Special

ENSG00000182472 @ hg38

Biotype
protein_coding
Gene Symbol
CAPN12
Description
calpain 12 [Source:HGNC Symbol;Acc:HGNC:13249]
Coordinates
chr19:38730187-38769904:-
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
90.09
26.1
0
Alternative 3'ss
159
chr19:38733782-38733940
-
9.91
26.1
0
Exon Skipping
59
chr19:38730965-38731023
-
96.62
86.36
0
Exon Skipping
134
chr19:38741777-38741910
-
85.63
75
0
Exon Skipping
60
chr19:38735370-38735429
-
79.25
61.64
0
Exon Skipping
58
chr19:38734813-38734870
-
81.13
58.23
0
Exon Skipping
71
chr19:38734319-38734389
-
80.99
56.83
0
Exon Skipping
63
chr19:38734142-38734204
-
70.26
90.68
0
Exon Skipping
79
chr19:38733703-38733781
-
95.85
21.84
0
Exon Skipping
78
chr19:38742248-38742325
-
7.68
23.42
0
Exon Skipping
70
chr19:38743033-38743102
-
20.64
81.26
0
Intron Retention
72
chr19:38735430-38735501
-
49.75
94.2
0
Intron Retention
423
chr19:38734390-38734812
-
20.54
90.91
0
Intron Retention
114
chr19:38734205-38734318
-
8.51
90.16
0
Intron Retention
360
chr19:38733782-38734141
-
18.22
91.53
0
Intron Retention
2479
chr19:38731224-38733702
-
22.27
93.55
0
Intron Retention
83
chr19:38731024-38731106
-
8.39
69.94
0
Intron Retention
86
chr19:38730879-38730964
-
18.51
93.15
0
Intron Retention
1557
chr19:38740220-38741776
-
25.74
100
0
Intron Retention
1402
chr19:38738649-38740050
-
46.84
98.55
0
Intron Retention
70
chr19:38738504-38738573
-
53.7
97.14
0
Intron Retention
70
chr19:38738348-38738417
-
54.39
89.86
0
Intron Retention
634
chr19:38737639-38738272
-
63.93
79.41
0
Intron Retention
86
chr19:38737389-38737474
-
57.95
95.7
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000054083 Capn12 1-to-1
Mouse mm9 ENSMUSG00000054083 Capn12 1-to-1
Rat rn6 ENSRNOG00000020389 Capn12 1-to-1
Cow bosTau6 ENSBTAG00000013239 CAPN12 1-to-1
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