Special

FBgn0011300 @ dm6

Biotype
protein_coding
Gene Symbol
babo
Description
The gene baboon is referred to in FlyBase by the symbol Dmel�abo (CG8224, FBgn0011300). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (3 unique). Gene sequence location is 2R:8952339..8962796. Its molecular function is described by 6 unique terms, many of which group under: protein kinase activity; catalytic activity; phosphotransferase activity, alcohol group as acceptor; kinase activity; catalytic activity, acting on a protein. It is involved in the biological process described with 22 unique terms, many of which group under: cellular protein metabolic process; cell projection organization; primary metabolic process; brain development; response to abiotic stimulus. 51 alleles are reported. The phenotypes of these alleles manifest in: membrane-bounded organelle; vacuole; embryonic/larval brain; larval thorax; plasma membrane bounded cell projection. The phenotypic classes of alleles include: neuroanatomy defective; phototaxis defective; increased mortality; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult female stages.
Coordinates
chr2R:8952339-8962796:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
209
chr2R:8954959-8955167
+
5.32
68.42
0
Exon Skipping
146
chr2R:8955713-8955858
+
49.64
100
0
Exon Skipping
128
chr2R:8957029-8957156
+
39.99
100
0
Intron Retention
861
chr2R:8954852-8955712
+
40.76
99.66
0
Intron Retention
3248
chr2R:8955859-8959106
+
28.64
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000106799 TGFBR1 1-to-3
Human hg38 ENSG00000123612 ACVR1C 1-to-3
Human hg38 ENSG00000135503 ACVR1B 1-to-3
Human hg19 ENSG00000106799 TGFBR1 1-to-3
Human hg19 ENSG00000123612 ACVR1C 1-to-3
Human hg19 ENSG00000135503 ACVR1B 1-to-3
Mouse mm10 ENSMUSG00000000532 Acvr1b 1-to-3
Mouse mm10 ENSMUSG00000007613 Tgfbr1 1-to-3
Mouse mm10 ENSMUSG00000026834 Acvr1c 1-to-3
Mouse mm9 ENSMUSG00000000532 Acvr1b 1-to-3
Mouse mm9 ENSMUSG00000007613 Tgfbr1 1-to-3
Mouse mm9 ENSMUSG00000026834 Acvr1c 1-to-3
Rat rn6 ENSRNOG00000004828 Acvr1c 1-to-4
Rat rn6 ENSRNOG00000006934 Acvr1b 1-to-4
Rat rn6 ENSRNOG00000007036 Tgfbr1 1-to-4
Rat rn6 ENSRNOG00000050760 LOC103690035 1-to-4
Cow bosTau6 ENSBTAG00000013555 ACVR1B 1-to-3
Cow bosTau6 ENSBTAG00000018035 TGFBR1 1-to-3
Cow bosTau6 ENSBTAG00000019337 ACVR1C 1-to-3
Zebrafish danRer10 ENSDARG00000017494 tgfbr1a 1-to-5
Zebrafish danRer10 ENSDARG00000018968 acvr1ba 1-to-5
Zebrafish danRer10 ENSDARG00000042259 tgfbr1b 1-to-5
Zebrafish danRer10 ENSDARG00000052142 acvr1bb 1-to-5
Zebrafish danRer10 ENSDARG00000086172 ACVR1C 1-to-5