Special

ENSG00000148288 @ hg19

Biotype
protein_coding
Gene Symbol
GBGT1
Description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:20460]
Coordinates
chr9:136028340-136039332:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
80.48
38.78
0
Alternative 3'ss
37
chr9:136031453-136031489
-
19.52
38.78
0
Alternative 3'ss
0
NA
-
16.39
38.95
0
Alternative 3'ss
19
chr9:136029630-136029648
-
83.61
38.95
0
Exon Skipping
135
chr9:136030565-136030699
-
96.94
34.71
0
Intron Retention
5401
chr9:136031453-136036853
-
14.63
16.61
0
Intron Retention
78
chr9:136031324-136031401
-
14
39.93
0
Intron Retention
916
chr9:136029649-136030564
-
25.57
85.84
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026829 Gbgt1 1-to-1
Mouse mm9 ENSMUSG00000026829 Gbgt1 1-to-1
Cow bosTau6 ENSBTAG00000030319 GBGT1 1-to-1
Chicken galGal4 ENSGALG00000003340 GBGT1 3-to-1
Chicken galGal3 ENSGALG00000003340 GBGT1 3-to-1
Zebrafish danRer10 ENSDARG00000011283 CABZ01024426.1 1-to-8
Zebrafish danRer10 ENSDARG00000019207 abo 1-to-8
Zebrafish danRer10 ENSDARG00000035555 gbgt1l3 1-to-8
Zebrafish danRer10 ENSDARG00000068503 gbgt1l4 1-to-8
Zebrafish danRer10 ENSDARG00000091944 si:ch211-287c22.1 1-to-8