FBgn0000251 @ dm6
Biotype
protein_coding
Gene Symbol
cad
Description
The gene caudal is referred to in FlyBase by the symbol Dmelcad (CG1759, FBgn0000251). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is 2L:20770731..20783135. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity. It is involved in the biological process described with 17 unique terms, many of which group under: gastrulation; embryo development; gastrulation involving germ band extension; regulation of antimicrobial peptide production; genital disc development. 34 alleles are reported. The phenotypes of these alleles manifest in: developing embryonic structure; embryonic/larval hindgut; adult thoracic segment; periphallic sclerite; sensillum. The phenotypic classes of alleles include: phenotype; increased mortality; increased mortality during development; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chr2L:20770731-20783135:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000113722 | CDX1 | 1-to-3 |
| Human | hg38 | ENSG00000131264 | CDX4 | 1-to-3 |
| Human | hg38 | ENSG00000165556 | CDX2 | 1-to-3 |
| Human | hg19 | ENSG00000113722 | CDX1 | 1-to-3 |
| Human | hg19 | ENSG00000131264 | CDX4 | 1-to-3 |
| Human | hg19 | ENSG00000165556 | CDX2 | 1-to-3 |
| Mouse | mm10 | ENSMUSG00000024619 | Cdx1 | 1-to-3 |
| Mouse | mm10 | ENSMUSG00000029646 | Cdx2 | 1-to-3 |
| Mouse | mm10 | ENSMUSG00000031326 | Cdx4 | 1-to-3 |
| Mouse | mm9 | ENSMUSG00000024619 | Cdx1 | 1-to-3 |
| Mouse | mm9 | ENSMUSG00000029646 | Cdx2 | 1-to-3 |
| Mouse | mm9 | ENSMUSG00000031326 | Cdx4 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000002974 | Cdx4 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000032759 | Cdx2 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000060334 | Cdx1 | 1-to-3 |
| Cow | bosTau6 | ENSBTAG00000001726 | CDX4 | 1-to-3 |
| Cow | bosTau6 | ENSBTAG00000001819 | CDX2 | 1-to-3 |
| Cow | bosTau6 | ENSBTAG00000012014 | CDX1 | 1-to-3 |
| Chicken | galGal4 | ENSGALG00000005679 | CDX-A | 1-to-4 |
| Chicken | galGal4 | ENSGALG00000007656 | 1-to-4 | |
| Chicken | galGal4 | ENSGALG00000007657 | CDXB | 1-to-4 |
| Chicken | galGal3 | ENSGALG00000005679 | CDX1_CHICK | 1-to-4 |
| Chicken | galGal3 | ENSGALG00000007656 | E1C7F6_CHICK | 1-to-4 |
| Chicken | galGal3 | ENSGALG00000007657 | F1NHM4_CHICK | 1-to-4 |
| Zebrafish | danRer10 | ENSDARG00000036292 | cdx4 | 1-to-2 |
| Zebrafish | danRer10 | ENSDARG00000058999 | cdx1b | 1-to-2 |