Special

FBgn0000317 @ dm6

Biotype
protein_coding
Gene Symbol
ck
Description
The gene crinkled is referred to in FlyBase by the symbol Dmelck (CG7595, FBgn0000317). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (1 unique). Gene sequence location is 2L:15044963..15057862. Its molecular function is described by 6 unique terms, many of which group under: protein binding; hydrolase activity; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; cytoskeletal protein binding; pyrophosphatase activity. It is involved in the biological process described with 12 unique terms, many of which group under: actin filament-based movement; chaeta development; organelle organization; cuticle development involved in chitin-based cuticle molting cycle; hair cell differentiation. 49 alleles are reported. The phenotypes of these alleles manifest in: cellular anatomical entity; male-specific anatomical entity; cell projection; portion of tissue; germline cell. The phenotypic classes of alleles include: lethal; phenotype; lethal - all die before end of P-stage; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during early larval stages.
Coordinates
chr2L:15044963-15057862:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
23.98
38.06
0
Alternative 3'ss
5
chr2L:15053518-15053522
-
76.02
38.06
0
Alternative 5'ss
0
NA
-
62.55
45.7
0
Alternative 5'ss
163
chr2L:15057505-15057667
-
37.45
45.7
0
Intron Retention
4145
chr2L:15053523-15057667
-
20.14
65.93
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000137474 MYO7A 1-to-2
Human hg38 ENSG00000169994 MYO7B 1-to-2
Human hg19 ENSG00000137474 MYO7A 1-to-2
Human hg19 ENSG00000169994 MYO7B 1-to-2
Mouse mm10 ENSMUSG00000024388 Myo7b 1-to-2
Mouse mm10 ENSMUSG00000030761 Myo7a 1-to-2
Mouse mm9 ENSMUSG00000024388 Myo7b 1-to-2
Mouse mm9 ENSMUSG00000030761 Myo7a 1-to-2
Rat rn6 ENSRNOG00000013641 Myo7a 2-to-2
Rat rn6 ENSRNOG00000015035 Myo7b 2-to-2
Cow bosTau6 ENSBTAG00000003955 MYO7A 1-to-2
Cow bosTau6 ENSBTAG00000039803 MYO7B 1-to-2
Chicken galGal4 ENSGALG00000001936 MYO7B 1-to-2
Chicken galGal3 ENSGALG00000001936 MYO7B 1-to-2
Zebrafish danRer10 ENSDARG00000044441 MYO7B (1 of 2) 1-to-4
Zebrafish danRer10 ENSDARG00000044632 myo7ab 1-to-4
Zebrafish danRer10 ENSDARG00000077201 myo7bb 1-to-4
Zebrafish danRer10 ENSDARG00000099871 myo7aa 1-to-4