Special

ENSG00000165689 @ hg38

Biotype
protein_coding
Gene Symbol
SDCCAG3
Description
serologically defined colon cancer antigen 3 [Source:HGNC Symbol;Acc:HGNC:10667]
Coordinates
chr9:136401922-136410609:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
84.09
100
0
Alternative 5'ss
216
chr9:136409874-136410089
-
15.55
100
0
Exon Skipping
69
chr9:136408999-136409067
-
50.67
95.95
0
Exon Skipping
150
chr9:136410090-136410239
-
31.25
76.89
0
Intron Retention
88
chr9:136410240-136410327
-
18.68
100
0
Intron Retention
2151
chr9:136407939-136410089
-
13.18
38.4
0
Intron Retention
1166
chr9:136405979-136407144
-
21.53
72.73
0
Intron Retention
702
chr9:136405203-136405904
-
17.63
69.31
0
Intron Retention
397
chr9:136404694-136405090
-
14.06
54.22
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026927 Sdccag3 1-to-1
Mouse mm9 ENSMUSG00000026927 Sdccag3 1-to-1
Rat rn6 ENSRNOG00000018876 Sdccag3 1-to-1
Cow bosTau6 ENSBTAG00000001352 SDCCAG3 1-to-1
Chicken galGal4 ENSGALG00000001921 SDCCAG3 1-to-1
Chicken galGal3 ENSGALG00000001921 1-to-1
Zebrafish danRer10 ENSDARG00000095515 sdccag3 1-to-1