Special

ENSG00000131378 @ hg38

Biotype
protein_coding
Gene Symbol
RFTN1
Description
raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
Coordinates
chr3:16313574-16514026:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
116
chr3:16357932-16358047
-
97.47
28.33
0
Exon Skipping
157
chr3:16493721-16493877
-
99.57
9.76
1
Exon Skipping
54
chr3:16347632-16347685
-
2.17
48.61
0
Intron Retention
3315
chr3:16323458-16326772
-
10.35
61.84
0
Intron Retention
6143
chr3:16317233-16323375
-
11.06
69.58
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000039316 Rftn1 1-to-1
Mouse mm9 ENSMUSG00000039316 Rftn1 1-to-1
Rat rn6 ENSRNOG00000011321 Rftn1 1-to-1
Cow bosTau6 ENSBTAG00000030593 RFTN1 1-to-1
Chicken galGal4 ENSGALG00000011241 RFTN1 1-to-1
Chicken galGal3 ENSGALG00000011241 RFTN1 1-to-1
Zebrafish danRer10 ENSDARG00000070831 rftn1a 1-to-2
Zebrafish danRer10 ENSDARG00000098654 RFTN1 (2 of 2) 1-to-2