Special

ENSMUSG00000028064 @ mm10

Biotype
protein_coding
Gene Symbol
Sema4a
Description
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]
Coordinates
chr3:88435959-88461182:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
37
chr3:88451414-88451450
-
88.56
32.94
0
Alternative 5'ss
0
NA
-
51.41
29.94
0
Alternative 5'ss
23
chr3:88455258-88455280
-
48.59
29.94
0
Exon Skipping
113
chr3:88455080-88455192
-
7.6
74.76
0
Exon Skipping
137
chr3:88455548-88455684
-
23.48
40.21
0
Exon Skipping
91
chr3:88456134-88456224
-
23.16
97.64
0
Intron Retention
237
chr3:88451451-88451687
-
13.92
41.56
0
Intron Retention
701
chr3:88454847-88455547
-
15.31
87.88
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196189 SEMA4A 1-to-1
Human hg19 ENSG00000196189 SEMA4A 1-to-1
Rat rn6 ENSRNOG00000019737 Sema4a 1-to-1
Cow bosTau6 ENSBTAG00000012228 SEMA4A 1-to-1
Zebrafish danRer10 ENSDARG00000062352 sema4ab 1-to-2
Zebrafish danRer10 ENSDARG00000077103 sema4aa 1-to-2