Special

ENSBTAG00000047202 @ bosTau6

Biotype
protein_coding
Gene Symbol
GRIN1
Description
glutamate receptor, ionotropic, N-methyl D-aspartate 1 [Source:HGNC Symbol;Acc:HGNC:4584]
Coordinates
chr11:105922299-105945800:-
Assembly
bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
2.08
4
2
Alternative 3'ss
3
chr11:105922534-105922536
-
97.92
4
2
Exon Skipping
217
chr11:105922684-105922900
-
23.31
50.5
0
Exon Skipping
111
chr11:105925760-105925870
-
38.2
73.85
6
Exon Skipping
63
chr11:105938304-105938366
-
24.39
31.9
10
Intron Retention
89
chr11:105929633-105929721
-
47.16
99.89
0
Intron Retention
184
chr11:105929321-105929504
-
62.17
99.44
0
Intron Retention
76
chr11:105929080-105929155
-
46.84
99.82
0
Intron Retention
72
chr11:105928706-105928777
-
47.54
99.27
0
Intron Retention
115
chr11:105928442-105928556
-
54.19
99.82
0
Intron Retention
572
chr11:105927712-105928283
-
21.84
95.96
0
Intron Retention
107
chr11:105927217-105927323
-
28.77
83.57
0
Intron Retention
1200
chr11:105925871-105927070
-
41.71
95.71
0
Intron Retention
3223
chr11:105922537-105925759
-
64.63
81.39
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000176884 GRIN1 1-to-1
Human hg19 ENSG00000176884 GRIN1 1-to-1
Mouse mm10 ENSMUSG00000026959 Grin1 1-to-1
Mouse mm9 ENSMUSG00000026959 Grin1 1-to-1
Rat rn6 ENSRNOG00000011726 Grin1 1-to-1
Chicken galGal4 ENSGALG00000008898 GRIN1 1-to-1
Chicken galGal3 ENSGALG00000008898 Q6R6I2_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000025728 grin1b 1-to-2
Zebrafish danRer10 ENSDARG00000027828 grin1a 1-to-2
Fruitfly dm6 FBgn0010399 Nmdar1 1-to-1
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