Special

ENSMUSG00000029205 @ mm10

Biotype
protein_coding
Gene Symbol
Chrna9
Description
cholinergic receptor, nicotinic, alpha polypeptide 9 [Source:MGI Symbol;Acc:MGI:1202403]
Coordinates
chr5:65934921-65977326:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
169
chr5:65938089-65938257
+
37.63
25.21
0
Exon Skipping
126
chr5:65941992-65942117
+
12.73
4.63
0
Exon Skipping
95
chr5:65935402-65935496
+
41.13
25.4
0
Intron Retention
270
chr5:65967512-65967781
+
16.49
69.7
0
Intron Retention
5357
chr5:65971349-65976705
+
11.02
44.38
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000174343 CHRNA9 1-to-1
Human hg19 ENSG00000174343 CHRNA9 1-to-1
Rat rn6 ENSRNOG00000002484 Chrna9 1-to-1
Cow bosTau6 ENSBTAG00000015252 CHRNA9 1-to-1
Chicken galGal4 ENSGALG00000014268 CHRNA9 1-to-1
Chicken galGal3 ENSGALG00000014268 ACHA9_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000054680 chrna9 1-to-2
Zebrafish danRer10 ENSDARG00000099181 CHRNA9 (2 of 2) 1-to-2