Special

ENSG00000162909 @ hg19

Biotype
protein_coding
Gene Symbol
CAPN2
Description
calpain 2, (m/II) large subunit [Source:HGNC Symbol;Acc:1479]
Coordinates
chr1:223889347-223963720:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
1889
chr1:223945083-223946971
+
11.86
54.15
0
Intron Retention
537
chr1:223957612-223958148
+
14.14
56.69
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026509 Capn2 1-to-1
Mouse mm9 ENSMUSG00000026509 Capn2 1-to-1
Rat rn6 ENSRNOG00000034015 Capn2 1-to-1
Cow bosTau6 ENSBTAG00000012778 CAPN2 1-to-1
Chicken galGal4 ENSGALG00000009360 CAPN2 1-to-1
Chicken galGal3 ENSGALG00000009360 CAPN2 1-to-1
Zebrafish danRer10 ENSDARG00000034211 capn2l 1-to-3
Zebrafish danRer10 ENSDARG00000055592 capn2b 1-to-3
Zebrafish danRer10 ENSDARG00000091699 capn2a 1-to-3