Special

FBgn0003654 @ dm6

Biotype
protein_coding
Gene Symbol
sw
Description
The gene short wing is referred to in FlyBase by the symbol Dmelsw (CG18000, FBgn0003654). It is a protein_coding_gene from Dmel. It has 16 annotated transcripts and 16 polypeptides (12 unique). Gene sequence location is X:20227961..20236382. Its molecular function is described by: dynein light chain binding; dynactin binding; dynein heavy chain binding. It is involved in the biological process described with 11 unique terms, many of which group under: cellular process; organelle organization; microtubule-based process; movement of cell or subcellular component; protein localization to organelle. 37 alleles are reported. The phenotypes of these alleles manifest in: anterior-posterior subdivision of organism; organism subdivision; tagma; anatomical structure; organ system subdivision. The phenotypic classes of alleles include: lethal - all die before end of larval stage; increased mortality during development; increased mortality; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed in adult male stages.
Coordinates
chrX:20227961-20236382:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
9
chrX:20230585-20230593
-
20.98
48.95
0
Alternative 3'ss
12
chrX:20230585-20230596
-
25.39
61.24
0
Alternative 3'ss
33
chrX:20230585-20230617
-
53.03
95
0
Exon Skipping
128
chrX:20234775-20234902
-
99.86
2.9
1
Exon Skipping
48
chrX:20232117-20232164
-
42.09
97.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000077380 DYNC1I2 5-to-2
Human hg38 ENSG00000158560 DYNC1I1 5-to-2
Human hg19 ENSG00000077380 DYNC1I2 5-to-2
Human hg19 ENSG00000158560 DYNC1I1 5-to-2
Mouse mm10 ENSMUSG00000027012 Dync1i2 5-to-2
Mouse mm10 ENSMUSG00000029757 Dync1i1 5-to-2
Mouse mm9 ENSMUSG00000027012 Dync1i2 5-to-2
Mouse mm9 ENSMUSG00000029757 Dync1i1 5-to-2
Rat rn6 ENSRNOG00000009700 Dync1i1 8-to-2
Rat rn6 ENSRNOG00000009781 Dync1i2 8-to-2
Cow bosTau6 ENSBTAG00000002646 DYNC1I2 5-to-2
Cow bosTau6 ENSBTAG00000027134 DYNC1I1 5-to-2
Chicken galGal4 ENSGALG00000009551 DYNC1I2 5-to-2
Chicken galGal4 ENSGALG00000009722 DYNC1I1 5-to-2
Chicken galGal3 ENSGALG00000009551 DYNC1I2 5-to-2
Chicken galGal3 ENSGALG00000009722 DYNC1I1 5-to-2
Zebrafish danRer10 ENSDARG00000060948 dync1i1 5-to-4
Zebrafish danRer10 ENSDARG00000078386 dync1i2a 5-to-4
Zebrafish danRer10 ENSDARG00000098090 DYNC1I1 (2 of 2) 5-to-4
Zebrafish danRer10 ENSDARG00000103195 dync1i2b 5-to-4