Special

ENSG00000162909 @ hg38

Biotype
protein_coding
Gene Symbol
CAPN2
Description
calpain 2 [Source:HGNC Symbol;Acc:HGNC:1479]
Coordinates
chr1:223701593-223776018:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
1889
chr1:223757381-223759269
+
10.76
54.72
0
Intron Retention
537
chr1:223769910-223770446
+
12.39
56.69
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026509 Capn2 1-to-1
Mouse mm9 ENSMUSG00000026509 Capn2 1-to-1
Rat rn6 ENSRNOG00000034015 Capn2 1-to-1
Cow bosTau6 ENSBTAG00000012778 CAPN2 1-to-1
Chicken galGal4 ENSGALG00000009360 CAPN2 1-to-1
Chicken galGal3 ENSGALG00000009360 CAPN2 1-to-1
Zebrafish danRer10 ENSDARG00000055592 capn2b 1-to-2
Zebrafish danRer10 ENSDARG00000091699 capn2a 1-to-2