Special

ENSMUSG00000054672 @ mm10

Biotype
protein_coding
Gene Symbol
5830411N06Rik
Description
RIKEN cDNA 5830411N06 gene [Source:MGI Symbol;Acc:MGI:2443685]
Coordinates
chr7:140247284-140300736:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
142
chr7:140273992-140274133
+
11.38
11.05
0
Intron Retention
255
chr7:140298105-140298359
+
18.71
25.08
0
Intron Retention
140
chr7:140296146-140296285
+
56.45
32.15
0
Intron Retention
81
chr7:140296604-140296684
+
37.08
43.07
0
Intron Retention
76
chr7:140297000-140297075
+
18.41
18.14
0
Intron Retention
866
chr7:140294974-140295839
+
55.2
45.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000214279 SCART1 2-to-1
Human hg19 ENSG00000214279 RP11-108K14.4 2-to-1
Rat rn6 ENSRNOG00000036647 Olr292 1-to-1
Chicken galGal4 ENSGALG00000002213 3-to-5
Chicken galGal4 ENSGALG00000002939 3-to-5
Chicken galGal4 ENSGALG00000011081 3-to-5
Chicken galGal4 ENSGALG00000013442 3-to-5
Chicken galGal4 ENSGALG00000014720 CD163L1 3-to-5
Chicken galGal3 ENSGALG00000013442 2-to-2
Chicken galGal3 ENSGALG00000014720 2-to-2
Chicken galGal3 ENSGALG00000002213 3-to-5
Chicken galGal3 ENSGALG00000002939 3-to-5
Chicken galGal3 ENSGALG00000011081 3-to-5
Zebrafish danRer10 ENSDARG00000094603 si:dkey-21h14.12 3-to-11
Zebrafish danRer10 ENSDARG00000096047 si:dkey-21h14.3 3-to-11
Zebrafish danRer10 ENSDARG00000096156 si:dkey-21h14.11 3-to-11
Zebrafish danRer10 ENSDARG00000096184 si:dkey-21h14.14 3-to-11
Zebrafish danRer10 ENSDARG00000096187 si:dkey-21h14.10 3-to-11