FBgn0029907 @ dm6
Biotype
protein_coding
Gene Symbol
Atx-1
Description
The gene Ataxin 1 is referred to in FlyBase by the symbol DmelAtx-1 (CG4547, FBgn0029907). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is X:6823204..6824203. Its molecular function is described by: RNA binding. It is involved in the biological process described with: imaginal disc-derived wing vein specification; photoreceptor cell maintenance. 4 alleles are reported. The phenotypes of these alleles manifest in: adult metathoracic segment; wing blade; mechanosensory sensory organ; cuticle; mechanosensory chaeta. The phenotypic classes of alleles include: viable; neuroanatomy defective; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined.
Coordinates
chrX:6823204-6824203:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000124788 | ATXN1 | 1-to-2 |
| Human | hg38 | ENSG00000224470 | ATXN1L | 1-to-2 |
| Human | hg19 | ENSG00000124788 | ATXN1 | 1-to-2 |
| Human | hg19 | ENSG00000224470 | ATXN1L | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000046876 | Atxn1 | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000069895 | Atxn1l | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000046876 | Atxn1 | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000069895 | Atxn1l | 1-to-2 |
| Rat | rn6 | ENSRNOG00000016998 | Atxn1 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000037133 | AABR07003433.1 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000038766 | LOC103694328 | 1-to-3 |
| Cow | bosTau6 | ENSBTAG00000019675 | ATXN1 | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000046255 | ATXN1L | 1-to-2 |
| Chicken | galGal4 | ENSGALG00000012709 | ATXN1 | 1-to-2 |
| Chicken | galGal4 | ENSGALG00000028253 | ATXN1L | 1-to-2 |
| Chicken | galGal3 | ENSGALG00000012709 | ATXN1 | 1-to-2 |
| Zebrafish | danRer10 | ENSDARG00000060862 | atxn1b | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000061687 | atxn1a | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000086977 | atxn1l | 1-to-3 |