Special

FBgn0027951 @ dm6

Biotype
protein_coding
Gene Symbol
MTA1-like
Description
The gene Metastasis associated 1-like is referred to in FlyBase by the symbol DmelMTA1-like (CG2244, FBgn0027951). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (4 unique). Gene sequence location is 3R:5638655..5648738. Its molecular function is described by 7 unique terms, many of which group under: binding; transcription coregulator activity; transcription regulator activity; protein binding; transcription corepressor activity. It is involved in the biological process described with: chromosome condensation; negative regulation of transcription by RNA polymerase II; heterochromatin organization involved in chromatin silencing; histone deacetylation. 17 alleles are reported. The phenotypes of these alleles manifest in: oocyte; chromosome; region; segmental subdivision of integument; cell. The phenotypic classes of alleles include: visible; partially lethal; lethal; viable; suppressor of variegation; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.
Coordinates
chr3R:5638655-5648738:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
108
chr3R:5644163-5644270
-
25.73
100
0
Intron Retention
2783
chr3R:5644271-5647053
-
10.96
98.21
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000182979 MTA1 1-to-1
Human hg19 ENSG00000182979 MTA1 1-to-1
Mouse mm10 ENSMUSG00000021144 Mta1 1-to-1
Mouse mm9 ENSMUSG00000021144 Mta1 1-to-1
Rat rn6 ENSRNOG00000019913 Mta2 1-to-1
Cow bosTau6 ENSBTAG00000047606 MTA1 1-to-1
Chicken galGal4 ENSGALG00000002803 MTA1 1-to-1
Chicken galGal3 ENSGALG00000002803 MTA1 1-to-1
Zebrafish danRer10 ENSDARG00000007198 mta1 1-to-1