Special

ENSG00000204642 @ hg19

Biotype
protein_coding
Gene Symbol
HLA-F
Description
major histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:4963]
Coordinates
chr6:29690552-29706305:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
92.02
71.91
0
Alternative 3'ss
18
chr6:29693770-29693787
+
7.98
71.91
0
Alternative 3'ss
0
NA
+
4.58
29.63
0
Alternative 3'ss
17
chr6:29691950-29691966
+
95.42
29.63
0
Exon Skipping
33
chr6:29693788-29693820
+
92.82
29.15
0
Exon Skipping
122
chr6:29694660-29694781
+
60.3
86.98
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000067212 H2-T23 6-to-30
Mouse mm10 ENSMUSG00000067235 H2-Q10 6-to-30
Mouse mm10 ENSMUSG00000073409 H2-Q6 6-to-30
Mouse mm9 ENSMUSG00000067212 H2-T23 6-to-30
Mouse mm9 ENSMUSG00000067235 H2-Q10 6-to-30
Mouse mm9 ENSMUSG00000073406 H2-Bl 6-to-30
Mouse mm9 ENSMUSG00000073409 H2-Q6 6-to-30
Mouse mm9 ENSMUSG00000079491 H2-T10 6-to-30
Rat rn6 ENSRNOG00000000763 RT1-M3-1 6-to-20
Rat rn6 ENSRNOG00000048951 LOC100364500 6-to-20
Rat rn6 ENSRNOG00000050998 AABR07044397.1 6-to-20
Rat rn6 ENSRNOG00000059770 AABR07044383.1 6-to-20
Rat rn6 ENSRNOG00000060412 RT1-M4 6-to-20
Cow bosTau6 ENSBTAG00000002069 BOLA 6-to-10
Cow bosTau6 ENSBTAG00000005182 BOLA 6-to-10
Cow bosTau6 ENSBTAG00000008959 6-to-10
Cow bosTau6 ENSBTAG00000019386 BOLA-NC 6-to-10
Cow bosTau6 ENSBTAG00000022590 BOLA 6-to-10
Chicken galGal4 ENSGALG00000004617 8-to-17
Chicken galGal4 ENSGALG00000024372 BFIV21 8-to-17
Chicken galGal4 ENSGALG00000027944 8-to-17
Chicken galGal4 ENSGALG00000029093 8-to-17
Chicken galGal4 ENSGALG00000026145 9-to-24
Chicken galGal4 ENSGALG00000027293 9-to-24
Chicken galGal4 ENSGALG00000027955 9-to-24
Chicken galGal4 ENSGALG00000028268 9-to-24
Chicken galGal4 ENSGALG00000029079 9-to-24
Zebrafish danRer10 ENSDARG00000039164 CABZ01031754.1 9-to-4
Zebrafish danRer10 ENSDARG00000059039 CABZ01031753.1 9-to-4
Zebrafish danRer10 ENSDARG00000075963 mhc1uba 9-to-4
Zebrafish danRer10 ENSDARG00000092731 mhc1uka 9-to-4