Special

ENSMUSG00000070332 @ mm10

Biotype
protein_coding
Gene Symbol
Trim80
Description
tripartite motif-containing 80 [Source:MGI Symbol;Acc:MGI:3588186]
Coordinates
chr11:115440545-115448270:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
100
chr11:115440607-115440706
+
45.48
98.99
0
Intron Retention
3270
chr11:115441746-115445015
+
45.94
99.8
0
Intron Retention
199
chr11:115445112-115445310
+
50.38
97
0
Intron Retention
861
chr11:115445545-115446405
+
20.02
95.6
0
Intron Retention
189
chr11:115446569-115446757
+
49.94
99.64
0
Intron Retention
843
chr11:115446821-115447663
+
19.46
71.09
0
Intron Retention
330
chr11:115440751-115441080
+
36.97
96.77
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Rat rn6 ENSRNOG00000028812 Trim80 1-to-1
Cow bosTau6 ENSBTAG00000026645 2-to-1
Chicken galGal3 ENSGALG00000001206 2-to-1
Zebrafish danRer10 ENSDARG00000039852 si:ch1073-460d17.3 2-to-79
Zebrafish danRer10 ENSDARG00000075355 ftr35 2-to-79
Zebrafish danRer10 ENSDARG00000076019 CU571066.1 2-to-79
Zebrafish danRer10 ENSDARG00000089388 ftr37 2-to-79
Zebrafish danRer10 ENSDARG00000090431 ftr04 2-to-79