to-17
Chicken galGal4 ENSGALG00000027944 15-to-17
Chicken galGal3 ENSGALG00000000178 F1NS77_CHICK 15-to-24
Chicken galGal3 ENSGALG00000024348 F1NFX9_CHICK 15-to-24
Zebrafish danRer10 ENSDARG00000039164 CABZ01031754.1 15-to-4
Zebrafish danRer10 ENSDARG00000059039 CABZ01031753.1 15-to-4
Zebrafish danRer10 ENSDARG00000075963 mhc1uba 15-to-4
Zebrafish danRer10 ENSDARG00000092731 mhc1uka 15-to-4