FBgn0003742 @ dm6
Biotype
protein_coding
Gene Symbol
tra2
Description
The gene transformer 2 is referred to in FlyBase by the symbol Dmel ra2 (CG10128, FBgn0003742). It is a protein_coding_gene from Dmel. It has 8 annotated transcripts and 8 polypeptides (4 unique). Gene sequence location is 2R:14602004..14604337. Its molecular function is described by: identical protein binding; RNA binding; mRNA binding; pre-mRNA binding; protein binding. It is involved in the biological process described with 12 unique terms, many of which group under: developmental process; reproduction; developmental process involved in reproduction; cellular component organization or biogenesis; male somatic sex determination. 70 alleles are reported. The phenotypes of these alleles manifest in: abdominal sternite 6; female genital disc; segment of leg; female genitalia; adult prothoracic segment. The phenotypic classes of alleles include: phenotype; fertile; visible; sterile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during early pupal stages.
Coordinates
chr2R:14602004-14604337:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000136527 | TRA2B | 1-to-14 |
| Human | hg38 | ENSG00000169800 | RBMY1F | 1-to-14 |
| Human | hg38 | ENSG00000175718 | RBMXL3 | 1-to-14 |
| Human | hg38 | ENSG00000226941 | RBMY1J | 1-to-14 |
| Human | hg38 | ENSG00000242875 | RBMY1B | 1-to-14 |
| Human | hg19 | ENSG00000136527 | TRA2B | 1-to-14 |
| Human | hg19 | ENSG00000169800 | RBMY1F | 1-to-14 |
| Human | hg19 | ENSG00000175718 | RBMXL3 | 1-to-14 |
| Human | hg19 | ENSG00000226941 | RBMY1J | 1-to-14 |
| Human | hg19 | ENSG00000242875 | RBMY1B | 1-to-14 |
| Mouse | mm10 | ENSMUSG00000022858 | Tra2b | 1-to-17 |
| Mouse | mm10 | ENSMUSG00000029817 | Tra2a | 1-to-17 |
| Mouse | mm10 | ENSMUSG00000037070 | Rbmxl1 | 1-to-17 |
| Mouse | mm10 | ENSMUSG00000045193 | Cirbp | 1-to-17 |
| Mouse | mm10 | ENSMUSG00000101667 | Gm29289 | 1-to-17 |
| Mouse | mm9 | ENSMUSG00000022858 | Tra2b | 1-to-17 |
| Mouse | mm9 | ENSMUSG00000029817 | Tra2a | 1-to-17 |
| Mouse | mm9 | ENSMUSG00000037070 | Rbmxrt | 1-to-17 |
| Mouse | mm9 | ENSMUSG00000045193 | Cirbp | 1-to-17 |
| Rat | rn6 | ENSRNOG00000000866 | Rbmx | 1-to-9 |
| Rat | rn6 | ENSRNOG00000005387 | Rbm3 | 1-to-9 |
| Rat | rn6 | ENSRNOG00000005867 | AABR07061152.1 | 1-to-9 |
| Rat | rn6 | ENSRNOG00000009156 | Tra2a | 1-to-9 |
| Rat | rn6 | ENSRNOG00000012138 | Rbmxl1 | 1-to-9 |
| Cow | bosTau6 | ENSBTAG00000001697 | TRA2B | 1-to-6 |
| Cow | bosTau6 | ENSBTAG00000007480 | CIRBP | 1-to-6 |
| Cow | bosTau6 | ENSBTAG00000012622 | TRA2A | 1-to-6 |
| Cow | bosTau6 | ENSBTAG00000025848 | RBM3 | 1-to-6 |
| Cow | bosTau6 | ENSBTAG00000047652 | RBMX | 1-to-6 |
| Chicken | galGal4 | ENSGALG00000006457 | RBMX | 1-to-5 |
| Chicken | galGal4 | ENSGALG00000006531 | TRA2B | 1-to-5 |
| Chicken | galGal4 | ENSGALG00000010973 | TRA2A | 1-to-5 |
| Chicken | galGal3 | ENSGALG00000006457 | 1-to-5 | |
| Chicken | galGal3 | ENSGALG00000006531 | Q9DDU8_CHICK | 1-to-5 |
| Chicken | galGal3 | ENSGALG00000010973 | TRA2A | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000002168 | tra2b | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000007863 | tra2a | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000013351 | cirbpb | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000014244 | rbmx | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000103672 | cirbpa | 1-to-5 |