Special

ENSG00000050405 @ hg38

Biotype
protein_coding
Gene Symbol
LIMA1
Description
LIM domain and actin binding 1 [Source:HGNC Symbol;Acc:HGNC:24636]
Coordinates
chr12:50175788-50283546:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
113
chr12:50192452-50192564
-
97.71
14.42
1
Exon Skipping
108
chr12:50200777-50200884
-
99.46
54.44
0
Exon Skipping
59
chr12:50185390-50185448
-
1.73
58
0
Intron Retention
3667
chr12:50200885-50204551
-
10.48
70.11
0
Intron Retention
3265
chr12:50192565-50195829
-
13.47
36.33
0
Intron Retention
9179
chr12:50222486-50231664
-
5.21
28.36
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000023022 Lima1 1-to-1
Mouse mm9 ENSMUSG00000023022 Lima1 1-to-1
Rat rn6 ENSRNOG00000059801 Lima1 1-to-1
Cow bosTau6 ENSBTAG00000012342 LIMA1 1-to-1
Chicken galGal4 ENSGALG00000006169 LIMA1 1-to-1
Chicken galGal3 ENSGALG00000006169 LIMA1 1-to-1
Zebrafish danRer10 ENSDARG00000101441 LIMA1 1-to-1