Special

ENSMUSG00000052533 @ mm10

Biotype
protein_coding
Gene Symbol
Nup188
Description
nucleoporin 188 [Source:MGI Symbol;Acc:MGI:2446190]
Coordinates
chr2:30286397-30344266:+
Assembly
mm10
Other assemblies
mm9

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
254
chr2:30303660-30303913
+
5.14
25.37
0
Intron Retention
124
chr2:30325349-30325472
+
3.96
100
0
Intron Retention
869
chr2:30326579-30327447
+
4.89
75.07
0
Intron Retention
680
chr2:30339909-30340588
+
2.17
56.74
0
Intron Retention
112
chr2:30343349-30343460
+
5.54
59.9
0
Intron Retention
111
chr2:30343591-30343701
+
5.13
51.82
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000095319 NUP188 1-to-2
Human hg19 ENSG00000095319 NUP188 1-to-2
Human hg19 ENSG00000251184 RP11-101E3.4 1-to-2
Rat rn6 ENSRNOG00000025185 Nup188 1-to-1
Cow bosTau6 ENSBTAG00000010613 1-to-1
Chicken galGal4 ENSGALG00000004548 NUP188 2-to-1
Chicken galGal3 ENSGALG00000004548 NUP188 1-to-1
Zebrafish danRer10 ENSDARG00000030022 nup188 2-to-1
Fruitfly dm6 FBgn0033766 CG8771 2-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"