Special

ENSG00000196189 @ hg38

Biotype
protein_coding
Gene Symbol
SEMA4A
Description
semaphorin 4A [Source:HGNC Symbol;Acc:HGNC:10729]
Coordinates
chr1:156147366-156177752:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
39.36
38.48
0
Alternative 5'ss
9
chr1:156153756-156153764
+
60.64
38.48
0
Exon Skipping
151
chr1:156162944-156163094
+
98.44
29.73
0
Exon Skipping
168
chr1:156154550-156154717
+
79.1
62.66
0
Exon Skipping
119
chr1:156174822-156174940
+
93.23
92.26
0
Exon Skipping
158
chr1:156175086-156175243
+
97.14
60.17
0
Exon Skipping
101
chr1:156175556-156175656
+
98.72
50.82
0
Intron Retention
785
chr1:156153765-156154549
+
17.82
91.97
0
Intron Retention
9731
chr1:156163095-156172825
+
3.82
65.71
0
Intron Retention
1815
chr1:156173007-156174821
+
10.72
79.31
0
Intron Retention
145
chr1:156174941-156175085
+
8.59
74.26
0
Intron Retention
312
chr1:156175244-156175555
+
12.08
94.87
0
Intron Retention
748
chr1:156175657-156176404
+
5.08
57.14
0
Intron Retention
1696
chr1:156154718-156156413
+
11.29
96.15
0
Intron Retention
1495
chr1:156156575-156158069
+
5.22
31.08
0
Intron Retention
255
chr1:156158133-156158387
+
8.27
91.08
0
Intron Retention
232
chr1:156158487-156158718
+
12.72
89.38
0
Intron Retention
1618
chr1:156158825-156160442
+
6.27
53.49
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000028064 Sema4a 1-to-1
Mouse mm9 ENSMUSG00000028064 Sema4a 1-to-1
Rat rn6 ENSRNOG00000019737 Sema4a 1-to-1
Cow bosTau6 ENSBTAG00000012228 SEMA4A 1-to-1
Zebrafish danRer10 ENSDARG00000062352 sema4ab 1-to-2
Zebrafish danRer10 ENSDARG00000077103 sema4aa 1-to-2