Special

FBgn0015773 @ dm6

Biotype
protein_coding
Gene Symbol
NetA
Description
The gene Netrin-A is referred to in FlyBase by the symbol DmelNetA (CG18657, FBgn0015773). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is X:14604012..14653928. Its molecular function is unknown. It is involved in the biological process described with 9 unique terms, many of which group under: animal organ development; cell motility; sensory organ development; tissue development; regulation of cell development. 27 alleles are reported. The phenotypes of these alleles manifest in: axon; photoreceptor cell R8 stalk; cellular anatomical entity; commissure; cell projection. The phenotypic classes of alleles include: neuroanatomy defective; oxidative stress response defective; viable; size defective; cell migration defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed at stages throughout embryogenesis.
Coordinates
chrX:14604012-14653928:-
Assembly
dm6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
41.55
89.65
0
Alternative 5'ss
4
chrX:14610435-14610438
-
58.45
89.65
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000065320 NTN1 2-to-5
Human hg38 ENSG00000142233 NTN5 2-to-5
Human hg38 ENSG00000162068 NTN3 2-to-5
Human hg38 ENSG00000162631 NTNG1 2-to-5
Human hg38 ENSG00000196358 NTNG2 2-to-5
Human hg19 ENSG00000065320 NTN1 2-to-5
Human hg19 ENSG00000142233 NTN5 2-to-5
Human hg19 ENSG00000162068 NTN3 2-to-5
Human hg19 ENSG00000162631 NTNG1 2-to-5
Human hg19 ENSG00000196358 NTNG2 2-to-5
Mouse mm10 ENSMUSG00000020902 Ntn1 2-to-5
Mouse mm10 ENSMUSG00000035513 Ntng2 2-to-5
Mouse mm10 ENSMUSG00000036473 Tbc1d24 2-to-5
Mouse mm10 ENSMUSG00000059857 Ntng1 2-to-5
Mouse mm10 ENSMUSG00000070564 Ntn5 2-to-5
Mouse mm9 ENSMUSG00000020902 Ntn1 2-to-5
Mouse mm9 ENSMUSG00000035513 Ntng2 2-to-5
Mouse mm9 ENSMUSG00000036473 Tbc1d24 2-to-5
Mouse mm9 ENSMUSG00000059857 Ntng1 2-to-5
Mouse mm9 ENSMUSG00000070564 Ntn5 2-to-5
Rat rn6 ENSRNOG00000003947 Ntn1 2-to-3
Rat rn6 ENSRNOG00000006970 Ntn3 2-to-3
Rat rn6 ENSRNOG00000021016 Ntn5 2-to-3
Cow bosTau6 ENSBTAG00000007235 NTNG2 2-to-5
Cow bosTau6 ENSBTAG00000012137 NTN1 2-to-5
Cow bosTau6 ENSBTAG00000014530 MGC139448 2-to-5
Cow bosTau6 ENSBTAG00000044132 NTN5 2-to-5
Cow bosTau6 ENSBTAG00000045625 NTN3 2-to-5
Chicken galGal4 ENSGALG00000003677 NTNG2 2-to-5
Chicken galGal4 ENSGALG00000023626 NTN1 2-to-5
Chicken galGal4 ENSGALG00000029072 NTN3 2-to-5
Chicken galGal3 ENSGALG00000003677 NTNG2 2-to-5
Chicken galGal3 ENSGALG00000023626 2-to-5
Zebrafish danRer10 ENSDARG00000014973 ntng1a 2-to-8
Zebrafish danRer10 ENSDARG00000036422 NTN5 2-to-8
Zebrafish danRer10 ENSDARG00000076748 ntn2 2-to-8
Zebrafish danRer10 ENSDARG00000077367 ntng2a 2-to-8
Zebrafish danRer10 ENSDARG00000087100 ntng2b 2-to-8
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"