FBgn0010399 @ dm6
Biotype
protein_coding
Gene Symbol
Nmdar1
Description
The gene NMDA receptor 1 is referred to in FlyBase by the symbol DmelNmdar1 (CG2902, FBgn0010399). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 3R:5508842..5523328. Its molecular function is described by: NMDA glutamate receptor activity; signaling receptor activity; ligand-gated ion channel activity. It is involved in the biological process described with 12 unique terms, many of which group under: nervous system process; system process; regulation of biological quality; sensory perception of touch; response to external stimulus. 36 alleles are reported. The phenotypes of these alleles manifest in: larval dorsal multidendritic neuron ddaA; sensory dendrite. The phenotypic classes of alleles include: phenotype; neuroanatomy defective; partially lethal; behavior defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages.
Coordinates
chr3R:5508842-5523328:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000176884 | GRIN1 | 1-to-1 |
| Human | hg19 | ENSG00000176884 | GRIN1 | 1-to-1 |
| Mouse | mm10 | ENSMUSG00000026959 | Grin1 | 1-to-1 |
| Mouse | mm9 | ENSMUSG00000026959 | Grin1 | 1-to-1 |
| Rat | rn6 | ENSRNOG00000011726 | Grin1 | 1-to-1 |
| Cow | bosTau6 | ENSBTAG00000047202 | GRIN1 | 1-to-1 |
| Chicken | galGal4 | ENSGALG00000008898 | GRIN1 | 1-to-1 |
| Chicken | galGal3 | ENSGALG00000008898 | Q6R6I2_CHICK | 1-to-1 |
| Zebrafish | danRer10 | ENSDARG00000025728 | grin1b | 1-to-2 |
| Zebrafish | danRer10 | ENSDARG00000027828 | grin1a | 1-to-2 |