Special

FBgn0003353 @ dm6

Biotype
protein_coding
Gene Symbol
sei
Description
The gene seizure is referred to in FlyBase by the symbol Dmelsei (CG3182, FBgn0003353). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (1 unique). Gene sequence location is 2R:24047411..24053035. Its molecular function is described by: voltage-gated potassium channel activity; voltage-gated cation channel activity. It is involved in the biological process described with: regulation of membrane potential; potassium ion transport; sensory perception of sound; potassium ion transmembrane transport. 24 alleles are reported. The phenotypes of these alleles manifest in: organelle; peripheral nervous system; myofibril; cellular anatomical entity; cytoplasm. The phenotypic classes of alleles include: phenotype; chemical resistant; viable; behavior defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 00-12 hour embryonic stages, at stages throughout the pupal period, in adult female stages.
Coordinates
chr2R:24047411-24053035:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
14.41
22.9
0
Alternative 5'ss
36
chr2R:24049248-24049283
+
85.59
22.9
0
Intron Retention
175
chr2R:24049248-24049422
+
60.18
28.09
0
Intron Retention
52
chr2R:24052750-24052801
+
24.34
72.31
0
Intron Retention
52
chr2R:24050607-24050658
+
5.51
51.79
0
Intron Retention
62
chr2R:24050730-24050791
+
5.1
37.8
0
Intron Retention
60
chr2R:24050903-24050962
+
10.64
52.48
0
Intron Retention
56
chr2R:24051118-24051173
+
26.89
84.3
0
Intron Retention
62
chr2R:24051295-24051356
+
15.15
68.65
0
Intron Retention
63
chr2R:24051478-24051540
+
16.56
69.07
0
Intron Retention
57
chr2R:24051660-24051716
+
7.57
44.21
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000055118 KCNH2 1-to-3
Human hg38 ENSG00000173826 KCNH6 1-to-3
Human hg38 ENSG00000184611 KCNH7 1-to-3
Human hg19 ENSG00000055118 KCNH2 1-to-3
Human hg19 ENSG00000173826 KCNH6 1-to-3
Human hg19 ENSG00000184611 KCNH7 1-to-3
Mouse mm10 ENSMUSG00000001901 Kcnh6 1-to-3
Mouse mm10 ENSMUSG00000038319 Kcnh2 1-to-3
Mouse mm10 ENSMUSG00000059742 Kcnh7 1-to-3
Mouse mm9 ENSMUSG00000001901 Kcnh6 1-to-3
Mouse mm9 ENSMUSG00000038319 Kcnh2 1-to-3
Mouse mm9 ENSMUSG00000059742 Kcnh7 1-to-3
Rat rn6 ENSRNOG00000007528 Kcnh7 1-to-2
Rat rn6 ENSRNOG00000009872 Kcnh2 1-to-2
Cow bosTau6 ENSBTAG00000001899 KCNH7 1-to-3
Cow bosTau6 ENSBTAG00000004078 KCNH2 1-to-3
Cow bosTau6 ENSBTAG00000016613 KCNH6 1-to-3
Chicken galGal4 ENSGALG00000000505 1-to-3
Chicken galGal3 ENSGALG00000000505 KCNH6 1-to-3
Zebrafish danRer10 ENSDARG00000001803 kcnh6a 1-to-5
Zebrafish danRer10 ENSDARG00000010296 kcnh6b 1-to-5
Zebrafish danRer10 ENSDARG00000029881 kcnh2a 1-to-5
Zebrafish danRer10 ENSDARG00000060053 KCNH2 (2 of 2) 1-to-5
Zebrafish danRer10 ENSDARG00000062687 KCNH7 1-to-5