FBgn0000015 @ dm6
Biotype
protein_coding
Gene Symbol
Abd-B
Description
The gene Abdominal B is referred to in FlyBase by the symbol DmelAbd-B (CG11648, FBgn0000015). It is a protein_coding_gene from Dmel. It has 11 annotated transcripts and 11 polypeptides (4 unique). Gene sequence location is 3R:16927212..16972236. Its molecular function is described by: DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding; transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 25 unique terms, many of which group under: insemination; spiracle morphogenesis, open tracheal system; genital disc anterior/posterior pattern formation; positive regulation of transcription, DNA-templated; gland development. 237 alleles are reported. The phenotypes of these alleles manifest in: imaginal tissue; presumptive embryonic/larval system; non-connected developing system; male accessory gland secondary cell; imaginal disc primordium. The phenotypic classes of alleles include: cell number defective; sterile; increased mortality; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed at stages throughout embryogenesis.
Coordinates
chr3R:16927210-16972236:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000123364 | HOXC13 | 1-to-17 |
Human | hg38 | ENSG00000123388 | HOXC11 | 1-to-17 |
Human | hg38 | ENSG00000128709 | HOXD9 | 1-to-17 |
Human | hg38 | ENSG00000253293 | HOXA10 | 1-to-17 |
Human | hg19 | ENSG00000123364 | HOXC13 | 1-to-17 |
Human | hg19 | ENSG00000123388 | HOXC11 | 1-to-17 |
Human | hg19 | ENSG00000128709 | HOXD9 | 1-to-17 |
Human | hg19 | ENSG00000253293 | HOXA10 | 1-to-17 |
Mouse | mm10 | ENSMUSG00000001819 | Hoxd13 | 1-to-16 |
Mouse | mm10 | ENSMUSG00000020875 | Hoxb9 | 1-to-16 |
Mouse | mm10 | ENSMUSG00000038203 | Hoxa13 | 1-to-16 |
Mouse | mm10 | ENSMUSG00000049604 | Hoxb13 | 1-to-16 |
Mouse | mm10 | ENSMUSG00000050368 | Hoxd10 | 1-to-16 |
Mouse | mm9 | ENSMUSG00000001819 | Hoxd13 | 1-to-16 |
Mouse | mm9 | ENSMUSG00000020875 | Hoxb9 | 1-to-16 |
Mouse | mm9 | ENSMUSG00000038203 | Hoxa13 | 1-to-16 |
Mouse | mm9 | ENSMUSG00000049604 | Hoxb13 | 1-to-16 |
Mouse | mm9 | ENSMUSG00000050368 | Hoxd10 | 1-to-16 |
Rat | rn6 | ENSRNOG00000001580 | Hoxd9 | 1-to-23 |
Rat | rn6 | ENSRNOG00000001588 | Hoxd13 | 1-to-23 |
Rat | rn6 | ENSRNOG00000007573 | Hoxb9 | 1-to-23 |
Rat | rn6 | ENSRNOG00000051472 | Hoxd11 | 1-to-23 |
Rat | rn6 | ENSRNOG00000061531 | Hoxa11 | 1-to-23 |
Cow | bosTau6 | ENSBTAG00000004313 | HOXD13 | 1-to-16 |
Cow | bosTau6 | ENSBTAG00000004314 | HOXD12 | 1-to-16 |
Cow | bosTau6 | ENSBTAG00000005606 | HOXC9 | 1-to-16 |
Cow | bosTau6 | ENSBTAG00000014735 | HOXA13 | 1-to-16 |
Cow | bosTau6 | ENSBTAG00000025009 | HOXB9 | 1-to-16 |
Chicken | galGal4 | ENSGALG00000001276 | HOXB9 | 1-to-16 |
Chicken | galGal4 | ENSGALG00000009270 | HOXD10 | 1-to-16 |
Chicken | galGal4 | ENSGALG00000028983 | 1-to-16 | |
Chicken | galGal3 | ENSGALG00000001276 | E1BQM6_CHICK | 1-to-16 |
Chicken | galGal3 | ENSGALG00000009270 | F1NZJ4_CHICK | 1-to-16 |
Zebrafish | danRer10 | ENSDARG00000011579 | hoxb10a | 1-to-24 |
Zebrafish | danRer10 | ENSDARG00000031337 | hoxa10b | 1-to-24 |
Zebrafish | danRer10 | ENSDARG00000057859 | hoxd10a | 1-to-24 |
Zebrafish | danRer10 | ENSDARG00000059274 | hoxd9a | 1-to-24 |
Zebrafish | danRer10 | ENSDARG00000105013 | hoxa9a | 1-to-24 |