Special

ENSG00000182472 @ hg19

Biotype
protein_coding
Gene Symbol
CAPN12
Description
calpain 12 [Source:HGNC Symbol;Acc:13249]
Coordinates
chr19:39220832-39235114:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
134
chr19:39232417-39232550
-
93.91
14.63
0
Exon Skipping
60
chr19:39226010-39226069
-
81.52
47.94
0
Exon Skipping
58
chr19:39225453-39225510
-
80.67
52.49
0
Exon Skipping
71
chr19:39224959-39225029
-
76.08
56.83
0
Exon Skipping
63
chr19:39224782-39224844
-
68.37
72.73
0
Exon Skipping
79
chr19:39224343-39224421
-
94.08
21.84
0
Intron Retention
72
chr19:39226070-39226141
-
59.41
44.9
0
Intron Retention
423
chr19:39225030-39225452
-
29.76
83.06
0
Intron Retention
360
chr19:39224422-39224781
-
21.04
55.67
0
Intron Retention
83
chr19:39221664-39221746
-
8.71
57.12
0
Intron Retention
86
chr19:39221519-39221604
-
19.11
93.15
0
Intron Retention
70
chr19:39229144-39229213
-
42
93.1
0
Intron Retention
70
chr19:39228988-39229057
-
23.98
21.31
0
Intron Retention
634
chr19:39228279-39228912
-
58.97
75.96
0
Intron Retention
86
chr19:39228029-39228114
-
41.83
95.7
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000054083 Capn12 1-to-1
Mouse mm9 ENSMUSG00000054083 Capn12 1-to-1
Rat rn6 ENSRNOG00000020389 Capn12 1-to-1
Cow bosTau6 ENSBTAG00000013239 CAPN12 1-to-1