FBgn0001147 @ dm6
Biotype
protein_coding
Gene Symbol
gsb-n
Description
The gene gooseberry-neuro is referred to in FlyBase by the symbol Dmelgsb-n (CG2692, FBgn0001147). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2R:25040383..25052331. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding; DNA binding. It is involved in the biological process described with: segment polarity determination; neurogenesis; regulation of transcription, DNA-templated. 27 alleles are reported. The phenotypes of these alleles manifest in: Notch OFF hemilineage primary neuron; Keilin's organ; epidermis; abdominal 6 ventral denticle belt; developing embryonic structure. The phenotypic classes of alleles include: partially lethal; partially lethal - majority live; pair rule phenotype; visible; partially lethal - majority die; wild-type. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 06-18 hour embryonic stages.
Coordinates
chr2R:25040383-25052331:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000009709 | PAX7 | 3-to-2 |
| Human | hg38 | ENSG00000135903 | PAX3 | 3-to-2 |
| Human | hg19 | ENSG00000009709 | PAX7 | 3-to-2 |
| Human | hg19 | ENSG00000135903 | PAX3 | 3-to-2 |
| Mouse | mm10 | ENSMUSG00000004872 | Pax3 | 3-to-2 |
| Mouse | mm10 | ENSMUSG00000028736 | Pax7 | 3-to-2 |
| Mouse | mm9 | ENSMUSG00000004872 | Pax3 | 3-to-2 |
| Mouse | mm9 | ENSMUSG00000028736 | Pax7 | 3-to-2 |
| Rat | rn6 | ENSRNOG00000013670 | Pax3 | 3-to-2 |
| Rat | rn6 | ENSRNOG00000018739 | Pax7 | 3-to-2 |
| Cow | bosTau6 | ENSBTAG00000009950 | PAX3 | 3-to-2 |
| Cow | bosTau6 | ENSBTAG00000014967 | PAX7 | 3-to-2 |
| Zebrafish | danRer10 | ENSDARG00000010192 | pax3a | 3-to-4 |
| Zebrafish | danRer10 | ENSDARG00000028348 | pax3b | 3-to-4 |
| Zebrafish | danRer10 | ENSDARG00000070818 | pax7b | 3-to-4 |
| Zebrafish | danRer10 | ENSDARG00000100398 | pax7a | 3-to-4 |