Special

ENSMUSG00000020882 @ mm10

Biotype
protein_coding
Gene Symbol
Cacnb1
Description
calcium channel, voltage-dependent, beta 1 subunit [Source:MGI Symbol;Acc:MGI:102522]
Coordinates
chr11:98001508-98023034:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
95.46
71.11
0
Alternative 5'ss
292
chr11:98010004-98010295
-
4.54
71.11
0
Exon Skipping
155
chr11:98011343-98011497
-
30.46
100
0
Exon Skipping
20
chr11:98010627-98010646
-
36.61
100
0
Exon Skipping
81
chr11:98010296-98010376
-
96.67
30.16
0
Intron Retention
2575
chr11:98019767-98022341
-
16.78
57.89
0
Intron Retention
2837
chr11:98016843-98019679
-
8.56
26.46
0
Intron Retention
250
chr11:98010377-98010626
-
19.57
55.03
0
Intron Retention
379
chr11:98009917-98010295
-
12.26
48.91
0
Intron Retention
1766
chr11:98003363-98005128
-
26.82
71.34
0
Intron Retention
1219
chr11:98010647-98011865
-
18.91
65.61
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000067191 CACNB1 1-to-1
Human hg19 ENSG00000067191 CACNB1 1-to-1
Rat rn6 ENSRNOG00000004518 Cacnb1 1-to-1
Cow bosTau6 ENSBTAG00000002036 CACNB1 1-to-1
Chicken galGal4 ENSGALG00000025788 CACNB1 1-to-1
Zebrafish danRer10 ENSDARG00000002167 cacnb1 1-to-1
Fruitfly dm6 FBgn0259822 Ca-beta 2-to-1