Special

ENSG00000154262 @ hg19

Biotype
protein_coding
Gene Symbol
ABCA6
Description
ATP-binding cassette, sub-family A (ABC1), member 6 [Source:HGNC Symbol;Acc:36]
Coordinates
chr17:67074847-67138015:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
120
chr17:67087284-67087403
-
92.53
37.74
0
Exon Skipping
139
chr17:67109363-67109501
-
96.25
30.77
0
Exon Skipping
104
chr17:67130780-67130883
-
93.1
18.05
0
Exon Skipping
142
chr17:67125751-67125892
-
93.96
46.45
0
Intron Retention
257
chr17:67109502-67109758
-
9.6
39.6
0
Intron Retention
4977
chr17:67087404-67092380
-
9.78
34.07
0
Intron Retention
1206
chr17:67084400-67085605
-
12.95
27.66
0
Intron Retention
693
chr17:67083615-67084307
-
10.21
41.35
0
Intron Retention
1349
chr17:67130884-67132232
-
36.71
96.79
0
Intron Retention
771
chr17:67130009-67130779
-
22.78
50
0
Intron Retention
805
chr17:67124946-67125750
-
10.9
29.03
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000044749 Abca6 2-to-1
Mouse mm9 ENSMUSG00000044749 Abca6 2-to-1
Rat rn6 ENSRNOG00000046890 Abca6 1-to-1
Cow bosTau6 ENSBTAG00000006921 ABCA6 1-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2
Zebrafish danRer10 ENSDARG00000074041 abca5 5-to-1