Special

ENSG00000148288 @ hg38

Biotype
protein_coding
Gene Symbol
GBGT1
Description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20460]
Coordinates
chr9:133152948-133163945:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
79.84
38.46
0
Alternative 3'ss
37
chr9:133156066-133156102
-
20.16
38.46
0
Alternative 3'ss
0
NA
-
17.71
54.93
0
Alternative 3'ss
19
chr9:133154243-133154261
-
82.22
54.93
0
Alternative 5'ss
0
NA
-
11.44
33.33
0
Alternative 5'ss
5
chr9:133156015-133156019
-
88.56
33.33
0
Intron Retention
5401
chr9:133156066-133161466
-
25.3
59.1
0
Intron Retention
78
chr9:133155937-133156014
-
13.52
39.93
0
Intron Retention
588
chr9:133155313-133155900
-
11.69
38.2
0
Intron Retention
916
chr9:133154262-133155177
-
23.25
86.89
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026829 Gbgt1 1-to-1
Mouse mm9 ENSMUSG00000026829 Gbgt1 1-to-1
Cow bosTau6 ENSBTAG00000030319 GBGT1 1-to-1
Chicken galGal4 ENSGALG00000003340 GBGT1 1-to-1
Chicken galGal3 ENSGALG00000003340 GBGT1 3-to-1
Zebrafish danRer10 ENSDARG00000019207 abo 2-to-10
Zebrafish danRer10 ENSDARG00000025275 gbgt1l1 2-to-10
Zebrafish danRer10 ENSDARG00000068503 gbgt1l4 2-to-10
Zebrafish danRer10 ENSDARG00000091936 si:ch211-135f11.5 2-to-10
Zebrafish danRer10 ENSDARG00000091944 si:ch211-287c22.1 2-to-10