Special

ENSG00000170175 @ hg38

Biotype
protein_coding
Gene Symbol
CHRNB1
Description
cholinergic receptor nicotinic beta 1 subunit [Source:HGNC Symbol;Acc:HGNC:1961]
Coordinates
chr17:7445061-7457707:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
210
chr17:7448579-7448788
+
88.06
33.62
0
Intron Retention
351
chr17:7447152-7447502
+
11.76
31.8
0
Intron Retention
928
chr17:7447651-7448578
+
3.09
74.91
0
Intron Retention
5508
chr17:7448789-7454296
+
4.13
76
0
Intron Retention
763
chr17:7454521-7455283
+
7.43
51.32
0
Intron Retention
337
chr17:7455457-7455793
+
16.87
96.15
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000041189 Chrnb1 1-to-1
Mouse mm9 ENSMUSG00000041189 Chrnb1 1-to-1
Rat rn6 ENSRNOG00000014698 Chrnb1 1-to-1
Cow bosTau6 ENSBTAG00000019242 CHRNB1 1-to-1
Chicken galGal3 ENSGALG00000007906 F1NJ22_CHICK 2-to-1
Zebrafish danRer10 ENSDARG00000022532 chrnb1l 1-to-2
Zebrafish danRer10 ENSDARG00000069660 chrnb1 1-to-2
Fruitfly dm6 FBgn0000038 nAChRbeta1 4-to-1